| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is engB
Identifier: 17547707
GI number: 17547707
Start: 3221347
End: 3222051
Strand: Direct
Name: engB
Synonym: RSc2988
Alternate gene names: 17547707
Gene position: 3221347-3222051 (Clockwise)
Preceding gene: 17547698
Following gene: 17547708
Centisome position: 86.68
GC content: 65.67
Gene sequence:
>705_bases ATGTCGCTCCTGCATCAAGCTCGTTTCTTTACCACCGTCAACCATTTGCGCGATCTGCCGGCCACCGCCGTGCCGGAAGT CGCGTTCGCCGGCCGCTCCAACGCCGGCAAGTCCACCGCGATCAACGTGCTGTGCAACCAGAAGCGGCTGGCCTTCTCCA GCAAGACGCCCGGCCGCACGCAGCACATCAACTACTTCTCGGTGATGCCGGCGAAGGCGCTGGATCCGCTCGGCTTCCTG GTTGACCTGCCCGGCTATGGCTACGCCCAAGTGCCCGGCGAAGCCAAATCGCACTGGGAACATCTGCTGGGCGACTACAT CCAGACCCGCTCGCAGCTGGCCGGCCTCGTCATCATGATGGACGCGCGCCGGCCATTCACCGATCTCGATTGCCAGATGG TCGAGTGGTTCCTGCCCACGGGCAAGCCGATCCACGTGCTGCTCACGAAGGCCGACAAGCTGACCAACAACGATGCCTCG CGCGCGCTGATGTCGGCCCGCAAGGTGCTGGCCGGGTACCAGGCGCAGATCGAAGGCGAGGTGTCGCTGACGGTGCAGCT GTTCTCGAGCCTGAAGCGCCGCGGCATCGAAGAGGCGCAGCGCACGGTGGCGGGATGGCTGTGCCTGCCCGAGGCCATGC CGCCGTCGCCTGACGCCGAGCCGGCAAAAAAAACCCCGTCGCCAGACGCGCAACGGGGGGAATGA
Upstream 100 bases:
>100_bases CCGTAAACCGCCGTATTGTACAATAAAGCCCCTGCGGTGCGACCTCGCGGCGCAGCAACCCACCGCAGTCTACGACCGCA GTTTACAGGCATTGCCGCGC
Downstream 100 bases:
>100_bases CCCATCGAGCCGTCGATGGGGCCCGCGTCAGGGAGGCGTCGCGGGGGACACCGCAAGGAAAGGGCCGCTGCGGTGTCCGT GCATAGGACGGACAATCGTC
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MSLLHQARFFTTVNHLRDLPATAVPEVAFAGRSNAGKSTAINVLCNQKRLAFSSKTPGRTQHINYFSVMPAKALDPLGFL VDLPGYGYAQVPGEAKSHWEHLLGDYIQTRSQLAGLVIMMDARRPFTDLDCQMVEWFLPTGKPIHVLLTKADKLTNNDAS RALMSARKVLAGYQAQIEGEVSLTVQLFSSLKRRGIEEAQRTVAGWLCLPEAMPPSPDAEPAKKTPSPDAQRGE
Sequences:
>Translated_234_residues MSLLHQARFFTTVNHLRDLPATAVPEVAFAGRSNAGKSTAINVLCNQKRLAFSSKTPGRTQHINYFSVMPAKALDPLGFL VDLPGYGYAQVPGEAKSHWEHLLGDYIQTRSQLAGLVIMMDARRPFTDLDCQMVEWFLPTGKPIHVLLTKADKLTNNDAS RALMSARKVLAGYQAQIEGEVSLTVQLFSSLKRRGIEEAQRTVAGWLCLPEAMPPSPDAEPAKKTPSPDAQRGE >Mature_233_residues SLLHQARFFTTVNHLRDLPATAVPEVAFAGRSNAGKSTAINVLCNQKRLAFSSKTPGRTQHINYFSVMPAKALDPLGFLV DLPGYGYAQVPGEAKSHWEHLLGDYIQTRSQLAGLVIMMDARRPFTDLDCQMVEWFLPTGKPIHVLLTKADKLTNNDASR ALMSARKVLAGYQAQIEGEVSLTVQLFSSLKRRGIEEAQRTVAGWLCLPEAMPPSPDAEPAKKTPSPDAQRGE
Specific function: Necessary for normal cell division and for the maintenance of normal septation
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain
Homologues:
Organism=Escherichia coli, GI145693205, Length=216, Percent_Identity=43.5185185185185, Blast_Score=183, Evalue=1e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ENGB_RALSO (Q8XV43)
Other databases:
- EMBL: AL646052 - RefSeq: NP_521109.1 - ProteinModelPortal: Q8XV43 - SMR: Q8XV43 - GeneID: 1221842 - GenomeReviews: AL646052_GR - KEGG: rso:RSc2988 - NMPDR: fig|267608.1.peg.2988 - HOGENOM: HBG447097 - OMA: FSTTWED - ProtClustDB: PRK00454 - BioCyc: RSOL267608:RSC2988-MONOMER - GO: GO:0005622 - HAMAP: MF_00321 - InterPro: IPR019987 - InterPro: IPR002917 - TIGRFAMs: TIGR03598
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 25714; Mature: 25583
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLHQARFFTTVNHLRDLPATAVPEVAFAGRSNAGKSTAINVLCNQKRLAFSSKTPGRT CCHHHHHHHHHHHHHHHHCCCHHCCHHHHCCCCCCCCCCEEEEEECCHHHEECCCCCCCC QHINYFSVMPAKALDPLGFLVDLPGYGYAQVPGEAKSHWEHLLGDYIQTRSQLAGLVIMM EECCCEEECCHHHCCCCCEEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCEEEEE DARRPFTDLDCQMVEWFLPTGKPIHVLLTKADKLTNNDASRALMSARKVLAGYQAQIEGE ECCCCCCCCCHHHHHHHCCCCCCEEEEEECCHHHCCCHHHHHHHHHHHHHHHHHHEECCC VSLTVQLFSSLKRRGIEEAQRTVAGWLCLPEAMPPSPDAEPAKKTPSPDAQRGE HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SLLHQARFFTTVNHLRDLPATAVPEVAFAGRSNAGKSTAINVLCNQKRLAFSSKTPGRT CHHHHHHHHHHHHHHHHCCCHHCCHHHHCCCCCCCCCCEEEEEECCHHHEECCCCCCCC QHINYFSVMPAKALDPLGFLVDLPGYGYAQVPGEAKSHWEHLLGDYIQTRSQLAGLVIMM EECCCEEECCHHHCCCCCEEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCEEEEE DARRPFTDLDCQMVEWFLPTGKPIHVLLTKADKLTNNDASRALMSARKVLAGYQAQIEGE ECCCCCCCCCHHHHHHHCCCCCCEEEEEECCHHHCCCHHHHHHHHHHHHHHHHHHEECCC VSLTVQLFSSLKRRGIEEAQRTVAGWLCLPEAMPPSPDAEPAKKTPSPDAQRGE HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852