| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182678086
Identifier: 182678086
GI number: 182678086
Start: 1266777
End: 1267706
Strand: Direct
Name: 182678086
Synonym: Bind_1101
Alternate gene names: NA
Gene position: 1266777-1267706 (Clockwise)
Preceding gene: 182678085
Following gene: 182678089
Centisome position: 30.38
GC content: 50.86
Gene sequence:
>930_bases ATGAACGATATCGCTTTATCTTCACGTGATAGACAGACGAAAACAAGCTTCGCGACAGGTAAAACCTTTTGTCTCTTTTT GTTTTGTATGAGTGGCGTGGCGATGACAGAGACAAGCCATGCCGATGACGCGCATTCCGAGGTCGATAAAAGCCAGTATT CGCTTTTCAATCCGACGCCTGATTCAGCCCTGCGCCCTTTCGTAACCGACCGGCCGACCAAAAGTAATTCACCCTACACA GTCGATGCCGGGCGCTTCCAATATGAAATGGATCTTTACAATGCTGTCACGACGAGTGCTCAAGGACAGACGACCTATTT TGGTCAGACACTCGATCCTGTCTTGAAACTCGGTCTCACCAGCCAGATCGATTTTGAATTTCAACCGGGCGGGCTTGTCA ATGCCCGTACACTCGATCACGCGAGCGGCCAGCAAGTCTCTCATCTTTATGGCTTCGGCGATACGGTCCTGCGCACCAAG TTCAATTTGTTCGGCGATGATGGCGGCGATCAGGCTATGGCGCTCATCCTTTATGGCAAGCTCCCGTCTGCCCGCGCCGG TCTTGGTAATGGCCTTGTCGAGGGCGGCGCGATCCTGCCCTGGTCGATCAGCTTACCCCAGGATTTCACGCTCCTGTTCA TGCCGGAAATCGATATTTTAAAAAATAACAATGACAGCCGTCGTCATGCGAACTTCGTCAACCTTATCAACATCAGTCAT CCGGTGCCCTTCGTTAAGGATTTGACCTTCGCTGCTGAATTTTTCACGTCCGTCAGTGCGGACAGAGGCACACCGAATAT CTATACGCTCGATTTTGCCCTTTCCTATATTGTCGTCAAGGATCTCCAACTTGATGGTGGCATCAATATTGGTCTCAATC GTGACGCCCCGAACCTTCAGCTTTATGCCGGTATCTCGCAGCGCTTTTGA
Upstream 100 bases:
>100_bases ATGGATAATTGATGTCGTCCCGATCCAGATAGAGCGCAGCACGATGAAATCATCTCATCGTGGCTTTCGACCCGGGAATG GGCGGCTCGATGGGGACAGA
Downstream 100 bases:
>100_bases GGTGACATCTTCATTCATAGCCGTGCGCGCCACCGGTCGCCAGCGCATGAATATGCGCAACGCCCCGATCTCAGATGGAG AGGCGGGGCGTATTTGTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MNDIALSSRDRQTKTSFATGKTFCLFLFCMSGVAMTETSHADDAHSEVDKSQYSLFNPTPDSALRPFVTDRPTKSNSPYT VDAGRFQYEMDLYNAVTTSAQGQTTYFGQTLDPVLKLGLTSQIDFEFQPGGLVNARTLDHASGQQVSHLYGFGDTVLRTK FNLFGDDGGDQAMALILYGKLPSARAGLGNGLVEGGAILPWSISLPQDFTLLFMPEIDILKNNNDSRRHANFVNLINISH PVPFVKDLTFAAEFFTSVSADRGTPNIYTLDFALSYIVVKDLQLDGGINIGLNRDAPNLQLYAGISQRF
Sequences:
>Translated_309_residues MNDIALSSRDRQTKTSFATGKTFCLFLFCMSGVAMTETSHADDAHSEVDKSQYSLFNPTPDSALRPFVTDRPTKSNSPYT VDAGRFQYEMDLYNAVTTSAQGQTTYFGQTLDPVLKLGLTSQIDFEFQPGGLVNARTLDHASGQQVSHLYGFGDTVLRTK FNLFGDDGGDQAMALILYGKLPSARAGLGNGLVEGGAILPWSISLPQDFTLLFMPEIDILKNNNDSRRHANFVNLINISH PVPFVKDLTFAAEFFTSVSADRGTPNIYTLDFALSYIVVKDLQLDGGINIGLNRDAPNLQLYAGISQRF >Mature_309_residues MNDIALSSRDRQTKTSFATGKTFCLFLFCMSGVAMTETSHADDAHSEVDKSQYSLFNPTPDSALRPFVTDRPTKSNSPYT VDAGRFQYEMDLYNAVTTSAQGQTTYFGQTLDPVLKLGLTSQIDFEFQPGGLVNARTLDHASGQQVSHLYGFGDTVLRTK FNLFGDDGGDQAMALILYGKLPSARAGLGNGLVEGGAILPWSISLPQDFTLLFMPEIDILKNNNDSRRHANFVNLINISH PVPFVKDLTFAAEFFTSVSADRGTPNIYTLDFALSYIVVKDLQLDGGINIGLNRDAPNLQLYAGISQRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33897; Mature: 33897
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDIALSSRDRQTKTSFATGKTFCLFLFCMSGVAMTETSHADDAHSEVDKSQYSLFNPTP CCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHEECCCCC DSALRPFVTDRPTKSNSPYTVDAGRFQYEMDLYNAVTTSAQGQTTYFGQTLDPVLKLGLT CHHCCCCCCCCCCCCCCCEEEECCCEEEEEEHHHHHHCCCCCCEEECCCHHHHHHHHCCC SQIDFEFQPGGLVNARTLDHASGQQVSHLYGFGDTVLRTKFNLFGDDGGDQAMALILYGK CEEEEEECCCCEEECEECCCCCCCCHHHHHCCCCCEEEEEEEECCCCCCCCEEEEEEEEC LPSARAGLGNGLVEGGAILPWSISLPQDFTLLFMPEIDILKNNNDSRRHANFVNLINISH CCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCEEEEECCCCCHHHCCEEEEEECCC PVPFVKDLTFAAEFFTSVSADRGTPNIYTLDFALSYIVVKDLQLDGGINIGLNRDAPNLQ CCCHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHEEEEEEEEEECCCEEEEECCCCCCEE LYAGISQRF EEECCCCCC >Mature Secondary Structure MNDIALSSRDRQTKTSFATGKTFCLFLFCMSGVAMTETSHADDAHSEVDKSQYSLFNPTP CCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHEECCCCC DSALRPFVTDRPTKSNSPYTVDAGRFQYEMDLYNAVTTSAQGQTTYFGQTLDPVLKLGLT CHHCCCCCCCCCCCCCCCEEEECCCEEEEEEHHHHHHCCCCCCEEECCCHHHHHHHHCCC SQIDFEFQPGGLVNARTLDHASGQQVSHLYGFGDTVLRTKFNLFGDDGGDQAMALILYGK CEEEEEECCCCEEECEECCCCCCCCHHHHHCCCCCEEEEEEEECCCCCCCCEEEEEEEEC LPSARAGLGNGLVEGGAILPWSISLPQDFTLLFMPEIDILKNNNDSRRHANFVNLINISH CCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCEEEEECCCCCHHHCCEEEEEECCC PVPFVKDLTFAAEFFTSVSADRGTPNIYTLDFALSYIVVKDLQLDGGINIGLNRDAPNLQ CCCHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHEEEEEEEEEECCCEEEEECCCCCCEE LYAGISQRF EEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA