| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is eda [H]
Identifier: 182677622
GI number: 182677622
Start: 711247
End: 711903
Strand: Direct
Name: eda [H]
Synonym: Bind_0629
Alternate gene names: 182677622
Gene position: 711247-711903 (Clockwise)
Preceding gene: 182677621
Following gene: 182677623
Centisome position: 17.06
GC content: 63.32
Gene sequence:
>657_bases ATGAGCCATGATCCTCACACAGACTTGCAATCCGGCTTAGCCTCGATCCTGACCTCGGCGCCGGTCGTTCCCGTCGTCAC GATCGAGGATCTGGCCGATGCCGTGCCGCTCGCCAAGGCGCTCGTCGCCGGCGGTCTTCCGGCCATTGAAGTGACCTTGC GCACCAAGGTTGCGATGGAGGCCATTCGTGTCATCGCCGCCGAGGTCGAGGGCGCGATCCCCGGCGTCGGCACGATTTTG GAGGCAAGCCAACTCGAGGCGGCGCAAAAGGCGGGGGCGCGTTTCGCCGTTTCACCCGGGGCGACGGACCGCCTGCTTGA TGCCTCAGCCGCACTCAGCCTGCCGCTGCTGCCGGGCATTGCAACAGCCTCCGAAGCCATGGCCTTGATTGAGCGCGGCT TCACTTATGCCAAATTCTTCCCGGCGGAGCCCGCGGGCGGCATCCCCTATCTTTCGGCTCTGGCCACGCCTTTACCGCAA CTGACTTTCTGCCCTACGGGTGGCGTGTCAATCGATAGCGCACCGCGCTATCTGGCGCTGCCCAATGTCATCTGCGTCGG CGGTTCCTGGATGCTCAAACGCGATCATATCAAGGCCAAGGATTGGACCGCTATCGAGAAAGCGAGCGCGGCAGCTGCCG CCATACTCATACGTTGA
Upstream 100 bases:
>100_bases GGCCTGCCTGCCTTCAAGCCGAGCGTTAATACATATGAAACGCGTATTCGTGTTCAGCGCGCGTTCTAAAATTTGTGATA GTCCGGTTCGGAGTTCCGGC
Downstream 100 bases:
>100_bases CCTTATACAAACAATATTTTCACCTAGGGAGGCGGCCCGCTGGGCCGATTGAGATCATGCGCCGGTATCGCCGAGCCAAG ATTGTGGCAACACTGGGTCC
Product: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase
Products: NA
Alternate protein names: 4-hydroxy-2-oxoglutarate aldolase; 2-keto-4-hydroxyglutarate aldolase; KHG-aldolase; 2-dehydro-3-deoxy-phosphogluconate aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG-aldolase; Phospho-2-dehydro-3-deoxygluconate aldolase; Phospho-2-keto-3-deoxygluconate aldolase [H]
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MSHDPHTDLQSGLASILTSAPVVPVVTIEDLADAVPLAKALVAGGLPAIEVTLRTKVAMEAIRVIAAEVEGAIPGVGTIL EASQLEAAQKAGARFAVSPGATDRLLDASAALSLPLLPGIATASEAMALIERGFTYAKFFPAEPAGGIPYLSALATPLPQ LTFCPTGGVSIDSAPRYLALPNVICVGGSWMLKRDHIKAKDWTAIEKASAAAAAILIR
Sequences:
>Translated_218_residues MSHDPHTDLQSGLASILTSAPVVPVVTIEDLADAVPLAKALVAGGLPAIEVTLRTKVAMEAIRVIAAEVEGAIPGVGTIL EASQLEAAQKAGARFAVSPGATDRLLDASAALSLPLLPGIATASEAMALIERGFTYAKFFPAEPAGGIPYLSALATPLPQ LTFCPTGGVSIDSAPRYLALPNVICVGGSWMLKRDHIKAKDWTAIEKASAAAAAILIR >Mature_217_residues SHDPHTDLQSGLASILTSAPVVPVVTIEDLADAVPLAKALVAGGLPAIEVTLRTKVAMEAIRVIAAEVEGAIPGVGTILE ASQLEAAQKAGARFAVSPGATDRLLDASAALSLPLLPGIATASEAMALIERGFTYAKFFPAEPAGGIPYLSALATPLPQL TFCPTGGVSIDSAPRYLALPNVICVGGSWMLKRDHIKAKDWTAIEKASAAAAAILIR
Specific function: KEY ENZYME IN THE ENTNER-DOUDOROFF PATHWAY. PARTICIPATES IN THE REGULATION OF THE INTRACELLULAR LEVEL OF GLYOXYLATE. [C]
COG id: COG0800
COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the KHG/KDPG aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1788156, Length=200, Percent_Identity=50, Blast_Score=177, Evalue=5e-46,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000887 - InterPro: IPR013785 [H]
Pfam domain/function: PF01081 Aldolase [H]
EC number: =4.1.3.16; =4.1.2.14 [H]
Molecular weight: Translated: 22325; Mature: 22194
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: PS00159 ALDOLASE_KDPG_KHG_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHDPHTDLQSGLASILTSAPVVPVVTIEDLADAVPLAKALVAGGLPAIEVTLRTKVAME CCCCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHH AIRVIAAEVEGAIPGVGTILEASQLEAAQKAGARFAVSPGATDRLLDASAALSLPLLPGI HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCCCCH ATASEAMALIERGFTYAKFFPAEPAGGIPYLSALATPLPQLTFCPTGGVSIDSAPRYLAL HHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEC PNVICVGGSWMLKRDHIKAKDWTAIEKASAAAAAILIR CCEEEECCCEEEECCCCCCCCCHHHHHHHHHHEEEEEC >Mature Secondary Structure SHDPHTDLQSGLASILTSAPVVPVVTIEDLADAVPLAKALVAGGLPAIEVTLRTKVAME CCCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHH AIRVIAAEVEGAIPGVGTILEASQLEAAQKAGARFAVSPGATDRLLDASAALSLPLLPGI HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCCCCH ATASEAMALIERGFTYAKFFPAEPAGGIPYLSALATPLPQLTFCPTGGVSIDSAPRYLAL HHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEC PNVICVGGSWMLKRDHIKAKDWTAIEKASAAAAAILIR CCEEEECCCEEEECCCCCCCCCHHHHHHHHHHEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8145647 [H]