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The map label for this gene is 182678089

Identifier: 182678089

GI number: 182678089

Start: 1273365

End: 1273904

Strand: Direct

Name: 182678089

Synonym: Bind_1104

Alternate gene names: NA

Gene position: 1273365-1273904 (Clockwise)

Preceding gene: 182678086

Following gene: 182678090

Centisome position: 30.54

GC content: 57.59

Gene sequence:

>540_bases
GTGGACGCGAGAGAATCGCTCAAGCCATGGATACCGCGATTACGACGCTATGCACGCGCATTTTTGAACGGATCGCCGGG
GGCCAGCGAAACCGTCGATGATTTGGTTCATGCCGTTTTGCTTCGTGCAAGCGAAAAGAAACTCGCCGTTTCCGCAGCCA
ATGGCCTGCCATTGTTCATTCTTTTGACGCAACTCTGCCGCGAAACCTTGCATCAGAGAGCCGCCAGGCATTTTGCTGCC
TCCACTGAGGTGAATCTCCAGCCCTGGGGGGCGGCCGCGCCCGATAAGCCACACGGCTTACCGCATCGCCATGACAGTCT
CGGCCCGGCCCTCAATGCAATGAAACCTGAGGAAAAAGAGGTTCTTCTCCTTGTCGTGCTGGAAGGTTTTTCCTATGCGG
AGGTTGCGCGGATCCTGCGTATTTCACGCATGGTTTTGATGACGCGATTGGCAAAGGCCCGCCATGCTCTCGGCGAGAGT
GGCTTTACGCCGGCGCCGACGCGTCCGCCACGGCCGTCTTATCTCCGCGTCGTGAAATAA

Upstream 100 bases:

>100_bases
CGGTCCTATGGAATTAGCATTATATCTCGCCGGAAGAGCGGGAATGGATCATTTATCCATCAAAAGTAGTCCATCAAAAA
ATGGTTAAGGAGAGCGCAAG

Downstream 100 bases:

>100_bases
TTTCCTTGGATTTGGCCGTCGTGAGCGCTTCCTCGGGCATCAGTGAAGATGAATTGCATGCTTTCATCGATGGTCAGCTC
GATGGGCCGCATCGTGAAGC

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MDARESLKPWIPRLRRYARAFLNGSPGASETVDDLVHAVLLRASEKKLAVSAANGLPLFILLTQLCRETLHQRAARHFAA
STEVNLQPWGAAAPDKPHGLPHRHDSLGPALNAMKPEEKEVLLLVVLEGFSYAEVARILRISRMVLMTRLAKARHALGES
GFTPAPTRPPRPSYLRVVK

Sequences:

>Translated_179_residues
MDARESLKPWIPRLRRYARAFLNGSPGASETVDDLVHAVLLRASEKKLAVSAANGLPLFILLTQLCRETLHQRAARHFAA
STEVNLQPWGAAAPDKPHGLPHRHDSLGPALNAMKPEEKEVLLLVVLEGFSYAEVARILRISRMVLMTRLAKARHALGES
GFTPAPTRPPRPSYLRVVK
>Mature_179_residues
MDARESLKPWIPRLRRYARAFLNGSPGASETVDDLVHAVLLRASEKKLAVSAANGLPLFILLTQLCRETLHQRAARHFAA
STEVNLQPWGAAAPDKPHGLPHRHDSLGPALNAMKPEEKEVLLLVVLEGFSYAEVARILRISRMVLMTRLAKARHALGES
GFTPAPTRPPRPSYLRVVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19803; Mature: 19803

Theoretical pI: Translated: 10.98; Mature: 10.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDARESLKPWIPRLRRYARAFLNGSPGASETVDDLVHAVLLRASEKKLAVSAANGLPLFI
CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHEEECCCCCHHHH
LLTQLCRETLHQRAARHFAASTEVNLQPWGAAAPDKPHGLPHRHDSLGPALNAMKPEEKE
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHH
VLLLVVLEGFSYAEVARILRISRMVLMTRLAKARHALGESGFTPAPTRPPRPSYLRVVK
EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECC
>Mature Secondary Structure
MDARESLKPWIPRLRRYARAFLNGSPGASETVDDLVHAVLLRASEKKLAVSAANGLPLFI
CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHEEECCCCCHHHH
LLTQLCRETLHQRAARHFAASTEVNLQPWGAAAPDKPHGLPHRHDSLGPALNAMKPEEKE
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHH
VLLLVVLEGFSYAEVARILRISRMVLMTRLAKARHALGESGFTPAPTRPPRPSYLRVVK
EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA