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The map label for this gene is 17548095

Identifier: 17548095

GI number: 17548095

Start: 3638481

End: 3640208

Strand: Direct

Name: 17548095

Synonym: RSc3378

Alternate gene names: NA

Gene position: 3638481-3640208 (Clockwise)

Preceding gene: 17548094

Following gene: 17548096

Centisome position: 97.9

GC content: 60.65

Gene sequence:

>1728_bases
ATGGCCGTTGAACTCAAGTGCTATGCAAACTGCGACGACGTCTTCATGGTCTGGTGTTCAAAGACGGACGGCAAAATCAG
CGCGATTGACGGCTGTCTGGGTTTTCAAATTGAAGTGCGCAACGATAGCGCGGGCGGGGTGGTCGAAATCCTGCCCAATC
TGAAGGGCTTCCAGGCCGATGTGCCCAAGACGGGAGAAACGCGTCCGTCGAGCGCGTGGCCGTTTCAGACGTTTTCCTGG
ACACATCACGCCATTCTTCACGGCTCGGTGGGGAATCAACTGAGCTACCGAGTCACCCCCATGATCGGCCAACCCGATCA
GTTGAAGGAGGACGAAGCGAACGCCAGCCCTTGGGTTTCCGTCGTGCTCGGTGCATCGGCCGGACCCGAGGCCAATGCGT
TCTTCAACCGAGGCGTCATCCTCTCGCAGTTCGTCAGCCGCTATGCCAAGCAGCACGGGCTCGACACGACGCAGGCGCTC
AAGCGCGACCTCACGAACGACGTCACCAGCCCGCTGATGCAATTCCTGAGCGGTGAACTGGGCAAGGCCATCCGCGGCAT
TGTCGACACCGTGAGCAAGAACGCAAAACTGGAGATCTACTGCGCGCTGTTCGAGCTCGACCTCAATGACCTGATCGAGG
GCTTGATCGCATGCGGAGGCCGGGCGCACGTGATTCTCGCCAACGGCTCGGTGAAGACCGCCGGCGACGATGAGAACAGC
AAGGCAGCGACACAACTGGAAGGCAAGGTCGACCTGCACCGGCGCATGACGGCGCCGCATGGCCTTGCGCACAACAAGTT
CGTCGTCGTGTGCGAAGACGGCCAGCCGACCCATGTCTGGACCGGCAGCACGAACTGGACCCTCACAGGGCTGCATACGC
AGATCAACAACGGCATCGCGCTCAACAGCGCTGAACTCGCGCAAGCCTATTTTCAGCACTGGCATGCGCTGATCGAGGCC
GGCGACGCCTTTCCGAAAACGCTCGTCACCGGCGACGACAAGCCCGTGGGGCCGTTCGCTTTCAACGGCGGCAGCAAAGC
GAGCGTGTGGTTCACGCCGGCGCCGCAGTCAAAGGCAAACCACAACGGCGGGGCCGATATCGACACGCTGGTGAACCTGG
TGAGCAAAGCTCAGCACGGCATCCTGTTCATCATGTTCATGCCGGGCCAGGAGCCGCTGGACACCATCCTCAAAGCGCAG
CCCAACGGCCTCTACGTGCGTGGTGTGGTCAGCACGCTGCCCATGGGAACGAAGGACAAGCCCTCACCTACCTTCCAGAT
CCTGACCGGCGAGGATTTCAAGACGTACGCGCTCGACGTTGTTCAGCCGCAGGGTGCCGAGGCAGTGGGCAGCTTCGTTT
CGACATTTACGCGTCAGCAGTTCCTGAACGGCATGGGGTTTGCCATCACCCATTCGAAGGTGATCGTGATCGACCCGTTC
GGAGATCATCCGGTCGTGGTGACCGGATCGCACAATTTGTCCGCCAGCGCGAGCGGCAAGAACGACGAGAACCTGCTGAT
CATTGAAAACTGCCCCGAGCTCGCTAAAGCGTACGCCGTGAACTGCATGAGCGTTTACGGCCATTACCGTTGGCCGGCCT
ATCAGCATGATCGGCCCCATGCTCAAGCGGCGGGTGCAGACGCTGGATATCTGGCGACGACGCCCGGTTGGCAAACCACA
GCGCTGACTGACCAGAAGGTGAACGACTTGAGGTTCTGGGGTGCGTGA

Upstream 100 bases:

>100_bases
TGACGGCAGGGGTTCTCACCCATCCGATCCAGGCATCATTTCAAACCAACGCCTGAGCGGGTGCGCCGGCAGCGCACCTC
TCTTCCACCAAGGAGCGGTC

Downstream 100 bases:

>100_bases
TTGCAGGCGGCGGAGCATTTGCCCCCGCAGACGGCGCAGCGGTGGCCTGAACGCCCGCTTTGACGAGGTAGCGTGCCGCT
TTCTCCCCCGTCTTCTTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: Nuclease; Phospholipase D Domain Protein

Number of amino acids: Translated: 575; Mature: 574

Protein sequence:

>575_residues
MAVELKCYANCDDVFMVWCSKTDGKISAIDGCLGFQIEVRNDSAGGVVEILPNLKGFQADVPKTGETRPSSAWPFQTFSW
THHAILHGSVGNQLSYRVTPMIGQPDQLKEDEANASPWVSVVLGASAGPEANAFFNRGVILSQFVSRYAKQHGLDTTQAL
KRDLTNDVTSPLMQFLSGELGKAIRGIVDTVSKNAKLEIYCALFELDLNDLIEGLIACGGRAHVILANGSVKTAGDDENS
KAATQLEGKVDLHRRMTAPHGLAHNKFVVVCEDGQPTHVWTGSTNWTLTGLHTQINNGIALNSAELAQAYFQHWHALIEA
GDAFPKTLVTGDDKPVGPFAFNGGSKASVWFTPAPQSKANHNGGADIDTLVNLVSKAQHGILFIMFMPGQEPLDTILKAQ
PNGLYVRGVVSTLPMGTKDKPSPTFQILTGEDFKTYALDVVQPQGAEAVGSFVSTFTRQQFLNGMGFAITHSKVIVIDPF
GDHPVVVTGSHNLSASASGKNDENLLIIENCPELAKAYAVNCMSVYGHYRWPAYQHDRPHAQAAGADAGYLATTPGWQTT
ALTDQKVNDLRFWGA

Sequences:

>Translated_575_residues
MAVELKCYANCDDVFMVWCSKTDGKISAIDGCLGFQIEVRNDSAGGVVEILPNLKGFQADVPKTGETRPSSAWPFQTFSW
THHAILHGSVGNQLSYRVTPMIGQPDQLKEDEANASPWVSVVLGASAGPEANAFFNRGVILSQFVSRYAKQHGLDTTQAL
KRDLTNDVTSPLMQFLSGELGKAIRGIVDTVSKNAKLEIYCALFELDLNDLIEGLIACGGRAHVILANGSVKTAGDDENS
KAATQLEGKVDLHRRMTAPHGLAHNKFVVVCEDGQPTHVWTGSTNWTLTGLHTQINNGIALNSAELAQAYFQHWHALIEA
GDAFPKTLVTGDDKPVGPFAFNGGSKASVWFTPAPQSKANHNGGADIDTLVNLVSKAQHGILFIMFMPGQEPLDTILKAQ
PNGLYVRGVVSTLPMGTKDKPSPTFQILTGEDFKTYALDVVQPQGAEAVGSFVSTFTRQQFLNGMGFAITHSKVIVIDPF
GDHPVVVTGSHNLSASASGKNDENLLIIENCPELAKAYAVNCMSVYGHYRWPAYQHDRPHAQAAGADAGYLATTPGWQTT
ALTDQKVNDLRFWGA
>Mature_574_residues
AVELKCYANCDDVFMVWCSKTDGKISAIDGCLGFQIEVRNDSAGGVVEILPNLKGFQADVPKTGETRPSSAWPFQTFSWT
HHAILHGSVGNQLSYRVTPMIGQPDQLKEDEANASPWVSVVLGASAGPEANAFFNRGVILSQFVSRYAKQHGLDTTQALK
RDLTNDVTSPLMQFLSGELGKAIRGIVDTVSKNAKLEIYCALFELDLNDLIEGLIACGGRAHVILANGSVKTAGDDENSK
AATQLEGKVDLHRRMTAPHGLAHNKFVVVCEDGQPTHVWTGSTNWTLTGLHTQINNGIALNSAELAQAYFQHWHALIEAG
DAFPKTLVTGDDKPVGPFAFNGGSKASVWFTPAPQSKANHNGGADIDTLVNLVSKAQHGILFIMFMPGQEPLDTILKAQP
NGLYVRGVVSTLPMGTKDKPSPTFQILTGEDFKTYALDVVQPQGAEAVGSFVSTFTRQQFLNGMGFAITHSKVIVIDPFG
DHPVVVTGSHNLSASASGKNDENLLIIENCPELAKAYAVNCMSVYGHYRWPAYQHDRPHAQAAGADAGYLATTPGWQTTA
LTDQKVNDLRFWGA

Specific function: Unknown

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62019; Mature: 61887

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVELKCYANCDDVFMVWCSKTDGKISAIDGCLGFQIEVRNDSAGGVVEILPNLKGFQAD
CEEEEEEECCCCEEEEEEECCCCCCEEEECCEEEEEEEEECCCCCCEEEECCCCCCCCCC
VPKTGETRPSSAWPFQTFSWTHHAILHGSVGNQLSYRVTPMIGQPDQLKEDEANASPWVS
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEE
VVLGASAGPEANAFFNRGVILSQFVSRYAKQHGLDTTQALKRDLTNDVTSPLMQFLSGEL
EEEECCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GKAIRGIVDTVSKNAKLEIYCALFELDLNDLIEGLIACGGRAHVILANGSVKTAGDDENS
HHHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHHHHHCCCCEEEEEECCEEEECCCCCCC
KAATQLEGKVDLHRRMTAPHGLAHNKFVVVCEDGQPTHVWTGSTNWTLTGLHTQINNGIA
CHHHHCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEECCCCEEEEEEEEECCCCEE
LNSAELAQAYFQHWHALIEAGDAFPKTLVTGDDKPVGPFAFNGGSKASVWFTPAPQSKAN
ECHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEECCCCEEEEEECCCCCCCCC
HNGGADIDTLVNLVSKAQHGILFIMFMPGQEPLDTILKAQPNGLYVRGVVSTLPMGTKDK
CCCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCEEEEEHHHHCCCCCCCC
PSPTFQILTGEDFKTYALDVVQPQGAEAVGSFVSTFTRQQFLNGMGFAITHSKVIVIDPF
CCCCEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEEECC
GDHPVVVTGSHNLSASASGKNDENLLIIENCPELAKAYAVNCMSVYGHYRWPAYQHDRPH
CCCCEEEECCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
AQAAGADAGYLATTPGWQTTALTDQKVNDLRFWGA
HHHCCCCCCEEEECCCCCEEEECCCCCCCEEECCC
>Mature Secondary Structure 
AVELKCYANCDDVFMVWCSKTDGKISAIDGCLGFQIEVRNDSAGGVVEILPNLKGFQAD
EEEEEEECCCCEEEEEEECCCCCCEEEECCEEEEEEEEECCCCCCEEEECCCCCCCCCC
VPKTGETRPSSAWPFQTFSWTHHAILHGSVGNQLSYRVTPMIGQPDQLKEDEANASPWVS
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEE
VVLGASAGPEANAFFNRGVILSQFVSRYAKQHGLDTTQALKRDLTNDVTSPLMQFLSGEL
EEEECCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GKAIRGIVDTVSKNAKLEIYCALFELDLNDLIEGLIACGGRAHVILANGSVKTAGDDENS
HHHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHHHHHCCCCEEEEEECCEEEECCCCCCC
KAATQLEGKVDLHRRMTAPHGLAHNKFVVVCEDGQPTHVWTGSTNWTLTGLHTQINNGIA
CHHHHCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEECCCCEEEEEEEEECCCCEE
LNSAELAQAYFQHWHALIEAGDAFPKTLVTGDDKPVGPFAFNGGSKASVWFTPAPQSKAN
ECHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEECCCCEEEEEECCCCCCCCC
HNGGADIDTLVNLVSKAQHGILFIMFMPGQEPLDTILKAQPNGLYVRGVVSTLPMGTKDK
CCCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCEEEEEHHHHCCCCCCCC
PSPTFQILTGEDFKTYALDVVQPQGAEAVGSFVSTFTRQQFLNGMGFAITHSKVIVIDPF
CCCCEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEEECC
GDHPVVVTGSHNLSASASGKNDENLLIIENCPELAKAYAVNCMSVYGHYRWPAYQHDRPH
CCCCEEEECCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
AQAAGADAGYLATTPGWQTTALTDQKVNDLRFWGA
HHHCCCCCCEEEECCCCCEEEECCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA