| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17547870
Identifier: 17547870
GI number: 17547870
Start: 3401819
End: 3403942
Strand: Direct
Name: 17547870
Synonym: RSc3151
Alternate gene names: NA
Gene position: 3401819-3403942 (Clockwise)
Preceding gene: 17547869
Following gene: 17547875
Centisome position: 91.54
GC content: 67.04
Gene sequence:
>2124_bases ATGGGTATTACCGTCATGCCGGGCCTCACCAGCATGGAAAGCGATACGCGCACGCAGCGGATTTCGACAACGATCGGCCA GGCCAGGCTGAACGGCCGGTTCTATCGGCATCCCGATTCCGCATTGGTTTCGTATCCCGTCGCGGTCGACAATGCGCTCG GCGCGCTGCCGGATCGCGCCTACAACATCGCGATCGTCGGCGGCGGCGCGGCCGGGATCGCATCGCTGTACGAACTGTCG CGGCTCGCGAAGACACTCTCGGCCGGGACGATGACCGTCACGCTCTACGAATCCGATCCGGACAGTTTCCTCACCAGGCT TGAAGCCGGCACCCAGGCCATCAACGTGCGCGGGCTCAAGGCCGGCCGCGTCTCCGCCGCCCGCGTCAACCAGAACGACA CGGTGTACGAAGTCGGCGCGATGCGCTTTCCGGAAATCGCCGGGCTGACGTGGCACTACGCGAGTGTCGTGTACGGCGAC GGCGCGCCGATCAAGGTGTTCCCGAATCCCGGCAAGGTGCCGACCGAATTCATGTTCGGTGACCGCATCGACCGCTACAG CGGCAGTGCGCCCGAGGATTGGCTGGACCGGGAATCGCCGGCGCGCAAGGTGTTTCTCGTGGTCGCGAGCGGGCTCGCCG GCGCGCCCGACAGCCAAACGCCCATCGCACTCTTTCCGATCGGCGGCCGCGATCCGGTGCAGGTCGCGCAGTTGCTGAAA AGCGAAACGGCCGGACCCGCGCAGCTGCGGGCCATTCAGGAGCGCGACTGGCCGGCCTTCATCGCGGCGCACGACGGCAC CACGCTCGAAGCGGCCGTCCGGCGCATCGTGACGCGCGAGATCGGCAAGGGTGCCGCGAGCAGCCTGCCGCCGATCGCCG GCCTCGACCCGGCGGAGACGATCAACTACTACGTCGAGCTGTTCGGCCGCTTCGGTTTTGGCACGGGCGGGTTCAAGCCG CTGTTCAACATCTCGCTCGTCGAGATGATGCGGCTGATCCTGTGGGACTACTCGAACGAATACACGCTGCCCGTCGAGGA GAATGTCGAATTCATCGCTGGCCTGTATCAGAAAGCGCTTGAGCAGGGCGGCTCGCGCCTGACGGTCAATGTGCGCCGGG AGCGGGTCTCCGATGTCTGCCACTCCGACGCCGCGCGTGTCCGGCAGCCGTTTGTGGTTGCGTACGATCGGGCGGGCAAG CTCTCGGCGCCCAACTACGATTACGTCATCCTGGCCGCCCCGCAGGACCAGCTCGCCTTGGCGGTCAGCCGATCCGGATA CGCGTTCGGGCCGGCCAGCCTCGTGCTGGGCGACGGCGCGCTGGGGCTGGGCACGATCACCATCCGGGACGCCCTCCCCC CGCTGCTGCTCAGCGATACCAGCTCGGCGCCGAACGCGCGCATCGTGACGGCACTGAACCAGCTCCACATGGTCCGGTCG TCCAAGGTCTTCGGCACCATCGAAACGGCGAGGCTCGATGAGCCGTTCGTGCCGCGCCTCAAGGGCCAGCCGATCAAGGC GGTCGTATCGGACTCCGGCCTCGCCGCCAGCTACGTGGTGCCCAGCCCCACGGAGCCGGGCGCGCCGCGCTATTCGAGCT TTCTCGCCAGCTACACGTGGGGCGACGACTCGACGCGGCTGCAGCACAACTTCGGCTACTACCCGCAGAATCCGCCGACG AGCGACGGAACCGCGACCGCCATGTTCAGGACGATGATCAACCGTGCCACGCGCAACGTGCGGGACCCGGCCGAGCCGGC GGCCGCGCCGGCCGTCTGGTGGTTTTCGCAACTGCTGAGCCGGGTTCGCGAACAAGACCGCTTCGTGTTCGACTGGACCA CCAACGGCACGGCCGGCGGCTTCAAGCTCGACGGCACGGGCGATCACCATCAGAGCAATCTCTGCTTCCGGTATCACACG CATGCGCTCAACCCCAGGCTCGGGAATCGCTTCTTCCTCGCCAGCGATAGCTATAGCCATCTCGGTGGCTGGCTGGAAGG CGCGTTCATGAGTGCGATCAATGCGGTGGCCGGCCTGGTCGTGGCGGCCAATGGCGGCAATGCGGGGGCACTGAGCAACG CGGCGCGCGAGGTCGTCACGGGGTTGCGGCCCATCGCGCCGTAG
Upstream 100 bases:
>100_bases CGCCCCACCCGTCATCGCGTCATGATGGGCAGGATGCCTGCGCCTGCCGGACTGCAGTCCCCCGCTTCATTCACCGCAAC ATTCACGATGGAGAAGTGCC
Downstream 100 bases:
>100_bases GCTGCGCGGATGCGGATGATGTGAGCGGATCATCGATGCGCGGGCGTCATTGAAGCCCGCGCATCGATCGAGATACCCGG CGCCGGATCGCGGCGCCGTT
Product: tryptophan 2-monooxygenase oxidoreductase
Products: indole-3-acetamide; CO2; H2O
Alternate protein names: NA
Number of amino acids: Translated: 707; Mature: 706
Protein sequence:
>707_residues MGITVMPGLTSMESDTRTQRISTTIGQARLNGRFYRHPDSALVSYPVAVDNALGALPDRAYNIAIVGGGAAGIASLYELS RLAKTLSAGTMTVTLYESDPDSFLTRLEAGTQAINVRGLKAGRVSAARVNQNDTVYEVGAMRFPEIAGLTWHYASVVYGD GAPIKVFPNPGKVPTEFMFGDRIDRYSGSAPEDWLDRESPARKVFLVVASGLAGAPDSQTPIALFPIGGRDPVQVAQLLK SETAGPAQLRAIQERDWPAFIAAHDGTTLEAAVRRIVTREIGKGAASSLPPIAGLDPAETINYYVELFGRFGFGTGGFKP LFNISLVEMMRLILWDYSNEYTLPVEENVEFIAGLYQKALEQGGSRLTVNVRRERVSDVCHSDAARVRQPFVVAYDRAGK LSAPNYDYVILAAPQDQLALAVSRSGYAFGPASLVLGDGALGLGTITIRDALPPLLLSDTSSAPNARIVTALNQLHMVRS SKVFGTIETARLDEPFVPRLKGQPIKAVVSDSGLAASYVVPSPTEPGAPRYSSFLASYTWGDDSTRLQHNFGYYPQNPPT SDGTATAMFRTMINRATRNVRDPAEPAAAPAVWWFSQLLSRVREQDRFVFDWTTNGTAGGFKLDGTGDHHQSNLCFRYHT HALNPRLGNRFFLASDSYSHLGGWLEGAFMSAINAVAGLVVAANGGNAGALSNAAREVVTGLRPIAP
Sequences:
>Translated_707_residues MGITVMPGLTSMESDTRTQRISTTIGQARLNGRFYRHPDSALVSYPVAVDNALGALPDRAYNIAIVGGGAAGIASLYELS RLAKTLSAGTMTVTLYESDPDSFLTRLEAGTQAINVRGLKAGRVSAARVNQNDTVYEVGAMRFPEIAGLTWHYASVVYGD GAPIKVFPNPGKVPTEFMFGDRIDRYSGSAPEDWLDRESPARKVFLVVASGLAGAPDSQTPIALFPIGGRDPVQVAQLLK SETAGPAQLRAIQERDWPAFIAAHDGTTLEAAVRRIVTREIGKGAASSLPPIAGLDPAETINYYVELFGRFGFGTGGFKP LFNISLVEMMRLILWDYSNEYTLPVEENVEFIAGLYQKALEQGGSRLTVNVRRERVSDVCHSDAARVRQPFVVAYDRAGK LSAPNYDYVILAAPQDQLALAVSRSGYAFGPASLVLGDGALGLGTITIRDALPPLLLSDTSSAPNARIVTALNQLHMVRS SKVFGTIETARLDEPFVPRLKGQPIKAVVSDSGLAASYVVPSPTEPGAPRYSSFLASYTWGDDSTRLQHNFGYYPQNPPT SDGTATAMFRTMINRATRNVRDPAEPAAAPAVWWFSQLLSRVREQDRFVFDWTTNGTAGGFKLDGTGDHHQSNLCFRYHT HALNPRLGNRFFLASDSYSHLGGWLEGAFMSAINAVAGLVVAANGGNAGALSNAAREVVTGLRPIAP >Mature_706_residues GITVMPGLTSMESDTRTQRISTTIGQARLNGRFYRHPDSALVSYPVAVDNALGALPDRAYNIAIVGGGAAGIASLYELSR LAKTLSAGTMTVTLYESDPDSFLTRLEAGTQAINVRGLKAGRVSAARVNQNDTVYEVGAMRFPEIAGLTWHYASVVYGDG APIKVFPNPGKVPTEFMFGDRIDRYSGSAPEDWLDRESPARKVFLVVASGLAGAPDSQTPIALFPIGGRDPVQVAQLLKS ETAGPAQLRAIQERDWPAFIAAHDGTTLEAAVRRIVTREIGKGAASSLPPIAGLDPAETINYYVELFGRFGFGTGGFKPL FNISLVEMMRLILWDYSNEYTLPVEENVEFIAGLYQKALEQGGSRLTVNVRRERVSDVCHSDAARVRQPFVVAYDRAGKL SAPNYDYVILAAPQDQLALAVSRSGYAFGPASLVLGDGALGLGTITIRDALPPLLLSDTSSAPNARIVTALNQLHMVRSS KVFGTIETARLDEPFVPRLKGQPIKAVVSDSGLAASYVVPSPTEPGAPRYSSFLASYTWGDDSTRLQHNFGYYPQNPPTS DGTATAMFRTMINRATRNVRDPAEPAAAPAVWWFSQLLSRVREQDRFVFDWTTNGTAGGFKLDGTGDHHQSNLCFRYHTH ALNPRLGNRFFLASDSYSHLGGWLEGAFMSAINAVAGLVVAANGGNAGALSNAAREVVTGLRPIAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.13.12.3
Molecular weight: Translated: 76082; Mature: 75951
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGITVMPGLTSMESDTRTQRISTTIGQARLNGRFYRHPDSALVSYPVAVDNALGALPDRA CCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCEEECCHHHHHHHCCCCCC YNIAIVGGGAAGIASLYELSRLAKTLSAGTMTVTLYESDPDSFLTRLEAGTQAINVRGLK EEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHCCCEEEEEECCC AGRVSAARVNQNDTVYEVGAMRFPEIAGLTWHYASVVYGDGAPIKVFPNPGKVPTEFMFG CCCCEEEEECCCCCEEEECCCCCCHHCCCEEEEEEEEECCCCCEEECCCCCCCCCHHHHC DRIDRYSGSAPEDWLDRESPARKVFLVVASGLAGAPDSQTPIALFPIGGRDPVQVAQLLK CCHHHCCCCCCHHHHCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHH SETAGPAQLRAIQERDWPAFIAAHDGTTLEAAVRRIVTREIGKGAASSLPPIAGLDPAET HCCCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH INYYVELFGRFGFGTGGFKPLFNISLVEMMRLILWDYSNEYTLPVEENVEFIAGLYQKAL HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCHHCCHHHHHHHHHHHH EQGGSRLTVNVRRERVSDVCHSDAARVRQPFVVAYDRAGKLSAPNYDYVILAAPQDQLAL HCCCCEEEEEEHHHHHHHHHHCCHHHHCCCEEEEECCCCCCCCCCCCEEEEECCCCCEEE AVSRSGYAFGPASLVLGDGALGLGTITIRDALPPLLLSDTSSAPNARIVTALNQLHMVRS EEECCCCEECCCEEEEECCCCCEEEEEEHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHC SKVFGTIETARLDEPFVPRLKGQPIKAVVSDSGLAASYVVPSPTEPGAPRYSSFLASYTW CCEEEEEEHHCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHEEC GDDSTRLQHNFGYYPQNPPTSDGTATAMFRTMINRATRNVRDPAEPAAAPAVWWFSQLLS CCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH RVREQDRFVFDWTTNGTAGGFKLDGTGDHHQSNLCFRYHTHALNPRLGNRFFLASDSYSH HHHHCCCEEEEEECCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCHHH LGGWLEGAFMSAINAVAGLVVAANGGNAGALSNAAREVVTGLRPIAP HHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GITVMPGLTSMESDTRTQRISTTIGQARLNGRFYRHPDSALVSYPVAVDNALGALPDRA CEEECCCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCEEECCHHHHHHHCCCCCC YNIAIVGGGAAGIASLYELSRLAKTLSAGTMTVTLYESDPDSFLTRLEAGTQAINVRGLK EEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHCCCEEEEEECCC AGRVSAARVNQNDTVYEVGAMRFPEIAGLTWHYASVVYGDGAPIKVFPNPGKVPTEFMFG CCCCEEEEECCCCCEEEECCCCCCHHCCCEEEEEEEEECCCCCEEECCCCCCCCCHHHHC DRIDRYSGSAPEDWLDRESPARKVFLVVASGLAGAPDSQTPIALFPIGGRDPVQVAQLLK CCHHHCCCCCCHHHHCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHH SETAGPAQLRAIQERDWPAFIAAHDGTTLEAAVRRIVTREIGKGAASSLPPIAGLDPAET HCCCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH INYYVELFGRFGFGTGGFKPLFNISLVEMMRLILWDYSNEYTLPVEENVEFIAGLYQKAL HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCHHCCHHHHHHHHHHHH EQGGSRLTVNVRRERVSDVCHSDAARVRQPFVVAYDRAGKLSAPNYDYVILAAPQDQLAL HCCCCEEEEEEHHHHHHHHHHCCHHHHCCCEEEEECCCCCCCCCCCCEEEEECCCCCEEE AVSRSGYAFGPASLVLGDGALGLGTITIRDALPPLLLSDTSSAPNARIVTALNQLHMVRS EEECCCCEECCCEEEEECCCCCEEEEEEHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHC SKVFGTIETARLDEPFVPRLKGQPIKAVVSDSGLAASYVVPSPTEPGAPRYSSFLASYTW CCEEEEEEHHCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHEEC GDDSTRLQHNFGYYPQNPPTSDGTATAMFRTMINRATRNVRDPAEPAAAPAVWWFSQLLS CCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH RVREQDRFVFDWTTNGTAGGFKLDGTGDHHQSNLCFRYHTHALNPRLGNRFFLASDSYSH HHHHCCCEEEEEECCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCHHH LGGWLEGAFMSAINAVAGLVVAANGGNAGALSNAAREVVTGLRPIAP HHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-tryptophan; O2
Specific reaction: L-tryptophan + O2 = indole-3-acetamide + CO2 + H2O
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA