| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is hyi [H]
Identifier: 17547999
GI number: 17547999
Start: 3532701
End: 3533483
Strand: Direct
Name: hyi [H]
Synonym: RSc3282
Alternate gene names: 17547999
Gene position: 3532701-3533483 (Clockwise)
Preceding gene: 17547998
Following gene: 17548000
Centisome position: 95.06
GC content: 65.64
Gene sequence:
>783_bases ATGCCGAAGCTGGCTGCCAACCTGACCATGCTGTTCAACGAACACGCCTTCCTCGAGCGCTTCGAAGCCGCCGCGCGCGC GGGCTTCCGCGGCGTGGAGTTCCTGTTCCCCTACGCCTGCCACGCCGACCAGATCGCCGATCGGCTGCACCGCTTCCAGC TCGACCTGGTGCTGCACAACCTGCCTGCCGGCCACTGGGATGCCGGCGAACGCGGCATCGCCGTGCTGCCCGATCGCGTG GGCGAGTTCCAGGACGGCGTGGGTGAGGCGATCCGGTACGCCAAGGTGCTGGGCGTGCGGCAACTCAACTGCCTGGCGGG CATCCGCCCCGAATCGGTGAGCGAGGATGTGGCGCGCCGCACGCTGGTCGACAACCTGACGTTCGCGGCCAAGGCACTGG CGGCCGAGCAGATCGATCTGCTGATCGAGCCGATCAACACCTTCGATCTGCCCGGCTTCTATCTGTGCCGCACGCAGCAG GCACTGGACCTGATCGCCGACGTGGGCGCGGACAACCTGTTCGTGCAGTACGACATCTATCACATGCAGCGGATGGAGGG CGAGGTGGCCAACACGCTGCGCCGTCATCTCGACCGCATCCGCCATGTGCAGTTGGCGGACACCCCCGGGCGCAATGAGC CCGGCACCGGCGAGATCAACTACCCGTTCCTGTTCCGATGGCTGGATGAGATTGGCTACGACGGCTGGGTTGGATGTGAG TACAAACCCAAGGCTGGGACGGTTGAGGGGCTGGGCTGGAGGTCGGCTTACAAGGTTGCTTGA
Upstream 100 bases:
>100_bases ACGTGGTCGAGTTCGACACGCCCCTCGACCTGCAAGACACGCTGGACGAAGCCGAAGGCGCCACCACCTGAGCACACGCA CCACAGACACGGAGACCGAC
Downstream 100 bases:
>100_bases TGGGGTGTTTGCCTTTGTTTGGGTGTTGGTGGTGCAGCGGTGCTGGGCTTGGTGGTGCAACCCTTGTTTCATCCCCTGCC GGGGCTGACTCACTTTCTTT
Product: hydroxypyruvate isomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MPKLAANLTMLFNEHAFLERFEAAARAGFRGVEFLFPYACHADQIADRLHRFQLDLVLHNLPAGHWDAGERGIAVLPDRV GEFQDGVGEAIRYAKVLGVRQLNCLAGIRPESVSEDVARRTLVDNLTFAAKALAAEQIDLLIEPINTFDLPGFYLCRTQQ ALDLIADVGADNLFVQYDIYHMQRMEGEVANTLRRHLDRIRHVQLADTPGRNEPGTGEINYPFLFRWLDEIGYDGWVGCE YKPKAGTVEGLGWRSAYKVA
Sequences:
>Translated_260_residues MPKLAANLTMLFNEHAFLERFEAAARAGFRGVEFLFPYACHADQIADRLHRFQLDLVLHNLPAGHWDAGERGIAVLPDRV GEFQDGVGEAIRYAKVLGVRQLNCLAGIRPESVSEDVARRTLVDNLTFAAKALAAEQIDLLIEPINTFDLPGFYLCRTQQ ALDLIADVGADNLFVQYDIYHMQRMEGEVANTLRRHLDRIRHVQLADTPGRNEPGTGEINYPFLFRWLDEIGYDGWVGCE YKPKAGTVEGLGWRSAYKVA >Mature_259_residues PKLAANLTMLFNEHAFLERFEAAARAGFRGVEFLFPYACHADQIADRLHRFQLDLVLHNLPAGHWDAGERGIAVLPDRVG EFQDGVGEAIRYAKVLGVRQLNCLAGIRPESVSEDVARRTLVDNLTFAAKALAAEQIDLLIEPINTFDLPGFYLCRTQQA LDLIADVGADNLFVQYDIYHMQRMEGEVANTLRRHLDRIRHVQLADTPGRNEPGTGEINYPFLFRWLDEIGYDGWVGCEY KPKAGTVEGLGWRSAYKVA
Specific function: Catalyzes the reversible isomerization between hydroxypyruvate and 2-hydroxy-3-oxopropanoate (also termed tartronate semialdehyde) [H]
COG id: COG3622
COG function: function code G; Hydroxypyruvate isomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hyi family [H]
Homologues:
Organism=Homo sapiens, GI300068962, Length=262, Percent_Identity=40.0763358778626, Blast_Score=184, Evalue=6e-47, Organism=Homo sapiens, GI300068964, Length=243, Percent_Identity=38.6831275720165, Blast_Score=158, Evalue=5e-39, Organism=Escherichia coli, GI1786718, Length=258, Percent_Identity=56.2015503875969, Blast_Score=298, Evalue=2e-82, Organism=Escherichia coli, GI1789095, Length=258, Percent_Identity=41.4728682170543, Blast_Score=217, Evalue=7e-58, Organism=Caenorhabditis elegans, GI17552022, Length=254, Percent_Identity=35.8267716535433, Blast_Score=166, Evalue=1e-41, Organism=Drosophila melanogaster, GI17530883, Length=257, Percent_Identity=37.7431906614786, Blast_Score=166, Evalue=1e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017643 - InterPro: IPR013022 - InterPro: IPR012307 [H]
Pfam domain/function: PF01261 AP_endonuc_2 [H]
EC number: =5.3.1.22 [H]
Molecular weight: Translated: 29259; Mature: 29127
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKLAANLTMLFNEHAFLERFEAAARAGFRGVEFLFPYACHADQIADRLHRFQLDLVLHN CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LPAGHWDAGERGIAVLPDRVGEFQDGVGEAIRYAKVLGVRQLNCLAGIRPESVSEDVARR CCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH TLVDNLTFAAKALAAEQIDLLIEPINTFDLPGFYLCRTQQALDLIADVGADNLFVQYDIY HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCEEEEEHHH HMQRMEGEVANTLRRHLDRIRHVQLADTPGRNEPGTGEINYPFLFRWLDEIGYDGWVGCE HHHHHCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCEECCE YKPKAGTVEGLGWRSAYKVA ECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PKLAANLTMLFNEHAFLERFEAAARAGFRGVEFLFPYACHADQIADRLHRFQLDLVLHN CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LPAGHWDAGERGIAVLPDRVGEFQDGVGEAIRYAKVLGVRQLNCLAGIRPESVSEDVARR CCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH TLVDNLTFAAKALAAEQIDLLIEPINTFDLPGFYLCRTQQALDLIADVGADNLFVQYDIY HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCEEEEEHHH HMQRMEGEVANTLRRHLDRIRHVQLADTPGRNEPGTGEINYPFLFRWLDEIGYDGWVGCE HHHHHCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCEECCE YKPKAGTVEGLGWRSAYKVA ECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8440684; 10561547; 9278503 [H]