Click here to switch to the map view.

The map label for this gene is 17548055

Identifier: 17548055

GI number: 17548055

Start: 3599372

End: 3599839

Strand: Reverse

Name: 17548055

Synonym: RSc3338

Alternate gene names: NA

Gene position: 3599839-3599372 (Counterclockwise)

Preceding gene: 17548057

Following gene: 17548054

Centisome position: 96.86

GC content: 76.28

Gene sequence:

>468_bases
ATGGCGCCTTCGCCCGAGCCGACCATGCCGCCATCCACCCGCCTTGCCCATTCGGAAGACCGTGCCCGCCTGCTGTCGGC
GCTGGCCGGTGCCTGCGCTGCCGCGCCGCTCCAGCTGGCGCACGCCGTCGACGCGCTGCTCGGCCATCCGAGCCAGCATC
CGTGCCTGCTGGTCGAGGAGGGGGCGTCGCTTGTGGGCGTGGCGCCGGTCTCGCTGGTGCCGCACCTGGTGCTGGGCGGG
CTGGTGGCATGGCTGCCGGCCGGCGTGCAGGTATTCGGTGGCGGGCCGCGCACGCGCGATGCCGCGCTCGCCGCGGTGGG
CGAGTACGCCCGCGCGCATGGCATACTCCACGTCCTGCTGCCGCCCGCCGCACTGTCCGCCGCCGATGCCGCCGCGCTCG
GCTTCGTGCCGGAGGCCGGCGGGTGCTGGCTGCGCGCCGAGCGCCCGACGCCGAAGTCGCTGGGCTAG

Upstream 100 bases:

>100_bases
GCCATGGCGGGGCTCCTCGGAGACGTGTCCCATTCTGGCCGGCGCCGAGCGGCAAGAGAAATGCATTCGGCGTCGACATC
CATGCGGCCGCTGCATGACA

Downstream 100 bases:

>100_bases
CCGCATCCGCCGACCTGTCCTGTTCCCGTTGGTTTCCTGATGGATTTCGTATTGCTCGCCGTGGCCGGCTTTCTGGCCGG
CCTGATCGATGCTGTGGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MAPSPEPTMPPSTRLAHSEDRARLLSALAGACAAAPLQLAHAVDALLGHPSQHPCLLVEEGASLVGVAPVSLVPHLVLGG
LVAWLPAGVQVFGGGPRTRDAALAAVGEYARAHGILHVLLPPAALSAADAAALGFVPEAGGCWLRAERPTPKSLG

Sequences:

>Translated_155_residues
MAPSPEPTMPPSTRLAHSEDRARLLSALAGACAAAPLQLAHAVDALLGHPSQHPCLLVEEGASLVGVAPVSLVPHLVLGG
LVAWLPAGVQVFGGGPRTRDAALAAVGEYARAHGILHVLLPPAALSAADAAALGFVPEAGGCWLRAERPTPKSLG
>Mature_154_residues
APSPEPTMPPSTRLAHSEDRARLLSALAGACAAAPLQLAHAVDALLGHPSQHPCLLVEEGASLVGVAPVSLVPHLVLGGL
VAWLPAGVQVFGGGPRTRDAALAAVGEYARAHGILHVLLPPAALSAADAAALGFVPEAGGCWLRAERPTPKSLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15579; Mature: 15448

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPSPEPTMPPSTRLAHSEDRARLLSALAGACAAAPLQLAHAVDALLGHPSQHPCLLVEE
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
GASLVGVAPVSLVPHLVLGGLVAWLPAGVQVFGGGPRTRDAALAAVGEYARAHGILHVLL
CCCEEEECHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHCEEEEEE
PPAALSAADAAALGFVPEAGGCWLRAERPTPKSLG
CCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCC
>Mature Secondary Structure 
APSPEPTMPPSTRLAHSEDRARLLSALAGACAAAPLQLAHAVDALLGHPSQHPCLLVEE
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
GASLVGVAPVSLVPHLVLGGLVAWLPAGVQVFGGGPRTRDAALAAVGEYARAHGILHVLL
CCCEEEECHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHCEEEEEE
PPAALSAADAAALGFVPEAGGCWLRAERPTPKSLG
CCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA