Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

Click here to switch to the map view.

The map label for this gene is tauC [C]

Identifier: 17548088

GI number: 17548088

Start: 3630697

End: 3632457

Strand: Direct

Name: tauC [C]

Synonym: RSc3371

Alternate gene names: 17548088

Gene position: 3630697-3632457 (Clockwise)

Preceding gene: 17548085

Following gene: 17548089

Centisome position: 97.69

GC content: 67.46

Gene sequence:

>1761_bases
ATGCAGCAACACGACAACGAAACGACCATCCGGGGACCCTTCGGCGTCAGCTTCGGCAATCTGCTGACCGCGCCGCCCAA
CCGCTTCGATCTGGCGCTGCTGCCGATCATCCTGGCGGCCATCGTGCTGGTGGCCTACGCGGCCCGGCAGATGAACGTGC
CCTACACCCCGGGCGAGCCGCTGAGCGTGAGCCTGGACGTGGCCCAGCTCCCGTACTACCTGCTGCGCACCAGCATCCGC
ATGCTGCTGGCGCTGGGTGCTTCGCTGCTGTTCTCGTTCGCCTTTGCCGCCATCGCCTCCAGGAACCGCACCGCCGAGAA
GGTGATGGTCCCGGCGCTGGATATCCTGCAGTCCATCCCCGTGCTGGGCTTTCTGTCGATCACGGTCACGGGCTTCATTG
CCCTGTTCCCCGGCAGCCTGGTGGGCGTGGAGTGCGCGGCGATCTTCGCGATCTTCACCTCGCAGGCGTGGAACATGGCG
TTCTCGCTGTACCAGTCGTTCCGCACCATTCCGACCGACCTGGAAGAGGCGGCCACGGTGTTCCGCCTGTCCAAGTGGCA
GCGCTTCTGGCGCCTGGAGGTGCCGTTCGCCATGCCGGGCCTGCTGTGGAACATGATGATGTCGATGTCGGGCGGCTGGT
TCTTCGTGGTGGCGTCCGAGGCGATCTCGGTGTCGGGCCATGACATCAAGCTGCCGGGCATCGGCTCGTACATCTCGCTG
GCGATCCAGCAGCAGAACCTGCACGCCATCGGCTGGGCCATCGTCGCCATGCTGATCGGCATCCTGCTGTACGACCAGTT
GCTGTTCCGCCCGCTGATTGCCTGGGCAGACCGCTTCCGCTTCGATGCCATGTCGTCCGAGCGCGAGCCGCAGTCCTGGC
TGCTGGACCTGCTGCGCCGCTCGGAGTGGGTCAAGTCGCTGCTCGAGCGCACCGCCGCGCTGGCCGAGCGCACGCTGGCC
TGGGGCGCCGAGCGCACGCGGCCCAAGGCCTCCTCCGGCGGCAATAGCTTCGTGCGCCTGCCGTGGGCGGGGCGCGTGGC
CGACCTCATCATTCTGTTGGCGGCCCTGGCGGCGGTCTGGCATATCCTGCAGTTCGTACGCTCGGAGGTGGGCTGGGGCG
AGGTCGGCCGCGTGGTCTGGCTGGGCGTGCTGACCATGACGCGCGTGCTGGTGCTGATCGCGCTGGCCGCGCTGATCTGG
GTGCCGATCGGCATCCGCATCGGCCTGAACCCGAACGTGGCGCGCATCGCGCAGCCGGTGGCCCAGTTCCTGGCGGCCTT
CCCGGCCAACCTGATGTTCCCGCTGGTGGTGATGCTGATCGCGCGCTTCTCGCTCAACCCCGAGATCTGGCTGTCGCCGC
TGATGATTTTCGGGACGCAGTGGTACATCCTGTTCAATGTGATTGCCGGCGCGTCGAGCATCCCGGTCGAGCTGCGGCTG
GCCGCGCGCAACTTCGGCCTGCGCGGCTGGCTGAAGTGGAAGCGCTTCCTGGTGCCGGCGGTGTTCCCCAGCCTGCTGAC
CGGCCTGGTGACGGCCGCGGGCGGCTCCTGGAACGCCAGCATCGTCTCCGAATACGTGTCGTGGGGCGACCGCACGCTGG
TTGCCACCGGCCTCGGCAGCTACATCGCCGAGATGACCGCCAAGGGCGACTTCCCGCGCATCGCCCTGGGCATCGGCGTG
ATGAGCCTGTTCGTGGTCGGCTTCAACCGGCTGCTGTGGAACCGGCTGTACGAAGTGGCGCAAGAGCGCACCCGCCTGTA
A

Upstream 100 bases:

>100_bases
AGGCGGCTTGCCGCCGGGTGCCAAGCGGCCGCTTGCGGGCGCCGCCCCGTCCCACCCGAGTCCAGCGCTTTCCGTCCGCG
ATTCCGTCCCGGTTCTCACA

Downstream 100 bases:

>100_bases
GACGAAAGACGACTTTTGTAGAGAACTGACCATGGGCACCAACGGCGAAGCCGTCATCGAACTGCGCGGCGTCTCGAAAA
TCTTCCGCACGGCGGACCGC

Product: transmembrane ABC transporter protein

Products: taurine [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: ABC Transporter Permease; ABC Transporter Membrane Protein; ABC Transporter Nitrate Permease; ABC Transporter; ABC Anion Transporter; ABC-Type Anion Transport System Permease Component; Anion Transporter Permease Protein; Nitrate ABC Transporter Permease; ABC Transporter Inner Membrane Subunit; ABC Transporter Transmembrane Permease Protein; ABC-Type Anion Transport System; ABC-Type Nitrate Transport Permease; ABC Transport System Permease Protein; Transmembrane ABC Transporter Protein; Nitrate Transport System Permease Protein; Nitrate ABC Transporter Permease Protein; Anion ABC Transporter Permease; Taurine ABC Transporter Permease Protein; Sugar ABC Transporter; Sugar ABC Transporter 1 Permease Protein; Sulfonate Transport Permease Protein; Nitrate Transport System Permease

Number of amino acids: Translated: 586; Mature: 586

Protein sequence:

>586_residues
MQQHDNETTIRGPFGVSFGNLLTAPPNRFDLALLPIILAAIVLVAYAARQMNVPYTPGEPLSVSLDVAQLPYYLLRTSIR
MLLALGASLLFSFAFAAIASRNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGSLVGVECAAIFAIFTSQAWNMA
FSLYQSFRTIPTDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNMMMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISL
AIQQQNLHAIGWAIVAMLIGILLYDQLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRRSEWVKSLLERTAALAERTLA
WGAERTRPKASSGGNSFVRLPWAGRVADLIILLAALAAVWHILQFVRSEVGWGEVGRVVWLGVLTMTRVLVLIALAALIW
VPIGIRIGLNPNVARIAQPVAQFLAAFPANLMFPLVVMLIARFSLNPEIWLSPLMIFGTQWYILFNVIAGASSIPVELRL
AARNFGLRGWLKWKRFLVPAVFPSLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTAKGDFPRIALGIGV
MSLFVVGFNRLLWNRLYEVAQERTRL

Sequences:

>Translated_586_residues
MQQHDNETTIRGPFGVSFGNLLTAPPNRFDLALLPIILAAIVLVAYAARQMNVPYTPGEPLSVSLDVAQLPYYLLRTSIR
MLLALGASLLFSFAFAAIASRNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGSLVGVECAAIFAIFTSQAWNMA
FSLYQSFRTIPTDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNMMMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISL
AIQQQNLHAIGWAIVAMLIGILLYDQLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRRSEWVKSLLERTAALAERTLA
WGAERTRPKASSGGNSFVRLPWAGRVADLIILLAALAAVWHILQFVRSEVGWGEVGRVVWLGVLTMTRVLVLIALAALIW
VPIGIRIGLNPNVARIAQPVAQFLAAFPANLMFPLVVMLIARFSLNPEIWLSPLMIFGTQWYILFNVIAGASSIPVELRL
AARNFGLRGWLKWKRFLVPAVFPSLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTAKGDFPRIALGIGV
MSLFVVGFNRLLWNRLYEVAQERTRL
>Mature_586_residues
MQQHDNETTIRGPFGVSFGNLLTAPPNRFDLALLPIILAAIVLVAYAARQMNVPYTPGEPLSVSLDVAQLPYYLLRTSIR
MLLALGASLLFSFAFAAIASRNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGSLVGVECAAIFAIFTSQAWNMA
FSLYQSFRTIPTDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNMMMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISL
AIQQQNLHAIGWAIVAMLIGILLYDQLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRRSEWVKSLLERTAALAERTLA
WGAERTRPKASSGGNSFVRLPWAGRVADLIILLAALAAVWHILQFVRSEVGWGEVGRVVWLGVLTMTRVLVLIALAALIW
VPIGIRIGLNPNVARIAQPVAQFLAAFPANLMFPLVVMLIARFSLNPEIWLSPLMIFGTQWYILFNVIAGASSIPVELRL
AARNFGLRGWLKWKRFLVPAVFPSLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTAKGDFPRIALGIGV
MSLFVVGFNRLLWNRLYEVAQERTRL

Specific function: Part Of A Binding-Protein-Dependent Transport System For Taurine. Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: COG4986

COG function: function code P; ABC-type anion transport system, duplicated permease component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64846; Mature: 64846

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQHDNETTIRGPFGVSFGNLLTAPPNRFDLALLPIILAAIVLVAYAARQMNVPYTPGEP
CCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LSVSLDVAQLPYYLLRTSIRMLLALGASLLFSFAFAAIASRNRTAEKVMVPALDILQSIP
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
VLGFLSITVTGFIALFPGSLVGVECAAIFAIFTSQAWNMAFSLYQSFRTIPTDLEEAATV
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
FRLSKWQRFWRLEVPFAMPGLLWNMMMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISL
HHHHHHHHHHEEECCHHHHHHHHHHHHHCCCCEEEEEECCCEEECCCEEECCCCCHHHHH
AIQQQNLHAIGWAIVAMLIGILLYDQLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRR
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
SEWVKSLLERTAALAERTLAWGAERTRPKASSGGNSFVRLPWAGRVADLIILLAALAAVW
HHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHH
HILQFVRSEVGWGEVGRVVWLGVLTMTRVLVLIALAALIWVPIGIRIGLNPNVARIAQPV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHH
AQFLAAFPANLMFPLVVMLIARFSLNPEIWLSPLMIFGTQWYILFNVIAGASSIPVELRL
HHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEE
AARNFGLRGWLKWKRFLVPAVFPSLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGS
EHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEHHHHHH
YIAEMTAKGDFPRIALGIGVMSLFVVGFNRLLWNRLYEVAQERTRL
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQQHDNETTIRGPFGVSFGNLLTAPPNRFDLALLPIILAAIVLVAYAARQMNVPYTPGEP
CCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LSVSLDVAQLPYYLLRTSIRMLLALGASLLFSFAFAAIASRNRTAEKVMVPALDILQSIP
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
VLGFLSITVTGFIALFPGSLVGVECAAIFAIFTSQAWNMAFSLYQSFRTIPTDLEEAATV
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
FRLSKWQRFWRLEVPFAMPGLLWNMMMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISL
HHHHHHHHHHEEECCHHHHHHHHHHHHHCCCCEEEEEECCCEEECCCEEECCCCCHHHHH
AIQQQNLHAIGWAIVAMLIGILLYDQLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRR
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
SEWVKSLLERTAALAERTLAWGAERTRPKASSGGNSFVRLPWAGRVADLIILLAALAAVW
HHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHH
HILQFVRSEVGWGEVGRVVWLGVLTMTRVLVLIALAALIWVPIGIRIGLNPNVARIAQPV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHH
AQFLAAFPANLMFPLVVMLIARFSLNPEIWLSPLMIFGTQWYILFNVIAGASSIPVELRL
HHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEE
AARNFGLRGWLKWKRFLVPAVFPSLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGS
EHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEHHHHHH
YIAEMTAKGDFPRIALGIGVMSLFVVGFNRLLWNRLYEVAQERTRL
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: taurine [Periplasm]; ATP; H2O [C]

Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA