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The map label for this gene is ydfJ [H]

Identifier: 182677620

GI number: 182677620

Start: 707950

End: 709386

Strand: Direct

Name: ydfJ [H]

Synonym: Bind_0627

Alternate gene names: 182677620

Gene position: 707950-709386 (Clockwise)

Preceding gene: 182677619

Following gene: 182677621

Centisome position: 16.98

GC content: 53.93

Gene sequence:

>1437_bases
ATGACATCGTCATCCTTAACCTACACAATAAAAAAGGGTACCGGTATGGAAGATGCGTCAATTACACAAAGCCATGCCGC
TACTATACAAAAATCAATTGTTAAACCTGATGCTCGCGATCTGCGGAGAGCAGCTTGGGTGTGCTCTCTTGGCAGTGCGC
TCGAATATTATGATTTCGCACTTTATAGCTTAGCGTCGGCGTTGATCTTTGGTCCGCTGTTTTTTCCTAACCAAGCCGCT
GGCATGGCGTTGATTGCAAGCTTCGGCACTTATTTCCTGGGCTTCGCGGTACGTCCACTCGGCGGTATCCTTTTTGGTTC
ACTCGGTGATCGATTGGGCCGTAAATTCGTCTTGCTGACGACGGTAGCCTTGATGGGTGTGGCAAGCACCGCCATCGGTT
TGATCCCGACGTTCAGTCAGATCGGGTATTGGGCGCCTGGTTTGCTTGTTTTCCTGCGCTTGCTGCAAGGGCTGGGCGCG
GGGGCTGAACAGGCTGGTGCCGCCGTGCTGATGACAGAATATGCGCCGTCGAGTCAGCGAGGTTTCTACGCCTCGCTTCC
TTTCCTCGGTATTCAAATCGGCACCATTCTCGCGGCGGTCGTCTATTTCGTTCTGCTGATGGGGGTTTCCGATATCACAC
AGACAGGCTTGTGGCGTGTTCCTTTTCTCGCCAGCGCAATTATTCTCGGCGTTGCCATTTACATGCGGGTGAGCCTGAAG
GAGTCACCCTCTTTCACCAAGCTGGAGAAGGCGCATAAGACAACAGAAGCACCGCTCCGCAACTTGCTCAAAACCTCGCG
CCGCACCGTTCTCCTTGGAATTGGATTACGGCTCGCGGAAAATGGAGCGTCCTCGATCTATCAGGCTCTGGCTGTCAGTT
ATATCGTTACCGTCACCGGTCTACAAAGCTCCATCGGTGCCTTGTCTCTCGTTGTTGCCGCCATGCTTGGGGCGCTTATC
GTGCCGCTCGCGGGGTATTTGAGCGATCTCTATGGACGAGTCGCGGTCTATCGTGGCTTTGCTGTCCTGCAGGTCTTGAT
CGCTTTTCCCTGCTGGTGGGTATTCAGTCTTGGACATGTTGTGCCCACAATCATTGCTTTCACCATCGCACTCGGCTGCG
CGACATGGGGAATGTTTGGTGCGCAAGCGGCTTTTCTGCCGGAACTGTTTGGTGCGCAACACCGATATATTGGCGTCTCG
GTGACGCGTGAAGTGTCCTCTGTGCTAGCCGGTGGTCTGGCACCGCTAATTGGCTCGGCGATCATCAACCTCGTCGTGCA
AAATAACGCGGGGGCTTCACAGCCGGGTCTTCTCGCATGGATTCCTCTCGCTGGCTATGTCGTCCTCTTGAGCATAGGCA
CAATTGTAGCAACCTTCTTCCTCCCGGAGCCTCGCGGTCGTGATCTTGATGATATCAGGGATGCGATAAACCAATAA

Upstream 100 bases:

>100_bases
AGCCCGCCGCTACTGGTGAAGATGGATTGCGGTCTTTGGCCGTAGCATTAGCAATAAAAGAAGCGGCGCAGACCGGCTGT
CAAAGGGAGGTTCAATACGC

Downstream 100 bases:

>100_bases
GTATTCCCCGAGGATTGCGCTGCAACTATTCAGTCCAACATGCAGGCTGTGCTCGAAACACGTCCATAGGACTTGAGCAC
GGCTGATTTGAAAGCTTCTG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 477

Protein sequence:

>478_residues
MTSSSLTYTIKKGTGMEDASITQSHAATIQKSIVKPDARDLRRAAWVCSLGSALEYYDFALYSLASALIFGPLFFPNQAA
GMALIASFGTYFLGFAVRPLGGILFGSLGDRLGRKFVLLTTVALMGVASTAIGLIPTFSQIGYWAPGLLVFLRLLQGLGA
GAEQAGAAVLMTEYAPSSQRGFYASLPFLGIQIGTILAAVVYFVLLMGVSDITQTGLWRVPFLASAIILGVAIYMRVSLK
ESPSFTKLEKAHKTTEAPLRNLLKTSRRTVLLGIGLRLAENGASSIYQALAVSYIVTVTGLQSSIGALSLVVAAMLGALI
VPLAGYLSDLYGRVAVYRGFAVLQVLIAFPCWWVFSLGHVVPTIIAFTIALGCATWGMFGAQAAFLPELFGAQHRYIGVS
VTREVSSVLAGGLAPLIGSAIINLVVQNNAGASQPGLLAWIPLAGYVVLLSIGTIVATFFLPEPRGRDLDDIRDAINQ

Sequences:

>Translated_478_residues
MTSSSLTYTIKKGTGMEDASITQSHAATIQKSIVKPDARDLRRAAWVCSLGSALEYYDFALYSLASALIFGPLFFPNQAA
GMALIASFGTYFLGFAVRPLGGILFGSLGDRLGRKFVLLTTVALMGVASTAIGLIPTFSQIGYWAPGLLVFLRLLQGLGA
GAEQAGAAVLMTEYAPSSQRGFYASLPFLGIQIGTILAAVVYFVLLMGVSDITQTGLWRVPFLASAIILGVAIYMRVSLK
ESPSFTKLEKAHKTTEAPLRNLLKTSRRTVLLGIGLRLAENGASSIYQALAVSYIVTVTGLQSSIGALSLVVAAMLGALI
VPLAGYLSDLYGRVAVYRGFAVLQVLIAFPCWWVFSLGHVVPTIIAFTIALGCATWGMFGAQAAFLPELFGAQHRYIGVS
VTREVSSVLAGGLAPLIGSAIINLVVQNNAGASQPGLLAWIPLAGYVVLLSIGTIVATFFLPEPRGRDLDDIRDAINQ
>Mature_477_residues
TSSSLTYTIKKGTGMEDASITQSHAATIQKSIVKPDARDLRRAAWVCSLGSALEYYDFALYSLASALIFGPLFFPNQAAG
MALIASFGTYFLGFAVRPLGGILFGSLGDRLGRKFVLLTTVALMGVASTAIGLIPTFSQIGYWAPGLLVFLRLLQGLGAG
AEQAGAAVLMTEYAPSSQRGFYASLPFLGIQIGTILAAVVYFVLLMGVSDITQTGLWRVPFLASAIILGVAIYMRVSLKE
SPSFTKLEKAHKTTEAPLRNLLKTSRRTVLLGIGLRLAENGASSIYQALAVSYIVTVTGLQSSIGALSLVVAAMLGALIV
PLAGYLSDLYGRVAVYRGFAVLQVLIAFPCWWVFSLGHVVPTIIAFTIALGCATWGMFGAQAAFLPELFGAQHRYIGVSV
TREVSSVLAGGLAPLIGSAIINLVVQNNAGASQPGLLAWIPLAGYVVLLSIGTIVATFFLPEPRGRDLDDIRDAINQ

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]

Homologues:

Organism=Escherichia coli, GI1788292, Length=403, Percent_Identity=35.2357320099256, Blast_Score=215, Evalue=5e-57,
Organism=Escherichia coli, GI1790550, Length=419, Percent_Identity=30.3102625298329, Blast_Score=182, Evalue=3e-47,
Organism=Escherichia coli, GI1789941, Length=415, Percent_Identity=35.421686746988, Blast_Score=180, Evalue=2e-46,
Organism=Escherichia coli, GI1788942, Length=401, Percent_Identity=31.1720698254364, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI87082231, Length=300, Percent_Identity=24.6666666666667, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004736
- InterPro:   IPR020846
- InterPro:   IPR016196
- InterPro:   IPR005828 [H]

Pfam domain/function: PF00083 Sugar_tr [H]

EC number: NA

Molecular weight: Translated: 50588; Mature: 50457

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSSLTYTIKKGTGMEDASITQSHAATIQKSIVKPDARDLRRAAWVCSLGSALEYYDFA
CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LYSLASALIFGPLFFPNQAAGMALIASFGTYFLGFAVRPLGGILFGSLGDRLGRKFVLLT
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
TVALMGVASTAIGLIPTFSQIGYWAPGLLVFLRLLQGLGAGAEQAGAAVLMTEYAPSSQR
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHCCCEEEEEECCCCCCC
GFYASLPFLGIQIGTILAAVVYFVLLMGVSDITQTGLWRVPFLASAIILGVAIYMRVSLK
CEEEECCHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
ESPSFTKLEKAHKTTEAPLRNLLKTSRRTVLLGIGLRLAENGASSIYQALAVSYIVTVTG
CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHCCHHHHHHHHHHHHHHHHHH
LQSSIGALSLVVAAMLGALIVPLAGYLSDLYGRVAVYRGFAVLQVLIAFPCWWVFSLGHV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPTIIAFTIALGCATWGMFGAQAAFLPELFGAQHRYIGVSVTREVSSVLAGGLAPLIGSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
IINLVVQNNAGASQPGLLAWIPLAGYVVLLSIGTIVATFFLPEPRGRDLDDIRDAINQ
HHHHHEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
TSSSLTYTIKKGTGMEDASITQSHAATIQKSIVKPDARDLRRAAWVCSLGSALEYYDFA
CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LYSLASALIFGPLFFPNQAAGMALIASFGTYFLGFAVRPLGGILFGSLGDRLGRKFVLLT
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
TVALMGVASTAIGLIPTFSQIGYWAPGLLVFLRLLQGLGAGAEQAGAAVLMTEYAPSSQR
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHCCCEEEEEECCCCCCC
GFYASLPFLGIQIGTILAAVVYFVLLMGVSDITQTGLWRVPFLASAIILGVAIYMRVSLK
CEEEECCHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
ESPSFTKLEKAHKTTEAPLRNLLKTSRRTVLLGIGLRLAENGASSIYQALAVSYIVTVTG
CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHCCHHHHHHHHHHHHHHHHHH
LQSSIGALSLVVAAMLGALIVPLAGYLSDLYGRVAVYRGFAVLQVLIAFPCWWVFSLGHV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPTIIAFTIALGCATWGMFGAQAAFLPELFGAQHRYIGVSVTREVSSVLAGGLAPLIGSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
IINLVVQNNAGASQPGLLAWIPLAGYVVLLSIGTIVATFFLPEPRGRDLDDIRDAINQ
HHHHHEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]