| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is qorA [H]
Identifier: 182678230
GI number: 182678230
Start: 1447583
End: 1448599
Strand: Direct
Name: qorA [H]
Synonym: Bind_1245
Alternate gene names: 182678230
Gene position: 1447583-1448599 (Clockwise)
Preceding gene: 182678229
Following gene: 182678232
Centisome position: 34.71
GC content: 57.13
Gene sequence:
>1017_bases ATGGCCGCGATAATTCCCGACAGGATGCGCCAGATTTATTTCGACGGGAAGGGCGGTCCCGAGGTGATCCGTGTCGGCGA GGCGGAGGTTCCGACGCCTGGTCGTGGTAAGGTCCTGATTGAGGTCGCGGCGGCGGGCATCAACCGGCCCGATTGTGTGC AGCGCGCCGGATTCTATCCGCCGCCTCCCGGTGAAAGCGAGATCCCGGGTCTCGAAGTCGCTGGCAAAATCGTCAAGCTG GGCGAGGGCGTGTCGCAATGGCAAATCGGCGATGAAGTCTGCGCTCTGCTCGGTTCTGGTGGTTATGCTGAATATGCCCT TGCGGATGCGGCTTTGTGCCTGCCGGTGCCGAAGGGTCTGAGCCTGATTGAGGCTGCCGCTCTGCCGGAAACCTATTTCA CCGTTTACGATAATGTATTCACGCGCGGCCGCTTGCAGCCGGGTGAAAATTTTCTCATCCATGGGGGTTCGAGCGGTATC GGATCGACGGCGATTCAGCTTGCCAAGCAATTTGGTGCGAAGGTTTTCACGACAGCGGGTTCGGCCGAGAAATGCGCCTT CTGCCGCACGCTCGGAGCCGACCATGCGATCGATTATAAAACCAGCGATTTCGTTGAGGAAATTCGCAAGATCACGGACA ATAAATATCCGATCGATGTGATCCTCGACATGGTCGGTGGAAGTTATATCGCCAAAAACCTCTCGCTGCTGAATTTTGAT GGACGCATGGTGCAGATCGCTTTTCTGCAATCGCCGAAAGTCGCGTCCTTCGATTTTCTGCCTCTCATGCTACGGCGCCT CACCATGACCGGTTCGACCTTGCGGGCGCGGGCGCTCGGGCAAAAGATCGAAATCGCGGAAGCCTTGCGGGAGTTGGTCT GGCCATTGCTCGATCAAGGCCTGGTCAAACCCATGGTTCATGCAACCTTTCCTCTAGAGGAAGCCCGGCAGTCGCATGAA TTGATGGAATCCTCTGCCCATCTCGGCAAAATCCTCCTTGTGACGGGCTTAGCCTGA
Upstream 100 bases:
>100_bases CGCGTCCTTGGGTTTCGGTTGAGAGAGGGGCTGGATCTTGCGAGTTCGTCATGAATGGACCAGAAAGGGGCACGGGGACA TCGATCAAGGAGGATGATTC
Downstream 100 bases:
>100_bases AAGTTTGATGTCTGTTGCGTCATCGAGCCTGTATACGATGAACCAAGGGTCACTCTCCGCGATCCTTGGTATCTGGGCAG GAAAGCAGGCTTGACGCTAA
Product: PIG3 family NAD(P)H quinone oxidoreductase
Products: NA
Alternate protein names: NADPH:quinone reductase 1; Zeta-crystallin homolog protein [H]
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MAAIIPDRMRQIYFDGKGGPEVIRVGEAEVPTPGRGKVLIEVAAAGINRPDCVQRAGFYPPPPGESEIPGLEVAGKIVKL GEGVSQWQIGDEVCALLGSGGYAEYALADAALCLPVPKGLSLIEAAALPETYFTVYDNVFTRGRLQPGENFLIHGGSSGI GSTAIQLAKQFGAKVFTTAGSAEKCAFCRTLGADHAIDYKTSDFVEEIRKITDNKYPIDVILDMVGGSYIAKNLSLLNFD GRMVQIAFLQSPKVASFDFLPLMLRRLTMTGSTLRARALGQKIEIAEALRELVWPLLDQGLVKPMVHATFPLEEARQSHE LMESSAHLGKILLVTGLA
Sequences:
>Translated_338_residues MAAIIPDRMRQIYFDGKGGPEVIRVGEAEVPTPGRGKVLIEVAAAGINRPDCVQRAGFYPPPPGESEIPGLEVAGKIVKL GEGVSQWQIGDEVCALLGSGGYAEYALADAALCLPVPKGLSLIEAAALPETYFTVYDNVFTRGRLQPGENFLIHGGSSGI GSTAIQLAKQFGAKVFTTAGSAEKCAFCRTLGADHAIDYKTSDFVEEIRKITDNKYPIDVILDMVGGSYIAKNLSLLNFD GRMVQIAFLQSPKVASFDFLPLMLRRLTMTGSTLRARALGQKIEIAEALRELVWPLLDQGLVKPMVHATFPLEEARQSHE LMESSAHLGKILLVTGLA >Mature_337_residues AAIIPDRMRQIYFDGKGGPEVIRVGEAEVPTPGRGKVLIEVAAAGINRPDCVQRAGFYPPPPGESEIPGLEVAGKIVKLG EGVSQWQIGDEVCALLGSGGYAEYALADAALCLPVPKGLSLIEAAALPETYFTVYDNVFTRGRLQPGENFLIHGGSSGIG STAIQLAKQFGAKVFTTAGSAEKCAFCRTLGADHAIDYKTSDFVEEIRKITDNKYPIDVILDMVGGSYIAKNLSLLNFDG RMVQIAFLQSPKVASFDFLPLMLRRLTMTGSTLRARALGQKIEIAEALRELVWPLLDQGLVKPMVHATFPLEEARQSHEL MESSAHLGKILLVTGLA
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI22538446, Length=330, Percent_Identity=39.0909090909091, Blast_Score=232, Evalue=4e-61, Organism=Homo sapiens, GI22538444, Length=330, Percent_Identity=39.0909090909091, Blast_Score=232, Evalue=4e-61, Organism=Homo sapiens, GI194239674, Length=329, Percent_Identity=31.306990881459, Blast_Score=155, Evalue=5e-38, Organism=Homo sapiens, GI13236495, Length=329, Percent_Identity=31.306990881459, Blast_Score=155, Evalue=5e-38, Organism=Homo sapiens, GI18379349, Length=314, Percent_Identity=31.5286624203822, Blast_Score=148, Evalue=7e-36, Organism=Homo sapiens, GI24308257, Length=343, Percent_Identity=27.1137026239067, Blast_Score=122, Evalue=3e-28, Organism=Homo sapiens, GI194239676, Length=329, Percent_Identity=27.9635258358663, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI28557745, Length=238, Percent_Identity=31.0924369747899, Blast_Score=99, Evalue=7e-21, Organism=Homo sapiens, GI41872631, Length=312, Percent_Identity=27.2435897435897, Blast_Score=96, Evalue=5e-20, Organism=Homo sapiens, GI47519420, Length=330, Percent_Identity=27.5757575757576, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI197927207, Length=198, Percent_Identity=26.7676767676768, Blast_Score=87, Evalue=2e-17, Organism=Escherichia coli, GI1790485, Length=331, Percent_Identity=33.2326283987915, Blast_Score=140, Evalue=9e-35, Organism=Escherichia coli, GI226510941, Length=332, Percent_Identity=26.5060240963855, Blast_Score=80, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17507255, Length=336, Percent_Identity=28.2738095238095, Blast_Score=115, Evalue=2e-26, Organism=Caenorhabditis elegans, GI212642053, Length=307, Percent_Identity=28.6644951140065, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI71987554, Length=356, Percent_Identity=26.685393258427, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17536829, Length=243, Percent_Identity=28.3950617283951, Blast_Score=72, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6319520, Length=341, Percent_Identity=25.8064516129032, Blast_Score=97, Evalue=5e-21, Organism=Saccharomyces cerevisiae, GI6323961, Length=360, Percent_Identity=26.3888888888889, Blast_Score=84, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6324486, Length=360, Percent_Identity=26.1111111111111, Blast_Score=84, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6323729, Length=363, Percent_Identity=25.3443526170799, Blast_Score=83, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6319621, Length=338, Percent_Identity=26.0355029585799, Blast_Score=81, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6324195, Length=296, Percent_Identity=25.6756756756757, Blast_Score=63, Evalue=6e-11, Organism=Drosophila melanogaster, GI19920632, Length=273, Percent_Identity=25.2747252747253, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI221330659, Length=273, Percent_Identity=25.2747252747253, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI24581345, Length=275, Percent_Identity=26.5454545454545, Blast_Score=90, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 36360; Mature: 36228
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAIIPDRMRQIYFDGKGGPEVIRVGEAEVPTPGRGKVLIEVAAAGINRPDCVQRAGFYP CCCCCCCHHHEEEECCCCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCHHHHHCCCCC PPPGESEIPGLEVAGKIVKLGEGVSQWQIGDEVCALLGSGGYAEYALADAALCLPVPKGL CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHEECCCCCH SLIEAAALPETYFTVYDNVFTRGRLQPGENFLIHGGSSGIGSTAIQLAKQFGAKVFTTAG HHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCEEEEECC SAEKCAFCRTLGADHAIDYKTSDFVEEIRKITDNKYPIDVILDMVGGSYIAKNLSLLNFD CHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHCCEEEECC GRMVQIAFLQSPKVASFDFLPLMLRRLTMTGSTLRARALGQKIEIAEALRELVWPLLDQG CCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHH LVKPMVHATFPLEEARQSHELMESSAHLGKILLVTGLA HHHHHHHHCCCHHHHHHHHHHHHHHHHHCEEEEEECCC >Mature Secondary Structure AAIIPDRMRQIYFDGKGGPEVIRVGEAEVPTPGRGKVLIEVAAAGINRPDCVQRAGFYP CCCCCCHHHEEEECCCCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCHHHHHCCCCC PPPGESEIPGLEVAGKIVKLGEGVSQWQIGDEVCALLGSGGYAEYALADAALCLPVPKGL CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHEECCCCCH SLIEAAALPETYFTVYDNVFTRGRLQPGENFLIHGGSSGIGSTAIQLAKQFGAKVFTTAG HHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCEEEEECC SAEKCAFCRTLGADHAIDYKTSDFVEEIRKITDNKYPIDVILDMVGGSYIAKNLSLLNFD CHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHCCEEEECC GRMVQIAFLQSPKVASFDFLPLMLRRLTMTGSTLRARALGQKIEIAEALRELVWPLLDQG CCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHH LVKPMVHATFPLEEARQSHELMESSAHLGKILLVTGLA HHHHHHHHCCCHHHHHHHHHHHHHHHHHCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 7602590 [H]