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The map label for this gene is yraP [C]

Identifier: 17547981

GI number: 17547981

Start: 3516874

End: 3517689

Strand: Reverse

Name: yraP [C]

Synonym: RSc3264

Alternate gene names: 17547981

Gene position: 3517689-3516874 (Counterclockwise)

Preceding gene: 17547982

Following gene: 17547980

Centisome position: 94.65

GC content: 69.61

Gene sequence:

>816_bases
ATGAAACTCCCGTTGCCCACGTCTGCCCGTCTCAAGCGCACCGTCGTGCTGGCCGCCCTGGCCGGCATCACCGCCACGCA
GCTGACGGCGTGCTTCCCGCTGTTTGCCGGTGCCGTGGCCGGCGGTGTGGCGCTGGCCACCGACCGCCGCCCGACCGCCA
CGCAGACCATCGACCGCGGCCTGCAGATGGAGGCCGAGAACTCCCTGATCGCGCGCTACAGCGGCCTGGCGCACGTGAAC
GTGACGGTCTACAACCGCAAGGTGCTGCTGACCGGCGAGGCCCGCGACGAGCAGGTCAAGCAGCAGATCAGCCAGTACGC
GCAGAAACTGGAGAACGCCCGCGAGGTGGTCAACGAGATGACCATCGGCGAGTTCAGTTCGTTCGGCGCGCGCACCAACG
ACACCTACCTGACCACCAAGGTGAAGGCCGCGCTGGCCGGCACCGAGGGGCTGCCCTGGAACTCGATCAAGGTGACCACG
GAGGCGCAGGCCGTCTACCTGATGGGCGTGGTGACCGAATCCGAGGGCGAGCACGCCACCGAGGTCGCGCGCACGGTAGG
CGGCGTGGGCAAGGTGGTCAAGGTGTTCGACTATGTCAGCGAAGACGAGCGCAAGCGCCTGGACGCGAACGCCTCGTCGA
CCAACCCGTCGACCCCATCCGGTGCATCGCAAACCACGCAGGCGCCGCAGGGCACCTCGACCGCCACGCAGGCGCCGGCA
CCGGTGACCTCTTCTTCGCCCGGCCAGCCCGGCGCGGGCGCGACCGTGTCGCCGACCACGCTGCCGGCGTTGCCGCCGGG
CCGGCAGTTGCCGTAA

Upstream 100 bases:

>100_bases
CACGCGCATTGAATGGATGCGCGATGCCTTCGGTGTCGAAGCCTGAGCTGGACCCGATTCACCCGATTCCTCCAACCCTT
CCGGACTCCACAAGGACAGC

Downstream 100 bases:

>100_bases
GCAGCATCGCTCCACAGAAAACGCAGCCGCCGCGCTGCGTTTTTTGTTGCATTGTGTGCCGCGCGGCATGCCGCGCACCG
CCGCGTGTTAGCGTATGCCG

Product: signal peptide protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MKLPLPTSARLKRTVVLAALAGITATQLTACFPLFAGAVAGGVALATDRRPTATQTIDRGLQMEAENSLIARYSGLAHVN
VTVYNRKVLLTGEARDEQVKQQISQYAQKLENAREVVNEMTIGEFSSFGARTNDTYLTTKVKAALAGTEGLPWNSIKVTT
EAQAVYLMGVVTESEGEHATEVARTVGGVGKVVKVFDYVSEDERKRLDANASSTNPSTPSGASQTTQAPQGTSTATQAPA
PVTSSSPGQPGAGATVSPTTLPALPPGRQLP

Sequences:

>Translated_271_residues
MKLPLPTSARLKRTVVLAALAGITATQLTACFPLFAGAVAGGVALATDRRPTATQTIDRGLQMEAENSLIARYSGLAHVN
VTVYNRKVLLTGEARDEQVKQQISQYAQKLENAREVVNEMTIGEFSSFGARTNDTYLTTKVKAALAGTEGLPWNSIKVTT
EAQAVYLMGVVTESEGEHATEVARTVGGVGKVVKVFDYVSEDERKRLDANASSTNPSTPSGASQTTQAPQGTSTATQAPA
PVTSSSPGQPGAGATVSPTTLPALPPGRQLP
>Mature_271_residues
MKLPLPTSARLKRTVVLAALAGITATQLTACFPLFAGAVAGGVALATDRRPTATQTIDRGLQMEAENSLIARYSGLAHVN
VTVYNRKVLLTGEARDEQVKQQISQYAQKLENAREVVNEMTIGEFSSFGARTNDTYLTTKVKAALAGTEGLPWNSIKVTT
EAQAVYLMGVVTESEGEHATEVARTVGGVGKVVKVFDYVSEDERKRLDANASSTNPSTPSGASQTTQAPQGTSTATQAPA
PVTSSSPGQPGAGATVSPTTLPALPPGRQLP

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 BON domains [H]

Homologues:

Organism=Escherichia coli, GI1789540, Length=157, Percent_Identity=36.3057324840764, Blast_Score=94, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007055
- InterPro:   IPR014004 [H]

Pfam domain/function: PF04972 BON [H]

EC number: NA

Molecular weight: Translated: 28341; Mature: 28341

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLPLPTSARLKRTVVLAALAGITATQLTACFPLFAGAVAGGVALATDRRPTATQTIDRG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHCC
LQMEAENSLIARYSGLAHVNVTVYNRKVLLTGEARDEQVKQQISQYAQKLENAREVVNEM
CCCCCCCCCHHHHCCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TIGEFSSFGARTNDTYLTTKVKAALAGTEGLPWNSIKVTTEAQAVYLMGVVTESEGEHAT
HHHHHHHCCCCCCCCEEEEEHHHHHCCCCCCCCCCEEEEECCCEEEEEEEEECCCCCHHH
EVARTVGGVGKVVKVFDYVSEDERKRLDANASSTNPSTPSGASQTTQAPQGTSTATQAPA
HHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PVTSSSPGQPGAGATVSPTTLPALPPGRQLP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKLPLPTSARLKRTVVLAALAGITATQLTACFPLFAGAVAGGVALATDRRPTATQTIDRG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHCC
LQMEAENSLIARYSGLAHVNVTVYNRKVLLTGEARDEQVKQQISQYAQKLENAREVVNEM
CCCCCCCCCHHHHCCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TIGEFSSFGARTNDTYLTTKVKAALAGTEGLPWNSIKVTTEAQAVYLMGVVTESEGEHAT
HHHHHHHCCCCCCCCEEEEEHHHHHCCCCCCCCCCEEEEECCCEEEEEEEEECCCCCHHH
EVARTVGGVGKVVKVFDYVSEDERKRLDANASSTNPSTPSGASQTTQAPQGTSTATQAPA
HHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PVTSSSPGQPGAGATVSPTTLPALPPGRQLP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]