Click here to switch to the map view.

The map label for this gene is 17547804

Identifier: 17547804

GI number: 17547804

Start: 3323029

End: 3323367

Strand: Reverse

Name: 17547804

Synonym: RSc3085

Alternate gene names: NA

Gene position: 3323367-3323029 (Counterclockwise)

Preceding gene: 17547807

Following gene: 17547803

Centisome position: 89.42

GC content: 65.19

Gene sequence:

>339_bases
ATGCGTGAGCCGAACTGTTCCCCGCAATTGCTGGCGTTCGTGCGCCAACGCCAGCTCATCGCGCAGCTCGCCGCGCAGGC
CGGGAAAGCCGGTAAGCGCGTGCAGGCACCGGACGCGGATGCCGTGCGGCAACTCGATGTCGTGAGCGAACTGATCTGCG
AGACCACGGAGCAGGCGTGTTCGCAACTGCTGAACGTGAGCGCGGGGCTCGCGGGCATCCTGCAACTGCTGGATCTGCGG
AGCGAGCGGTCGGCGGAATGCCACAGCCTGCATTGCCTGCTGGCGCCGCTGAAGAGGCAACTGGACCGATCGCTGAACGA
CGTTCAGAAGATGCTCTGA

Upstream 100 bases:

>100_bases
ATGCCTGATGCCTGCGCTCGTCCCGGGCGAGTCGCATTTTCCATCCGCCGTACCGCCGTGCTGGACGCCGCCATCTCACC
CTCACCTGCGGAGGTTGGGT

Downstream 100 bases:

>100_bases
GGAACGCGCGGAAGCGGACGGAAAACCCGGCGCGCAGTGAATTCCGCGGGGTAGGCCGCTTCCGCATTGGGGATAACTCG
CCCTGCGGCTGTGGGCAACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MREPNCSPQLLAFVRQRQLIAQLAAQAGKAGKRVQAPDADAVRQLDVVSELICETTEQACSQLLNVSAGLAGILQLLDLR
SERSAECHSLHCLLAPLKRQLDRSLNDVQKML

Sequences:

>Translated_112_residues
MREPNCSPQLLAFVRQRQLIAQLAAQAGKAGKRVQAPDADAVRQLDVVSELICETTEQACSQLLNVSAGLAGILQLLDLR
SERSAECHSLHCLLAPLKRQLDRSLNDVQKML
>Mature_112_residues
MREPNCSPQLLAFVRQRQLIAQLAAQAGKAGKRVQAPDADAVRQLDVVSELICETTEQACSQLLNVSAGLAGILQLLDLR
SERSAECHSLHCLLAPLKRQLDRSLNDVQKML

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12288; Mature: 12288

Theoretical pI: Translated: 7.86; Mature: 7.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREPNCSPQLLAFVRQRQLIAQLAAQAGKAGKRVQAPDADAVRQLDVVSELICETTEQAC
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SQLLNVSAGLAGILQLLDLRSERSAECHSLHCLLAPLKRQLDRSLNDVQKML
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MREPNCSPQLLAFVRQRQLIAQLAAQAGKAGKRVQAPDADAVRQLDVVSELICETTEQAC
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SQLLNVSAGLAGILQLLDLRSERSAECHSLHCLLAPLKRQLDRSLNDVQKML
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA