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The map label for this gene is 17547860

Identifier: 17547860

GI number: 17547860

Start: 3391119

End: 3391673

Strand: Reverse

Name: 17547860

Synonym: RSc3141

Alternate gene names: NA

Gene position: 3391673-3391119 (Counterclockwise)

Preceding gene: 17547861

Following gene: 17547859

Centisome position: 91.26

GC content: 71.89

Gene sequence:

>555_bases
ATGACGATCCGGACGATCGCTGCGGGAGTCGGGGGCGCGCTGTGGCTGGCCGGTTGCGCGACAACGTACAGCGAGCCGCC
GCCGCAGGCACGGACGGCATCGGTCGAGCTGGTCCGGTTGCCCGGCGGCGCGCCGGCCATGCTCGTCTTCGACGATGCGA
AGATGTGCGCCGGCGCGCGGGTGGCGATCCCTTCCAACAGCCCGGTCCGGCCGGTCCGCGTGCTGGCCGAGGTGCCGACG
ACCGTGGCCGCCAATCACGCGCGTGTCAACGGCAGCTCGGTCTACCGCTGCGCGGTGGCGGTGAGCTTCGTCCCCGAGAC
GGGACACCGGTACCGGCTGCTCTCGCAGTATCCGGATGGCGAGCACACCTGCCGTGCCGCGCTGACGGAATCCACCGACG
GCAGGCGCTGGCGGCCGGCCGTTGCGCGCTATCGGCAATGGAGCGGGCAGGCCACGTGCCCGGCCCTGACGGATGCGGAG
ATCGGCCGCCTGCGCGACAACACGCGCTCACCGGACGGCGCCACCACGCTCAACGACCTGAAGGACCTGATGTGA

Upstream 100 bases:

>100_bases
TATCGGCCCGACCTTTGGTTACACTTGCGCGATGCCCCGCGCCGTCTTGACGTGCGGTGGCCGATCGGGCAGACCAAACA
AAAGAAAGGCAGGGGGGCGC

Downstream 100 bases:

>100_bases
TGGCACCCTCGACCGGTCCGTGTTTTCCATCTGAGGGCGCCGCCAGGCCTGTTCTCCGATCCGCTCTCCGTCTGGCCGTT
GCGGCCGTCTGCGGCCTGGC

Product: lipoprotein transmembrane

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MTIRTIAAGVGGALWLAGCATTYSEPPPQARTASVELVRLPGGAPAMLVFDDAKMCAGARVAIPSNSPVRPVRVLAEVPT
TVAANHARVNGSSVYRCAVAVSFVPETGHRYRLLSQYPDGEHTCRAALTESTDGRRWRPAVARYRQWSGQATCPALTDAE
IGRLRDNTRSPDGATTLNDLKDLM

Sequences:

>Translated_184_residues
MTIRTIAAGVGGALWLAGCATTYSEPPPQARTASVELVRLPGGAPAMLVFDDAKMCAGARVAIPSNSPVRPVRVLAEVPT
TVAANHARVNGSSVYRCAVAVSFVPETGHRYRLLSQYPDGEHTCRAALTESTDGRRWRPAVARYRQWSGQATCPALTDAE
IGRLRDNTRSPDGATTLNDLKDLM
>Mature_183_residues
TIRTIAAGVGGALWLAGCATTYSEPPPQARTASVELVRLPGGAPAMLVFDDAKMCAGARVAIPSNSPVRPVRVLAEVPTT
VAANHARVNGSSVYRCAVAVSFVPETGHRYRLLSQYPDGEHTCRAALTESTDGRRWRPAVARYRQWSGQATCPALTDAEI
GRLRDNTRSPDGATTLNDLKDLM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19662; Mature: 19530

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRTIAAGVGGALWLAGCATTYSEPPPQARTASVELVRLPGGAPAMLVFDDAKMCAGAR
CCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCHHCCCCE
VAIPSNSPVRPVRVLAEVPTTVAANHARVNGSSVYRCAVAVSFVPETGHRYRLLSQYPDG
EEECCCCCCHHHHHHHHCCCHHHCCCEEECCCCEEEEEEEEEECCCCCCEEEEECCCCCC
EHTCRAALTESTDGRRWRPAVARYRQWSGQATCPALTDAEIGRLRDNTRSPDGATTLNDL
CHHHHHHHCCCCCCCEECHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHH
KDLM
HHCC
>Mature Secondary Structure 
TIRTIAAGVGGALWLAGCATTYSEPPPQARTASVELVRLPGGAPAMLVFDDAKMCAGAR
CEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCHHCCCCE
VAIPSNSPVRPVRVLAEVPTTVAANHARVNGSSVYRCAVAVSFVPETGHRYRLLSQYPDG
EEECCCCCCHHHHHHHHCCCHHHCCCEEECCCCEEEEEEEEEECCCCCCEEEEECCCCCC
EHTCRAALTESTDGRRWRPAVARYRQWSGQATCPALTDAEIGRLRDNTRSPDGATTLNDL
CHHHHHHHCCCCCCCEECHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHH
KDLM
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA