| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is penA [H]
Identifier: 182677679
GI number: 182677679
Start: 765790
End: 767634
Strand: Direct
Name: penA [H]
Synonym: Bind_0686
Alternate gene names: 182677679
Gene position: 765790-767634 (Clockwise)
Preceding gene: 182677678
Following gene: 182677680
Centisome position: 18.36
GC content: 59.73
Gene sequence:
>1845_bases ATGGAGATGGACCCGCGGATGACGCCGATCCCTGACCCGCATGCTCCCGTCATGCCTTCTCCCGTCATGCCCCCGCCGAC CGCCGATGGAGCGGCAAGGCCGGCCGTGGAAAGGCGTGGGTGGAAACAGCGTATCGCGCCCTTCTTCGGGACGAGGCTGA GCAAAAGTTCCGGGCGCGCCAAGCTCATCGCGCTTGGCTTTCTGGGTCTTTACGGCATCATTGGGGGCAAGCTCGTCTAT TTCGGCCTGCATCCAGAGGCCCCGCAAGAGGCCAAGCGGAGCGGTGATCAGGTTGCGGCGGCGCGGCCCGATCTTCTCGA CCGTAATGGCGAAGTGCTCGCCACCGATGTGAAGGTCATGTCGGTCTTCGCCGAGCCGCGCCGCATCATCGACAAGGACG AGGCCGTCGAACTTTTGACGGCGGTCTTGCCCGATATTGACGCGCGCGATCTCCGGCAGCGTCTTGGCTCGCGCAAGGGG TTCATCTGGGTCAAACGTGCGATCACGCCTAAACAGCGTGAGGAAGTGCATCGGCTGGGCCTGCCGGGCGTCGGCTTTCT GGCCGAGAACAAACGCGTCTATCCCAATGGGCCGATCGCCGCGCATGTGCTGGGTTTCGCCAATCTCGATGGCGTCGGCA TTTCCGGCCTGGAGAAATATATCGACGGACAGGGGCTCGCCGATCTACATGGCGCCGGCTTTAGCCTGACGCAGCAGGAT CTGAAGCCGATCGTGACGTCCCTTGATCTCAAGGCGACTTACGCCGTGCGCGACGAATTGGCCAAGGGCATTGCGCATTT CAAGGCGAAGGCTGGGGCTGCCTGTATTCTCGACGTGAATACGGGCGAGGTCATCGCCATGGCCTCACTACCAGATTATG ATCCGAACACGCCGGCCGATGCGCTTGATCCCAATCATATCAACCGGCTGTCCGTCGGTGTTTATGAAATGGGCTCGACT TTCAAGGCGATTTCCATCGCCATGGCGCTCGAGGGCAATAGGGTCAATCTCAATTCCCGGATCGACGCGCGCGATTCCCT GCGCTACGGCCGTTTTACCATTCATGATTTCCACGCCCAGCACCGCATGCTGAGTGTGCCGGAAGTCTTTACTTATTCCT CGAATATTGGCACCGCGCGCATGGCTTTGATGGTCGGCGTCGAGGGGCACAAAGCCTTTTTGCGCAAAATGGGCCAATTG AACCGGCTGACCACTGAATTGCCGGAATCTGCTGAGCCTCTGGTGCCGAGGAATTGGGGTGAACTCAATACGATGACCAT CGCCTTCGGCCAAGGCCTCAATGTCGCCCCCTTGCAAGCGACCATGGCGGTGGGAGCCTTGGTCAATGGCGGGCTGTTGA TCAAGCCGACTTTCTTGAAACGCAGTGAGGAAGAGGCAAAACGCAATGTGCCGCGCGTCGTGCGTCCGGAAACGTCTGAA TCGATGCGCTATCTGATGCGTCTGAATGCGGAAATTGGATCGGCGCGTCTGGTTGATATCAAGGGCTATTTCATCGGCGG CAAGACCGGCACGGCCGACAAGATCGTGCATGGCCATTACGCCAAGGATAAAGTGTTCACGACGTTCATGGCGATCATGC CGGCCGACAAGCCGAAATATCTTTTCCTGACGCTGATGGATGAGCCGCAGGGCCTGCCGGAAACGGGCGGTTATCGGACG GCTGCCTGGAACTCTGGCTCGGTGACGGCACGGATCATCGAACGGACCGGGCCTTTGCTTGGCATTCCGCCGCGTCTCGA ATTGCCGACACAGCCTTTCCCGCTGCTCGCCAAGCTCGGCTATGGCATCGCCAATGTTCCCCAGACGAGTCGGGGAGAGC ATTGA
Upstream 100 bases:
>100_bases GCTCGAAGCTTTGGGACTCGACCAGCCGACGACCACGCCGCGCGAGGGAGGCTCGGGCGATGCCGCGACGCCGACCTCGG CGCAACGATAGGAGCGCTGG
Downstream 100 bases:
>100_bases TGCGGCTTGATGCACTCTTCCCCGATGCATTAATCGAACCGCCGGCTTTTGGTGCGCGTGAGATCGCTGGCCTTGCCTGT GACAGCCGATTGGTTGCCAA
Product: peptidoglycan glycosyltransferase
Products: NA
Alternate protein names: PBP-2 [H]
Number of amino acids: Translated: 614; Mature: 614
Protein sequence:
>614_residues MEMDPRMTPIPDPHAPVMPSPVMPPPTADGAARPAVERRGWKQRIAPFFGTRLSKSSGRAKLIALGFLGLYGIIGGKLVY FGLHPEAPQEAKRSGDQVAAARPDLLDRNGEVLATDVKVMSVFAEPRRIIDKDEAVELLTAVLPDIDARDLRQRLGSRKG FIWVKRAITPKQREEVHRLGLPGVGFLAENKRVYPNGPIAAHVLGFANLDGVGISGLEKYIDGQGLADLHGAGFSLTQQD LKPIVTSLDLKATYAVRDELAKGIAHFKAKAGAACILDVNTGEVIAMASLPDYDPNTPADALDPNHINRLSVGVYEMGST FKAISIAMALEGNRVNLNSRIDARDSLRYGRFTIHDFHAQHRMLSVPEVFTYSSNIGTARMALMVGVEGHKAFLRKMGQL NRLTTELPESAEPLVPRNWGELNTMTIAFGQGLNVAPLQATMAVGALVNGGLLIKPTFLKRSEEEAKRNVPRVVRPETSE SMRYLMRLNAEIGSARLVDIKGYFIGGKTGTADKIVHGHYAKDKVFTTFMAIMPADKPKYLFLTLMDEPQGLPETGGYRT AAWNSGSVTARIIERTGPLLGIPPRLELPTQPFPLLAKLGYGIANVPQTSRGEH
Sequences:
>Translated_614_residues MEMDPRMTPIPDPHAPVMPSPVMPPPTADGAARPAVERRGWKQRIAPFFGTRLSKSSGRAKLIALGFLGLYGIIGGKLVY FGLHPEAPQEAKRSGDQVAAARPDLLDRNGEVLATDVKVMSVFAEPRRIIDKDEAVELLTAVLPDIDARDLRQRLGSRKG FIWVKRAITPKQREEVHRLGLPGVGFLAENKRVYPNGPIAAHVLGFANLDGVGISGLEKYIDGQGLADLHGAGFSLTQQD LKPIVTSLDLKATYAVRDELAKGIAHFKAKAGAACILDVNTGEVIAMASLPDYDPNTPADALDPNHINRLSVGVYEMGST FKAISIAMALEGNRVNLNSRIDARDSLRYGRFTIHDFHAQHRMLSVPEVFTYSSNIGTARMALMVGVEGHKAFLRKMGQL NRLTTELPESAEPLVPRNWGELNTMTIAFGQGLNVAPLQATMAVGALVNGGLLIKPTFLKRSEEEAKRNVPRVVRPETSE SMRYLMRLNAEIGSARLVDIKGYFIGGKTGTADKIVHGHYAKDKVFTTFMAIMPADKPKYLFLTLMDEPQGLPETGGYRT AAWNSGSVTARIIERTGPLLGIPPRLELPTQPFPLLAKLGYGIANVPQTSRGEH >Mature_614_residues MEMDPRMTPIPDPHAPVMPSPVMPPPTADGAARPAVERRGWKQRIAPFFGTRLSKSSGRAKLIALGFLGLYGIIGGKLVY FGLHPEAPQEAKRSGDQVAAARPDLLDRNGEVLATDVKVMSVFAEPRRIIDKDEAVELLTAVLPDIDARDLRQRLGSRKG FIWVKRAITPKQREEVHRLGLPGVGFLAENKRVYPNGPIAAHVLGFANLDGVGISGLEKYIDGQGLADLHGAGFSLTQQD LKPIVTSLDLKATYAVRDELAKGIAHFKAKAGAACILDVNTGEVIAMASLPDYDPNTPADALDPNHINRLSVGVYEMGST FKAISIAMALEGNRVNLNSRIDARDSLRYGRFTIHDFHAQHRMLSVPEVFTYSSNIGTARMALMVGVEGHKAFLRKMGQL NRLTTELPESAEPLVPRNWGELNTMTIAFGQGLNVAPLQATMAVGALVNGGLLIKPTFLKRSEEEAKRNVPRVVRPETSE SMRYLMRLNAEIGSARLVDIKGYFIGGKTGTADKIVHGHYAKDKVFTTFMAIMPADKPKYLFLTLMDEPQGLPETGGYRT AAWNSGSVTARIIERTGPLLGIPPRLELPTQPFPLLAKLGYGIANVPQTSRGEH
Specific function: Synthesis of cross-linked peptidoglycan from the lipid intermediates [H]
COG id: COG0768
COG function: function code M; Cell division protein FtsI/penicillin-binding protein 2
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transpeptidase family [H]
Homologues:
Organism=Escherichia coli, GI1786272, Length=557, Percent_Identity=28.0071813285458, Blast_Score=171, Evalue=9e-44, Organism=Escherichia coli, GI1786854, Length=496, Percent_Identity=24.7983870967742, Blast_Score=88, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR005311 - InterPro: IPR001460 [H]
Pfam domain/function: PF03717 PBP_dimer; PF00905 Transpeptidase [H]
EC number: NA
Molecular weight: Translated: 66875; Mature: 66875
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: PS00146 BETA_LACTAMASE_A
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMDPRMTPIPDPHAPVMPSPVMPPPTADGAARPAVERRGWKQRIAPFFGTRLSKSSGRA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCE KLIALGFLGLYGIIGGKLVYFGLHPEAPQEAKRSGDQVAAARPDLLDRNGEVLATDVKVM EEEEHHHHHHHHHHCCEEEEEECCCCCCHHHHHCCCCEECCCCHHHCCCCCEEEEHHHHH SVFAEPRRIIDKDEAVELLTAVLPDIDARDLRQRLGSRKGFIWVKRAITPKQREEVHRLG HHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCC LPGVGFLAENKRVYPNGPIAAHVLGFANLDGVGISGLEKYIDGQGLADLHGAGFSLTQQD CCCCCEEECCCEECCCCCHHEEEEECCCCCCCCHHHHHHHHCCCCCCHHCCCCCCCCHHH LKPIVTSLDLKATYAVRDELAKGIAHFKAKAGAACILDVNTGEVIAMASLPDYDPNTPAD HHHHHHHCCCEEHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCCCCCCCC ALDPNHINRLSVGVYEMGSTFKAISIAMALEGNRVNLNSRIDARDSLRYGRFTIHDFHAQ CCCCCCCCEEEEEHHHCCCCEEEEEEEEEECCCEEECCCCCCHHHCCCCCCEEEEEHHHH HRMLSVPEVFTYSSNIGTARMALMVGVEGHKAFLRKMGQLNRLTTELPESAEPLVPRNWG HHHCCCCHHEEECCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC ELNTMTIAFGQGLNVAPLQATMAVGALVNGGLLIKPTFLKRSEEEAKRNVPRVVRPETSE CCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEHHHHCCHHHHHHCCCCEECCCCHH SMRYLMRLNAEIGSARLVDIKGYFIGGKTGTADKIVHGHYAKDKVFTTFMAIMPADKPKY HHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCE LFLTLMDEPQGLPETGGYRTAAWNSGSVTARIIERTGPLLGIPPRLELPTQPFPLLAKLG EEEEEECCCCCCCCCCCEEEEEECCCCEEEEEEHHCCCEECCCCCCCCCCCCCHHHHHHC YGIANVPQTSRGEH CCCCCCCCCCCCCC >Mature Secondary Structure MEMDPRMTPIPDPHAPVMPSPVMPPPTADGAARPAVERRGWKQRIAPFFGTRLSKSSGRA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCE KLIALGFLGLYGIIGGKLVYFGLHPEAPQEAKRSGDQVAAARPDLLDRNGEVLATDVKVM EEEEHHHHHHHHHHCCEEEEEECCCCCCHHHHHCCCCEECCCCHHHCCCCCEEEEHHHHH SVFAEPRRIIDKDEAVELLTAVLPDIDARDLRQRLGSRKGFIWVKRAITPKQREEVHRLG HHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCC LPGVGFLAENKRVYPNGPIAAHVLGFANLDGVGISGLEKYIDGQGLADLHGAGFSLTQQD CCCCCEEECCCEECCCCCHHEEEEECCCCCCCCHHHHHHHHCCCCCCHHCCCCCCCCHHH LKPIVTSLDLKATYAVRDELAKGIAHFKAKAGAACILDVNTGEVIAMASLPDYDPNTPAD HHHHHHHCCCEEHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCCCCCCCC ALDPNHINRLSVGVYEMGSTFKAISIAMALEGNRVNLNSRIDARDSLRYGRFTIHDFHAQ CCCCCCCCEEEEEHHHCCCCEEEEEEEEEECCCEEECCCCCCHHHCCCCCCEEEEEHHHH HRMLSVPEVFTYSSNIGTARMALMVGVEGHKAFLRKMGQLNRLTTELPESAEPLVPRNWG HHHCCCCHHEEECCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC ELNTMTIAFGQGLNVAPLQATMAVGALVNGGLLIKPTFLKRSEEEAKRNVPRVVRPETSE CCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEHHHHCCHHHHHHCCCCEECCCCHH SMRYLMRLNAEIGSARLVDIKGYFIGGKTGTADKIVHGHYAKDKVFTTFMAIMPADKPKY HHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCE LFLTLMDEPQGLPETGGYRTAAWNSGSVTARIIERTGPLLGIPPRLELPTQPFPLLAKLG EEEEEECCCCCCCCCCCEEEEEECCCCEEEEEEHHCCCEECCCCCCCCCCCCCHHHHHHC YGIANVPQTSRGEH CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3126399 [H]