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The map label for this gene is 182678047

Identifier: 182678047

GI number: 182678047

Start: 1217584

End: 1218051

Strand: Direct

Name: 182678047

Synonym: Bind_1061

Alternate gene names: NA

Gene position: 1217584-1218051 (Clockwise)

Preceding gene: 182678045

Following gene: 182678048

Centisome position: 29.2

GC content: 55.13

Gene sequence:

>468_bases
GTGAAGAAGGTACCCAACCCAATCGATTGCCATGTGGGTGGCAAGGTCCGCATGCGGCGGGTCATGTTGGGCATGAGTCA
AGAAAAATTGGGGGAAGCGCTTGGCCTGACATTCCAGCAGGTCCAAAAATACGAGAAGGGCACCAACCGTATTGGTGCCA
GCCGCTTGCAGCAGATTTCACGAATTCTCGATGTTCCGCCCGCTTTTTTCTTCGATGGAGCGCCTGCCTTTGAGGGCATG
CCGCGCCCCAATGCCCCTGTGATACCGACCGGTGACGAAGCGTCATTGTCTTATGTGACCGAATTTCTTGCCACGCCTGA
AGGCCTGCATTTGAATTTGGCTTTCCGGCGGATCAAGGATCCAAAGGTCCGCAAACGCATCGTCGAACTCGTCATGGCGA
TCGCTGGAGATGAAGAGCAGTTATTGAGCCCGGTCCCATCCGTCGGTCCTGGTTTTTCCGAAGGGTGA

Upstream 100 bases:

>100_bases
TGCCTTTTCAGCGCAAAATCAATGCTGCCTTGGTTCGTGAAGAGAAGCCGACTTGTCCAAGCTCGCTTTGGCCATGTGAT
CTGTGAGAAGGTTTTACAGC

Downstream 100 bases:

>100_bases
GAGCGCTGCCGGGAAAGGAGAAGAGCGAATAGGAGAGCTTTCGTTCTCTATAACGAACGTTTCGTCTAAATCGGCTTGAC
CAAAAGAACGATTTGCCAGA

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MKKVPNPIDCHVGGKVRMRRVMLGMSQEKLGEALGLTFQQVQKYEKGTNRIGASRLQQISRILDVPPAFFFDGAPAFEGM
PRPNAPVIPTGDEASLSYVTEFLATPEGLHLNLAFRRIKDPKVRKRIVELVMAIAGDEEQLLSPVPSVGPGFSEG

Sequences:

>Translated_155_residues
MKKVPNPIDCHVGGKVRMRRVMLGMSQEKLGEALGLTFQQVQKYEKGTNRIGASRLQQISRILDVPPAFFFDGAPAFEGM
PRPNAPVIPTGDEASLSYVTEFLATPEGLHLNLAFRRIKDPKVRKRIVELVMAIAGDEEQLLSPVPSVGPGFSEG
>Mature_155_residues
MKKVPNPIDCHVGGKVRMRRVMLGMSQEKLGEALGLTFQQVQKYEKGTNRIGASRLQQISRILDVPPAFFFDGAPAFEGM
PRPNAPVIPTGDEASLSYVTEFLATPEGLHLNLAFRRIKDPKVRKRIVELVMAIAGDEEQLLSPVPSVGPGFSEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 17000; Mature: 17000

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVPNPIDCHVGGKVRMRRVMLGMSQEKLGEALGLTFQQVQKYEKGTNRIGASRLQQIS
CCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
RILDVPPAFFFDGAPAFEGMPRPNAPVIPTGDEASLSYVTEFLATPEGLHLNLAFRRIKD
HHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEHHHHHHCCC
PKVRKRIVELVMAIAGDEEQLLSPVPSVGPGFSEG
HHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKKVPNPIDCHVGGKVRMRRVMLGMSQEKLGEALGLTFQQVQKYEKGTNRIGASRLQQIS
CCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
RILDVPPAFFFDGAPAFEGMPRPNAPVIPTGDEASLSYVTEFLATPEGLHLNLAFRRIKD
HHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEHHHHHHCCC
PKVRKRIVELVMAIAGDEEQLLSPVPSVGPGFSEG
HHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8868435 [H]