| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182677694
Identifier: 182677694
GI number: 182677694
Start: 786907
End: 787332
Strand: Direct
Name: 182677694
Synonym: Bind_0701
Alternate gene names: NA
Gene position: 786907-787332 (Clockwise)
Preceding gene: 182677693
Following gene: 182677695
Centisome position: 18.87
GC content: 56.81
Gene sequence:
>426_bases ATGACCAATAACGCTTTCGTCAATTTGTTTTCACATATCAAACCGGGTGATACGGAATTCCGCACCGATGGTTTGCGGGA TTTCTTCCAATATCGTGATCTCGGCGTCGCCGACGCGACGGGCGGCCGTGTGTTGGCGCAAGTTGTGAGAGCCAACAAGG CACCGGAGAAGGGCACGGGCTGGCATATTCACGAGGCGCAGTTCCATATCGTCATCATGCTGAAGGGTTGGGCGCGTTTC ATGTATGGCGACAAGGAAACCCTGGTTTCCGCCGGTGACTGCGTGCATCAGCAGCCGGGCATCGTGCATTACCTTTTCGA TTACTCGCCCGACATGGAATATATCGAGATCATCGGTCCGTCCGATTTCGCGAGCCCCGGTGTCGAAGGCCCCTGCGAAG TGCCGGCACCCACGCCCTGGGCGTAA
Upstream 100 bases:
>100_bases AGAGAAAATTTCGGAGTATCGCCAAGAGCCATTCTTGATGACTCTTGCCATGAGGTGATCCTTCGGGGCTGCCTTATGTC AGTTGAGTGGGGAAACCATC
Downstream 100 bases:
>100_bases TCGATTGAAGGGACTATGCAGCCAGCTGAGGCTGGCTGCATCCGATTTTGCTTCCCGACTGGATGCAATGTCATGGATCT CCCTGTTACGACGCGTTTGA
Product: cupin 2 domain-containing protein
Products: NA
Alternate protein names: Cupin 2 Conserved Barrel Domain Protein; Cupin 2 Barrel
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MTNNAFVNLFSHIKPGDTEFRTDGLRDFFQYRDLGVADATGGRVLAQVVRANKAPEKGTGWHIHEAQFHIVIMLKGWARF MYGDKETLVSAGDCVHQQPGIVHYLFDYSPDMEYIEIIGPSDFASPGVEGPCEVPAPTPWA
Sequences:
>Translated_141_residues MTNNAFVNLFSHIKPGDTEFRTDGLRDFFQYRDLGVADATGGRVLAQVVRANKAPEKGTGWHIHEAQFHIVIMLKGWARF MYGDKETLVSAGDCVHQQPGIVHYLFDYSPDMEYIEIIGPSDFASPGVEGPCEVPAPTPWA >Mature_140_residues TNNAFVNLFSHIKPGDTEFRTDGLRDFFQYRDLGVADATGGRVLAQVVRANKAPEKGTGWHIHEAQFHIVIMLKGWARFM YGDKETLVSAGDCVHQQPGIVHYLFDYSPDMEYIEIIGPSDFASPGVEGPCEVPAPTPWA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15684; Mature: 15553
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNNAFVNLFSHIKPGDTEFRTDGLRDFFQYRDLGVADATGGRVLAQVVRANKAPEKGTG CCCCCEEHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCC WHIHEAQFHIVIMLKGWARFMYGDKETLVSAGDCVHQQPGIVHYLFDYSPDMEYIEIIGP EEEECCCEEEEEEEECHHHHHCCCHHHHEECCCCCCCCCCEEEEEECCCCCCCEEEEECC SDFASPGVEGPCEVPAPTPWA CCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TNNAFVNLFSHIKPGDTEFRTDGLRDFFQYRDLGVADATGGRVLAQVVRANKAPEKGTG CCCCEEHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCC WHIHEAQFHIVIMLKGWARFMYGDKETLVSAGDCVHQQPGIVHYLFDYSPDMEYIEIIGP EEEECCCEEEEEEEECHHHHHCCCHHHHEECCCCCCCCCCEEEEEECCCCCCCEEEEECC SDFASPGVEGPCEVPAPTPWA CCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA