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The map label for this gene is 17548096

Identifier: 17548096

GI number: 17548096

Start: 3640728

End: 3641537

Strand: Direct

Name: 17548096

Synonym: RSc3379

Alternate gene names: NA

Gene position: 3640728-3641537 (Clockwise)

Preceding gene: 17548095

Following gene: 17548097

Centisome position: 97.96

GC content: 64.94

Gene sequence:

>810_bases
ATGCAAGCCAAGCTGTTTCCATCGCGCGCCACCGTCATCGGTGGCGTTGTCTTCTGCGCCGCCGTTCTGAACGGGACGCT
CGCCCATGCGCAATCCACCGATACCGCCCCGGCGGCTGCGCCCGCTCCCGCGCTGACGGCTAACGTCACGCTGGCCAGCC
AGTACCGCTATCGCGGGATCATGCAGTCCAACAACAAGCCGGCGATCCAGGGCGGCTTCGACTACGCGATCCCTGCCGGC
CTGCTGCCCGAGGGCTTCTATGTGGGCAACTGGAACGCGTCGATCAGCTGGCTGAGCGACGCCAACTCGAGCGTTTCGGC
GCCGATCGAGATGGATTTCTACGGCGGCTACAAGACCGAGATCGCCAAGAATGTGCCGATCGACGTGGGCGTGCTGCAGT
ACTACTACCCGGGCAGCTACCCCGAGGGCTTCACGCGCCCGCACACCACCGAAGGCTACGCGCAGATCGGCTACGGCCCC
GTTACCTTCAAGTACTCGCACGCGTTCTCGAACCTGTTCGGCTTTGCCGATTCGCACCACAGCCAGTACTTCGACCTGTC
GGGCAACTTCGACACCGGCTTCTGGGGCCTGACGCTGAACCTGCACGTCGGCTACCAGGACGTGAAGCACCAGAGCCCGC
GCGCTTCGTACGCCGACTGGAAGATCGGCGTGACGAAGGACTTCGGCAGCGGCTGGACGGCATCGCTCGCGTACATCGAC
ACCAACGCCTCGCGCCTGGCCTACACCAACCCGCGCGGCAACTACATGGGCCGCGCGACCGCGCTGCTGGCCGTGACCAA
GACGTTCTGA

Upstream 100 bases:

>100_bases
CAGGCCCTGTGACGGGCGCCAGCGTGCATGCCGCGTCCGGCCCCAGCCAGGCGCCTGTGCGCCGGGCCGCGCGGCACCCA
AAACAACAAGGGAAAGGTCC

Downstream 100 bases:

>100_bases
CCATCGCCTGAACAAAAAGGGGGCGCATATGGACCTCATCTATCTCGGCGGCCTTGCGGCGCTGGCCCTGGCCGTGGGCG
GGCTGCTCGCCTTGTCGGCC

Product: transmembrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MQAKLFPSRATVIGGVVFCAAVLNGTLAHAQSTDTAPAAAPAPALTANVTLASQYRYRGIMQSNNKPAIQGGFDYAIPAG
LLPEGFYVGNWNASISWLSDANSSVSAPIEMDFYGGYKTEIAKNVPIDVGVLQYYYPGSYPEGFTRPHTTEGYAQIGYGP
VTFKYSHAFSNLFGFADSHHSQYFDLSGNFDTGFWGLTLNLHVGYQDVKHQSPRASYADWKIGVTKDFGSGWTASLAYID
TNASRLAYTNPRGNYMGRATALLAVTKTF

Sequences:

>Translated_269_residues
MQAKLFPSRATVIGGVVFCAAVLNGTLAHAQSTDTAPAAAPAPALTANVTLASQYRYRGIMQSNNKPAIQGGFDYAIPAG
LLPEGFYVGNWNASISWLSDANSSVSAPIEMDFYGGYKTEIAKNVPIDVGVLQYYYPGSYPEGFTRPHTTEGYAQIGYGP
VTFKYSHAFSNLFGFADSHHSQYFDLSGNFDTGFWGLTLNLHVGYQDVKHQSPRASYADWKIGVTKDFGSGWTASLAYID
TNASRLAYTNPRGNYMGRATALLAVTKTF
>Mature_269_residues
MQAKLFPSRATVIGGVVFCAAVLNGTLAHAQSTDTAPAAAPAPALTANVTLASQYRYRGIMQSNNKPAIQGGFDYAIPAG
LLPEGFYVGNWNASISWLSDANSSVSAPIEMDFYGGYKTEIAKNVPIDVGVLQYYYPGSYPEGFTRPHTTEGYAQIGYGP
VTFKYSHAFSNLFGFADSHHSQYFDLSGNFDTGFWGLTLNLHVGYQDVKHQSPRASYADWKIGVTKDFGSGWTASLAYID
TNASRLAYTNPRGNYMGRATALLAVTKTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29116; Mature: 29116

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAKLFPSRATVIGGVVFCAAVLNGTLAHAQSTDTAPAAAPAPALTANVTLASQYRYRGI
CCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCEEEEEEEECCHHCCCE
MQSNNKPAIQGGFDYAIPAGLLPEGFYVGNWNASISWLSDANSSVSAPIEMDFYGGYKTE
EECCCCCCEECCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCEEEEECCCCHHH
IAKNVPIDVGVLQYYYPGSYPEGFTRPHTTEGYAQIGYGPVTFKYSHAFSNLFGFADSHH
HHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEECCCEEEEEEHHHHHHHHCCCCCCC
SQYFDLSGNFDTGFWGLTLNLHVGYQDVKHQSPRASYADWKIGVTKDFGSGWTASLAYID
CEEEECCCCCCCCEEEEEEEEEECHHHHHCCCCCCCCCCEEEEEEEECCCCCEEEEEEEE
TNASRLAYTNPRGNYMGRATALLAVTKTF
CCCCEEEEECCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MQAKLFPSRATVIGGVVFCAAVLNGTLAHAQSTDTAPAAAPAPALTANVTLASQYRYRGI
CCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCEEEEEEEECCHHCCCE
MQSNNKPAIQGGFDYAIPAGLLPEGFYVGNWNASISWLSDANSSVSAPIEMDFYGGYKTE
EECCCCCCEECCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCEEEEECCCCHHH
IAKNVPIDVGVLQYYYPGSYPEGFTRPHTTEGYAQIGYGPVTFKYSHAFSNLFGFADSHH
HHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEECCCEEEEEEHHHHHHHHCCCCCCC
SQYFDLSGNFDTGFWGLTLNLHVGYQDVKHQSPRASYADWKIGVTKDFGSGWTASLAYID
CEEEECCCCCCCCEEEEEEEEEECHHHHHCCCCCCCCCCEEEEEEEECCCCCEEEEEEEE
TNASRLAYTNPRGNYMGRATALLAVTKTF
CCCCEEEEECCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA