| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is fatA [H]
Identifier: 182677852
GI number: 182677852
Start: 979472
End: 981622
Strand: Direct
Name: fatA [H]
Synonym: Bind_0859
Alternate gene names: 182677852
Gene position: 979472-981622 (Clockwise)
Preceding gene: 182677851
Following gene: 182677853
Centisome position: 23.49
GC content: 53.6
Gene sequence:
>2151_bases GTGTATCGTCCTTTTTGTGTCGTCGATCTCCGCATGTTCGTTTGCCTCGGATTGATCGATATGTCTGTCTCTGTCTCGGC GGCCCGCGCTGAAGATACACAGATCCAGCTTGCGCCCGTGACTATCTCAGCCGAAGCGTCTGCTCCTTCTCTTTCCTCTG TCGAAGGCGGCTATCGCGTCAAGACGGCGTCCCTCGGCCCCTTCGGCGAGGTGCCCGTCGTGAATACGCCCTTTTCGATC ACGATTGTTCCCTCTGATCTCGCCAAAAACCAGCAATTGCTGAGTGTGCGCGAGGCCTTTCGTCTGATCCCTTCGGTTCA GGGCGAAAATATCCGGCCTCAGACACGAGGCATGCAGGCCGGTGTTGTGCAGAATACACGGATCGACGGGCTGAACATTG CGGCAACGACCGATTATCCGATTGAGCAATTCGACCGGATCGAAGTGTTGAACGGCTTATCGAGTGCCATTTATGGTCCG TCCAATCCCGCTGGCACCTTCAATTTCGTGCTCAAACGTCCGACCGATGTGCCCTTGCATGAATTGACCTTCGGCTATCT TTCGCAAACATCCTGGCTCGGTCATGCTGATGTCGGTGGCTATCTCGATGAGGGAAAGCATTTCGCCTATCGGTTGAATC TCTTGAATCAGAACGGCGAAAATTATGTCAACGGCAGTCAGTTGAAACGACAGCTCGCGAGCTTGGCCTTCGACGTTCAT ATTACGCCTGAAACGGTCGTGGAGACCAACGCCAGCTTCTACAATTATGTCACCAAGGGACTGCCCGGCACCTTTGCCCT CGCCTCGAAAGTCGCCTTTCCGGCGGCGCCCGATCCGACGCGGCTGGGCTATGGCCAGCCCAATGGGGGGGACGACAATC AGACGCTCATTCTCGGTGGGCGGCTCAAACATGATTTCAGCCAGGATTGGCATTTGACGGCCGGAATCCTGCGCCAGTCC AATGACCGAGCCTCAACGGTTCCGACCAATACGATCACCAATAATAGCGGCGCTTATACAACGACCGCGGCGACTACCAC TTATTCTTTGGATACGGTCTTGAGCAATCAAGTCGCTTTGAACGGCCGTTTTTTCACAGGTCCTGTCTCTCATGATTTCG TCATCGCTAACAACGGCTTTCTATGGGATCGCTATACGCCTTTTCAAACCGGAGCGGTGACGCTCGGCAGCGCGAGTCTG AACAATCCCGCCATTTTTCCGGCGAAGGCCTTTCCCGATTTCAAGAACCGTTATCGCTCTGTCGAAACCCTTCAGCAATC GATCACCGTCGGTGATATCATTGGATTGACGGATCAATGGGCGGTGCAATTCGCCATCAGCCAAAGCTGGATCAATGCGC AGAATTTCAACAAAACTGGCGTGATGACCAGCAATTACAATACGAGCGGTGTCAGTCCGACGGCGAGTCTCTTGTTCAAG CCTTATCAGAACATGACTGCCTATCTCACTTATGCGGAAAATCTGCAACAAGGTGATAGCGCCCCGGCCGGCGTGGCCAA TGCAGGCAATGTGCTCGCGCCCTATCGCGCCAAGCAATGGGAACTGGGCTATAAGGTCGATCTCGATAAAATCAATCTCC GTGCCGCGCTTTTCCAGATTCAGCGTCCCTATGCCTATACCGTGAATAATGTCTTCGGTATCAACGGGTCCCAAATCAAT CGCGGAATTGAACTGACGGCCGCAGGCAAATTGACTGATGATTTGACTGTATTCGGCGGTCTCTCGCTGCTTGATCCACG CCTTTATGATACCGGTTCGGTTACGACAACAGGCAAACAGATTCTTGGTCTGTCGCATGTCATGTTCAATGTTCTCCTGG ATTATCAGGTTCCGGTAGTGCCTGGCCTCGCCTTCAACGCCAATGTCAATTTTGCCAGTGACCGGCCGGGCGATTATGCG AATACGACCTTCGTCAATGGCTATGTCGTCGCTGATCTTGGCATGCGTTACGTCACGAAGATCTTCGAGCGGCCGGTGAC CTGGCGTCTCAATGTTTATAATATCGCCGATGCCCATTATTGGGCGAATGTCGCGCCGAGTGGCCAGAACGGCTACAACA GCACGGACAACGGGACAGGAACGCTGGGTGCGCCGCGCACTGTCAGATTATCCATGCAGATGGATTTTTGA
Upstream 100 bases:
>100_bases TAAATTCTATAAAAAGCCTTTTAAAATGAAAAGTTATGGCTAAGCTCTTGCTGAGCTATATAGGGGGCGATACGCTGTCG CGGTTCTTGAGGGGAAAACC
Downstream 100 bases:
>100_bases ACCATGATGAAGCCAATGATCGCGCGCATTGTGTTCTTGGTTTTGAGCCTTGCGTCCCACGGTCTCGCCCTAGCGCAAGA GGCGAGCCCGGCCAGATCAT
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: OM2 [H]
Number of amino acids: Translated: 716; Mature: 716
Protein sequence:
>716_residues MYRPFCVVDLRMFVCLGLIDMSVSVSAARAEDTQIQLAPVTISAEASAPSLSSVEGGYRVKTASLGPFGEVPVVNTPFSI TIVPSDLAKNQQLLSVREAFRLIPSVQGENIRPQTRGMQAGVVQNTRIDGLNIAATTDYPIEQFDRIEVLNGLSSAIYGP SNPAGTFNFVLKRPTDVPLHELTFGYLSQTSWLGHADVGGYLDEGKHFAYRLNLLNQNGENYVNGSQLKRQLASLAFDVH ITPETVVETNASFYNYVTKGLPGTFALASKVAFPAAPDPTRLGYGQPNGGDDNQTLILGGRLKHDFSQDWHLTAGILRQS NDRASTVPTNTITNNSGAYTTTAATTTYSLDTVLSNQVALNGRFFTGPVSHDFVIANNGFLWDRYTPFQTGAVTLGSASL NNPAIFPAKAFPDFKNRYRSVETLQQSITVGDIIGLTDQWAVQFAISQSWINAQNFNKTGVMTSNYNTSGVSPTASLLFK PYQNMTAYLTYAENLQQGDSAPAGVANAGNVLAPYRAKQWELGYKVDLDKINLRAALFQIQRPYAYTVNNVFGINGSQIN RGIELTAAGKLTDDLTVFGGLSLLDPRLYDTGSVTTTGKQILGLSHVMFNVLLDYQVPVVPGLAFNANVNFASDRPGDYA NTTFVNGYVVADLGMRYVTKIFERPVTWRLNVYNIADAHYWANVAPSGQNGYNSTDNGTGTLGAPRTVRLSMQMDF
Sequences:
>Translated_716_residues MYRPFCVVDLRMFVCLGLIDMSVSVSAARAEDTQIQLAPVTISAEASAPSLSSVEGGYRVKTASLGPFGEVPVVNTPFSI TIVPSDLAKNQQLLSVREAFRLIPSVQGENIRPQTRGMQAGVVQNTRIDGLNIAATTDYPIEQFDRIEVLNGLSSAIYGP SNPAGTFNFVLKRPTDVPLHELTFGYLSQTSWLGHADVGGYLDEGKHFAYRLNLLNQNGENYVNGSQLKRQLASLAFDVH ITPETVVETNASFYNYVTKGLPGTFALASKVAFPAAPDPTRLGYGQPNGGDDNQTLILGGRLKHDFSQDWHLTAGILRQS NDRASTVPTNTITNNSGAYTTTAATTTYSLDTVLSNQVALNGRFFTGPVSHDFVIANNGFLWDRYTPFQTGAVTLGSASL NNPAIFPAKAFPDFKNRYRSVETLQQSITVGDIIGLTDQWAVQFAISQSWINAQNFNKTGVMTSNYNTSGVSPTASLLFK PYQNMTAYLTYAENLQQGDSAPAGVANAGNVLAPYRAKQWELGYKVDLDKINLRAALFQIQRPYAYTVNNVFGINGSQIN RGIELTAAGKLTDDLTVFGGLSLLDPRLYDTGSVTTTGKQILGLSHVMFNVLLDYQVPVVPGLAFNANVNFASDRPGDYA NTTFVNGYVVADLGMRYVTKIFERPVTWRLNVYNIADAHYWANVAPSGQNGYNSTDNGTGTLGAPRTVRLSMQMDF >Mature_716_residues MYRPFCVVDLRMFVCLGLIDMSVSVSAARAEDTQIQLAPVTISAEASAPSLSSVEGGYRVKTASLGPFGEVPVVNTPFSI TIVPSDLAKNQQLLSVREAFRLIPSVQGENIRPQTRGMQAGVVQNTRIDGLNIAATTDYPIEQFDRIEVLNGLSSAIYGP SNPAGTFNFVLKRPTDVPLHELTFGYLSQTSWLGHADVGGYLDEGKHFAYRLNLLNQNGENYVNGSQLKRQLASLAFDVH ITPETVVETNASFYNYVTKGLPGTFALASKVAFPAAPDPTRLGYGQPNGGDDNQTLILGGRLKHDFSQDWHLTAGILRQS NDRASTVPTNTITNNSGAYTTTAATTTYSLDTVLSNQVALNGRFFTGPVSHDFVIANNGFLWDRYTPFQTGAVTLGSASL NNPAIFPAKAFPDFKNRYRSVETLQQSITVGDIIGLTDQWAVQFAISQSWINAQNFNKTGVMTSNYNTSGVSPTASLLFK PYQNMTAYLTYAENLQQGDSAPAGVANAGNVLAPYRAKQWELGYKVDLDKINLRAALFQIQRPYAYTVNNVFGINGSQIN RGIELTAAGKLTDDLTVFGGLSLLDPRLYDTGSVTTTGKQILGLSHVMFNVLLDYQVPVVPGLAFNANVNFASDRPGDYA NTTFVNGYVVADLGMRYVTKIFERPVTWRLNVYNIADAHYWANVAPSGQNGYNSTDNGTGTLGAPRTVRLSMQMDF
Specific function: Anguibactin receptor, essential component of the iron uptake system of V.anguillarum [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=737, Percent_Identity=23.6092265943012, Blast_Score=94, Evalue=3e-20, Organism=Escherichia coli, GI1787024, Length=794, Percent_Identity=24.6851385390428, Blast_Score=94, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 77868; Mature: 77868
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRPFCVVDLRMFVCLGLIDMSVSVSAARAEDTQIQLAPVTISAEASAPSLSSVEGGYRV CCCCEEHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEEEEEEECCCCCCCCHHCCCCEEE KTASLGPFGEVPVVNTPFSITIVPSDLAKNQQLLSVREAFRLIPSVQGENIRPQTRGMQA EEECCCCCCCCCEECCCEEEEEECHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHCCCCC GVVQNTRIDGLNIAATTDYPIEQFDRIEVLNGLSSAIYGPSNPAGTFNFVLKRPTDVPLH CCEECCEECCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHH ELTFGYLSQTSWLGHADVGGYLDEGKHFAYRLNLLNQNGENYVNGSQLKRQLASLAFDVH HHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHEEEEE ITPETVVETNASFYNYVTKGLPGTFALASKVAFPAAPDPTRLGYGQPNGGDDNQTLILGG ECCHHHEECCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECC RLKHDFSQDWHLTAGILRQSNDRASTVPTNTITNNSGAYTTTAATTTYSLDTVLSNQVAL CCCCCCCCCCEEEEHHHHCCCCCCCCCCCCCEECCCCCEEEEEEEEEEEHHHHHCCCEEE NGRFFTGPVSHDFVIANNGFLWDRYTPFQTGAVTLGSASLNNPAIFPAKAFPDFKNRYRS CCEEEECCCCCCEEEECCCEEECCCCCCCCCEEEECCCCCCCCEEEECCCCCHHHHHHHH VETLQQSITVGDIIGLTDQWAVQFAISQSWINAQNFNKTGVMTSNYNTSGVSPTASLLFK HHHHHHHCCHHHEECCCCCCEEEEEEHHHHCCCCCCCCCCCEECCCCCCCCCHHHHHHHC PYQNMTAYLTYAENLQQGDSAPAGVANAGNVLAPYRAKQWELGYKVDLDKINLRAALFQI CCCCEEEEEEEHHHHCCCCCCCCCCCCCCCEECCCCCCEECCCEEEEHHHHHHEEEEHHH QRPYAYTVNNVFGINGSQINRGIELTAAGKLTDDLTVFGGLSLLDPRLYDTGSVTTTGKQ CCCEEEEECCEEECCCHHHCCCEEEEECCCCCCCEEEECCHHHCCCCEECCCCEEECCHH ILGLSHVMFNVLLDYQVPVVPGLAFNANVNFASDRPGDYANTTFVNGYVVADLGMRYVTK HHHHHHHHHHHHHHCCCCCCCCEEEECCEEECCCCCCCCCCCEEECCEEEEHHHHHHHHH IFERPVTWRLNVYNIADAHYWANVAPSGQNGYNSTDNGTGTLGAPRTVRLSMQMDF HHCCCCEEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECC >Mature Secondary Structure MYRPFCVVDLRMFVCLGLIDMSVSVSAARAEDTQIQLAPVTISAEASAPSLSSVEGGYRV CCCCEEHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEEEEEEECCCCCCCCHHCCCCEEE KTASLGPFGEVPVVNTPFSITIVPSDLAKNQQLLSVREAFRLIPSVQGENIRPQTRGMQA EEECCCCCCCCCEECCCEEEEEECHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHCCCCC GVVQNTRIDGLNIAATTDYPIEQFDRIEVLNGLSSAIYGPSNPAGTFNFVLKRPTDVPLH CCEECCEECCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHH ELTFGYLSQTSWLGHADVGGYLDEGKHFAYRLNLLNQNGENYVNGSQLKRQLASLAFDVH HHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHEEEEE ITPETVVETNASFYNYVTKGLPGTFALASKVAFPAAPDPTRLGYGQPNGGDDNQTLILGG ECCHHHEECCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECC RLKHDFSQDWHLTAGILRQSNDRASTVPTNTITNNSGAYTTTAATTTYSLDTVLSNQVAL CCCCCCCCCCEEEEHHHHCCCCCCCCCCCCCEECCCCCEEEEEEEEEEEHHHHHCCCEEE NGRFFTGPVSHDFVIANNGFLWDRYTPFQTGAVTLGSASLNNPAIFPAKAFPDFKNRYRS CCEEEECCCCCCEEEECCCEEECCCCCCCCCEEEECCCCCCCCEEEECCCCCHHHHHHHH VETLQQSITVGDIIGLTDQWAVQFAISQSWINAQNFNKTGVMTSNYNTSGVSPTASLLFK HHHHHHHCCHHHEECCCCCCEEEEEEHHHHCCCCCCCCCCCEECCCCCCCCCHHHHHHHC PYQNMTAYLTYAENLQQGDSAPAGVANAGNVLAPYRAKQWELGYKVDLDKINLRAALFQI CCCCEEEEEEEHHHHCCCCCCCCCCCCCCCEECCCCCCEECCCEEEEHHHHHHEEEEHHH QRPYAYTVNNVFGINGSQINRGIELTAAGKLTDDLTVFGGLSLLDPRLYDTGSVTTTGKQ CCCEEEEECCEEECCCHHHCCCEEEEECCCCCCCEEEECCHHHCCCCEECCCCEEECCHH ILGLSHVMFNVLLDYQVPVVPGLAFNANVNFASDRPGDYANTTFVNGYVVADLGMRYVTK HHHHHHHHHHHHHHCCCCCCCCEEEECCEEECCCCCCCCCCCEEECCEEEEHHHHHHHHH IFERPVTWRLNVYNIADAHYWANVAPSGQNGYNSTDNGTGTLGAPRTVRLSMQMDF HHCCCCEEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2830268; 13129954; 2311935 [H]