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The map label for this gene is 17547803

Identifier: 17547803

GI number: 17547803

Start: 3321077

End: 3321961

Strand: Reverse

Name: 17547803

Synonym: RSc3084

Alternate gene names: NA

Gene position: 3321961-3321077 (Counterclockwise)

Preceding gene: 17547804

Following gene: 17547802

Centisome position: 89.39

GC content: 68.14

Gene sequence:

>885_bases
ATGAGCGACGCGCAGCACGACGAACACGAGCCCCTGATCAAGACCCCCAAGCAACTGATCATCGCGGTGATCGCCGCGTT
TGCTGTTCCGATTCTCGTCATCATCCTGCTGGCCAACTATGTCGGCCTTGGTGTCAAGGAGGGCGCGGGCAGTTCCGGCA
TGTCGGAAGAGGCCGTCAATGATCGGATCAAGCCGGTTGCGCATCTCGAGCTGAAGGACGTGAACGCGCCGCACGTCTAT
AAGACCGGGGAGCAACTCTACAAGGAAGTCTGCGCGACTTGTCACGCAGCGGGCGTGGCCGGCGCGCCCAAGTTTGGCGA
TGCGGCCAGCTGGGCATCGCGCCTGCCGCAAGGCCTGGACGGCCTGACCAAGGTGGCGCTTGCCGGCAAGGGTGGCATGC
CCGCGCGCGGCGGTACCTCGCCGGATGACGTGAGCGACTACGAGATCGAGCGCGCGATCGTCTACATGGCCAATTCGGGC
GGCGGCAAGCTGCAGGAACCGCCCGCGCCGGCCGCCGGTGCTGCGGCGCCGGCATCGGCGGCCGCACCGCAGGCGTCGGA
GGCTCCGGCTGCCGCACCTGCTGCGGCCCCCGCAGTCGCAGCCCCGGCCGCGCCCGCCGCTGCGGCAGCGCCGCAAGCCG
CCGCCGGCGACATCGGCAAGAAGGTCTACGACTCGACCTGCCAGATGTGCCACGCCGCCGGTGTGGCCGGTGCTCCCAAG
TTTGGCGACAAGGCTGCCTGGGCGCCGCGCATCGCCGAGGGCAAGGCCAAGATGTACGATATCGCGCTGCACGGCAAGGG
TGCCATGCCGCCGAAGGGCACCTATGCCGGTTCGGATGACGACGTGAAGGCCGCCGTCGATTTCATGGCTGCCGCTGCCA
AGTAA

Upstream 100 bases:

>100_bases
CCTCCGTCGCGGCCCCACGCGTTGCCGGCGATGCTCGTGATTGAAGCCGGTAGCGTCCAGACGGTCGCTGTGAGCGGTTC
CACCATCCTGAGAGTTGAGC

Downstream 100 bases:

>100_bases
CGCGCCCCGTCGCGCTCCAGGAAAGCCCGCCGCGAGCGGGCTTTTTGTTGCCTGCACGGTGGGCGGGATCGCCGCGGTAC
GCCGCTTGCTATTCCCTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: Cytochrome c555 [H]

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MSDAQHDEHEPLIKTPKQLIIAVIAAFAVPILVIILLANYVGLGVKEGAGSSGMSEEAVNDRIKPVAHLELKDVNAPHVY
KTGEQLYKEVCATCHAAGVAGAPKFGDAASWASRLPQGLDGLTKVALAGKGGMPARGGTSPDDVSDYEIERAIVYMANSG
GGKLQEPPAPAAGAAAPASAAAPQASEAPAAAPAAAPAVAAPAAPAAAAAPQAAAGDIGKKVYDSTCQMCHAAGVAGAPK
FGDKAAWAPRIAEGKAKMYDIALHGKGAMPPKGTYAGSDDDVKAAVDFMAAAAK

Sequences:

>Translated_294_residues
MSDAQHDEHEPLIKTPKQLIIAVIAAFAVPILVIILLANYVGLGVKEGAGSSGMSEEAVNDRIKPVAHLELKDVNAPHVY
KTGEQLYKEVCATCHAAGVAGAPKFGDAASWASRLPQGLDGLTKVALAGKGGMPARGGTSPDDVSDYEIERAIVYMANSG
GGKLQEPPAPAAGAAAPASAAAPQASEAPAAAPAAAPAVAAPAAPAAAAAPQAAAGDIGKKVYDSTCQMCHAAGVAGAPK
FGDKAAWAPRIAEGKAKMYDIALHGKGAMPPKGTYAGSDDDVKAAVDFMAAAAK
>Mature_293_residues
SDAQHDEHEPLIKTPKQLIIAVIAAFAVPILVIILLANYVGLGVKEGAGSSGMSEEAVNDRIKPVAHLELKDVNAPHVYK
TGEQLYKEVCATCHAAGVAGAPKFGDAASWASRLPQGLDGLTKVALAGKGGMPARGGTSPDDVSDYEIERAIVYMANSGG
GKLQEPPAPAAGAAAPASAAAPQASEAPAAAPAAAPAVAAPAAPAAAAAPQAAAGDIGKKVYDSTCQMCHAAGVAGAPKF
GDKAAWAPRIAEGKAKMYDIALHGKGAMPPKGTYAGSDDDVKAAVDFMAAAAK

Specific function: Unknown

COG id: COG3245

COG function: function code C; Cytochrome c5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR002323 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 29348; Mature: 29216

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDAQHDEHEPLIKTPKQLIIAVIAAFAVPILVIILLANYVGLGVKEGAGSSGMSEEAVN
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
DRIKPVAHLELKDVNAPHVYKTGEQLYKEVCATCHAAGVAGAPKFGDAASWASRLPQGLD
HHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHH
GLTKVALAGKGGMPARGGTSPDDVSDYEIERAIVYMANSGGGKLQEPPAPAAGAAAPASA
HHHHHHHCCCCCCCCCCCCCCCCCCHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCHH
AAPQASEAPAAAPAAAPAVAAPAAPAAAAAPQAAAGDIGKKVYDSTCQMCHAAGVAGAPK
CCCCCCCCCCCCCCCCCHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FGDKAAWAPRIAEGKAKMYDIALHGKGAMPPKGTYAGSDDDVKAAVDFMAAAAK
CCCCCCCCCCHHCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SDAQHDEHEPLIKTPKQLIIAVIAAFAVPILVIILLANYVGLGVKEGAGSSGMSEEAVN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
DRIKPVAHLELKDVNAPHVYKTGEQLYKEVCATCHAAGVAGAPKFGDAASWASRLPQGLD
HHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHH
GLTKVALAGKGGMPARGGTSPDDVSDYEIERAIVYMANSGGGKLQEPPAPAAGAAAPASA
HHHHHHHCCCCCCCCCCCCCCCCCCHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCHH
AAPQASEAPAAAPAAAPAVAAPAAPAAAAAPQAAAGDIGKKVYDSTCQMCHAAGVAGAPK
CCCCCCCCCCCCCCCCCHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FGDKAAWAPRIAEGKAKMYDIALHGKGAMPPKGTYAGSDDDVKAAVDFMAAAAK
CCCCCCCCCCHHCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 188412 [H]