| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is expG [H]
Identifier: 182677876
GI number: 182677876
Start: 1005289
End: 1005861
Strand: Direct
Name: expG [H]
Synonym: Bind_0883
Alternate gene names: 182677876
Gene position: 1005289-1005861 (Clockwise)
Preceding gene: 182677874
Following gene: 182677877
Centisome position: 24.11
GC content: 55.5
Gene sequence:
>573_bases ATGAGCAACCCACAGAAAGTCGAGGTTTCCCGAGGGCATAGCCCGGTTCGCGCGTTCCGCGCGCCCGTTGGGGAAACGCG CCCCCAGGCTCAGGACTCTCATCTTCGCACCCCTGATGTGCGGCCAGTCTATCTCGAAGCCTTGACCTTGGTCGAACGTC TGCATCGGCGTTTGCTCGATATTATCAAGGATGAATTCGACCGGCGCGGTCGCAGTGACATCAATTCCGTTCAGGCGCTT TTGCTTTATAATATTGGCGACAAGGAATTGACGGCGGGGGAATTACGGACGCGCGGTTATTATTTGGGCTCGAATGTCTC TTATAACGTCAAGAAACTGGTCGAAGCTGGTTATTTGCACCATGCCCGCTCGCGGATCGATCGTCGTTCGGTCCGCATCA GCCTGACGGAAAAGGGCAGGTCGGTGCATGAAATCGTGGCGGCCCTGTATGACAAACATGTCACCACCGTCGAGCAGATC GGTGGCCTGTCCGTGGACGAATTCAGCAAGCTCAATCATGCCTTGCTGCGTCTTGAACGGTTCTGGACCGATCAGATCCG CTATCGCCTTTAA
Upstream 100 bases:
>100_bases TACCATACTTGTTTGTATAGTGCTTCTCATTGGAGCATTTTGTTTCGTTATTTCAAATCGGTCGACAAAGTGATCGGCGT CTATTGCGATGAGGTCCATT
Downstream 100 bases:
>100_bases AAAACATCGGGCTGTCAGAGGCCGGTCATCTTAACTTTTGTATCTGATGGATTAAATCCTCTCCGAGGAAAGAGTCTTCG GAGGGGATTTTTCGTCTGAT
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MSNPQKVEVSRGHSPVRAFRAPVGETRPQAQDSHLRTPDVRPVYLEALTLVERLHRRLLDIIKDEFDRRGRSDINSVQAL LLYNIGDKELTAGELRTRGYYLGSNVSYNVKKLVEAGYLHHARSRIDRRSVRISLTEKGRSVHEIVAALYDKHVTTVEQI GGLSVDEFSKLNHALLRLERFWTDQIRYRL
Sequences:
>Translated_190_residues MSNPQKVEVSRGHSPVRAFRAPVGETRPQAQDSHLRTPDVRPVYLEALTLVERLHRRLLDIIKDEFDRRGRSDINSVQAL LLYNIGDKELTAGELRTRGYYLGSNVSYNVKKLVEAGYLHHARSRIDRRSVRISLTEKGRSVHEIVAALYDKHVTTVEQI GGLSVDEFSKLNHALLRLERFWTDQIRYRL >Mature_189_residues SNPQKVEVSRGHSPVRAFRAPVGETRPQAQDSHLRTPDVRPVYLEALTLVERLHRRLLDIIKDEFDRRGRSDINSVQALL LYNIGDKELTAGELRTRGYYLGSNVSYNVKKLVEAGYLHHARSRIDRRSVRISLTEKGRSVHEIVAALYDKHVTTVEQIG GLSVDEFSKLNHALLRLERFWTDQIRYRL
Specific function: Transcriptional activator of genes for galactoglucan synthesis (exopolysaccharide II or EPS II) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH marR-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000835 - InterPro: IPR023187 - InterPro: IPR011991 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21926; Mature: 21795
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPQKVEVSRGHSPVRAFRAPVGETRPQAQDSHLRTPDVRPVYLEALTLVERLHRRLLD CCCCCEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH IIKDEFDRRGRSDINSVQALLLYNIGDKELTAGELRTRGYYLGSNVSYNVKKLVEAGYLH HHHHHHHHCCCCHHHHHHHHHHEECCCCCCCHHHHHHCCEEECCCCCHHHHHHHHHHHHH HARSRIDRRSVRISLTEKGRSVHEIVAALYDKHVTTVEQIGGLSVDEFSKLNHALLRLER HHHHHHHHHHEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH FWTDQIRYRL HHHHHHHCCC >Mature Secondary Structure SNPQKVEVSRGHSPVRAFRAPVGETRPQAQDSHLRTPDVRPVYLEALTLVERLHRRLLD CCCCEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH IIKDEFDRRGRSDINSVQALLLYNIGDKELTAGELRTRGYYLGSNVSYNVKKLVEAGYLH HHHHHHHHCCCCHHHHHHHHHHEECCCCCCCHHHHHHCCEEECCCCCHHHHHHHHHHHHH HARSRIDRRSVRISLTEKGRSVHEIVAALYDKHVTTVEQIGGLSVDEFSKLNHALLRLER HHHHHHHHHHEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH FWTDQIRYRL HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8672816; 9023225; 9501442; 11481431 [H]