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The map label for this gene is yedZ

Identifier: 17547699

GI number: 17547699

Start: 3213183

End: 3213836

Strand: Reverse

Name: yedZ

Synonym: RSc2980

Alternate gene names: 17547699

Gene position: 3213836-3213183 (Counterclockwise)

Preceding gene: 17547700

Following gene: 17547696

Centisome position: 86.48

GC content: 68.5

Gene sequence:

>654_bases
ATGCTGCCCTCGATGCTGCCCCCCAAATCGCTGCGCGCCGTCAGGATCGCGGTGTGGCTGCTGGCGCTGGTGCCGTTCCT
GCGGCTGGTGGTGCTGGGCGCGACCGATCGGTACGGGGCGAATCCGCTGGAATTCGTCACGCGCTCCACCGGCACCTGGA
CGCTGGTGCTACTGTGCTGCACCCTGGCCGTCACGCCGCTGCGGCGGCTGACCGGCATGAACTGGCTGATCCGCATCCGC
CGCATGCTGGGGCTGTACACGTTCTTCTACGGCACGCTGCACTTCCTGATCTGGCTGCTGGTCGATCGCGGGCTCGATCC
GGCATCGATGGTGAAGGACATCGCCAAGCGGCCGTTCATCACCGTGGGCTTCGCGGCCTTCGTGCTGATGATCCCGCTGG
CGGCCACCTCCACCAACGCGATGGTGCGGCGCCTGGGCGGCAGGCGCTGGCAGTGGCTGCACCGGCTGGTCTATGTGACC
GGCGTGCTGGGCATCCTGCACTACTGGTGGCACAAGGCCGGCAAGCACGATTTCGCCGAGGTGTCGATCTATGCGGCGGT
GATGGCGGTGCTGCTGGGCCTGCGCGTGTGGTGGGTGTGGCGCGGGGCGCGGCAGGGGGCCATTGCCGGTGGGGCCGTGC
CGCTACGCGATTGA

Upstream 100 bases:

>100_bases
GCCCAAGCGCAAGACGCTGATGTTCAACGGCTACGACCAGGTCGCGTCGCTGTACACCGGCATGGATCTGCGCAAGTTCT
TCTGAGGACGCACCGTGAAG

Downstream 100 bases:

>100_bases
TGCGCCGAGGCAGGCCCAATGAAAAAGCCGCGACGTGCGCGGCTTTTTTTTGGGGGGGGGGGCGTCTTCAGGCCGACAGC
AGCTGCTCGCCGCGGATCAG

Product: sulfite oxidase subunit YedZ

Products: NA

Alternate protein names: Flavocytochrome yedZ

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MLPSMLPPKSLRAVRIAVWLLALVPFLRLVVLGATDRYGANPLEFVTRSTGTWTLVLLCCTLAVTPLRRLTGMNWLIRIR
RMLGLYTFFYGTLHFLIWLLVDRGLDPASMVKDIAKRPFITVGFAAFVLMIPLAATSTNAMVRRLGGRRWQWLHRLVYVT
GVLGILHYWWHKAGKHDFAEVSIYAAVMAVLLGLRVWWVWRGARQGAIAGGAVPLRD

Sequences:

>Translated_217_residues
MLPSMLPPKSLRAVRIAVWLLALVPFLRLVVLGATDRYGANPLEFVTRSTGTWTLVLLCCTLAVTPLRRLTGMNWLIRIR
RMLGLYTFFYGTLHFLIWLLVDRGLDPASMVKDIAKRPFITVGFAAFVLMIPLAATSTNAMVRRLGGRRWQWLHRLVYVT
GVLGILHYWWHKAGKHDFAEVSIYAAVMAVLLGLRVWWVWRGARQGAIAGGAVPLRD
>Mature_217_residues
MLPSMLPPKSLRAVRIAVWLLALVPFLRLVVLGATDRYGANPLEFVTRSTGTWTLVLLCCTLAVTPLRRLTGMNWLIRIR
RMLGLYTFFYGTLHFLIWLLVDRGLDPASMVKDIAKRPFITVGFAAFVLMIPLAATSTNAMVRRLGGRRWQWLHRLVYVT
GVLGILHYWWHKAGKHDFAEVSIYAAVMAVLLGLRVWWVWRGARQGAIAGGAVPLRD

Specific function: Is probably involved in the electron transfer between its heme and the molybdenum cofactor of the reductase catalytic subunit yedY

COG id: COG2717

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedZ family

Homologues:

Organism=Escherichia coli, GI1788283, Length=166, Percent_Identity=37.3493975903614, Blast_Score=103, Evalue=9e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YEDZ_RALSO (Q8XV51)

Other databases:

- EMBL:   AL646052
- RefSeq:   NP_521101.1
- GeneID:   1221834
- GenomeReviews:   AL646052_GR
- KEGG:   rso:RSc2980
- NMPDR:   fig|267608.1.peg.2980
- HOGENOM:   HBG751530
- OMA:   ILGLDWG
- ProtClustDB:   PRK05419
- BioCyc:   RSOL267608:RSC2980-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_01207
- InterPro:   IPR013130
- InterPro:   IPR022837

Pfam domain/function: PF01794 Ferric_reduct

EC number: NA

Molecular weight: Translated: 24553; Mature: 24553

Theoretical pI: Translated: 11.93; Mature: 11.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xf65aee8)-; HASH(0xf1b6744)-; HASH(0xf44b9ec)-; HASH(0xf78183c)-; HASH(0xee5ea54)-; HASH(0xf62a7a4)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPSMLPPKSLRAVRIAVWLLALVPFLRLVVLGATDRYGANPLEFVTRSTGTWTLVLLCC
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHH
TLAVTPLRRLTGMNWLIRIRRMLGLYTFFYGTLHFLIWLLVDRGLDPASMVKDIAKRPFI
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCH
TVGFAAFVLMIPLAATSTNAMVRRLGGRRWQWLHRLVYVTGVLGILHYWWHKAGKHDFAE
HHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VSIYAAVMAVLLGLRVWWVWRGARQGAIAGGAVPLRD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
>Mature Secondary Structure
MLPSMLPPKSLRAVRIAVWLLALVPFLRLVVLGATDRYGANPLEFVTRSTGTWTLVLLCC
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHH
TLAVTPLRRLTGMNWLIRIRRMLGLYTFFYGTLHFLIWLLVDRGLDPASMVKDIAKRPFI
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCH
TVGFAAFVLMIPLAATSTNAMVRRLGGRRWQWLHRLVYVTGVLGILHYWWHKAGKHDFAE
HHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VSIYAAVMAVLLGLRVWWVWRGARQGAIAGGAVPLRD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11823852