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The map label for this gene is 17547697

Identifier: 17547697

GI number: 17547697

Start: 3211444

End: 3211791

Strand: Direct

Name: 17547697

Synonym: RSc2978

Alternate gene names: NA

Gene position: 3211444-3211791 (Clockwise)

Preceding gene: 17547695

Following gene: 17547698

Centisome position: 86.41

GC content: 71.26

Gene sequence:

>348_bases
ATGCTACACTCCAAAATCTTGCGGGGGCTGGGCGCGCAAGCCTTTCCGGCTGACGGTCGCCGCGCCCCGAGTGACTCCGA
TCGCCGCATCGCGGCATCCTTTCTGCACCATCATCCGATGATACGAACCGCCGCCATTGTAGCCACTGTCGGCCTGGCCC
TGACGGTCACCGGTCTCTCCGGCTGCGGCATTCGCGGACCGCTGTACCTGCCCACCGTGCCGCCCGCCCCGACCGCGCCC
ACCACGCCGGACCCGGGCATCGCAGGCCCCAACGCCGTGCCGCAATTGCCGGTGCCGGGCACCAGGGCCGCGCCGGATGC
CGCCAGCGCAGTCCCGGCCAGCCGCTGA

Upstream 100 bases:

>100_bases
GTCGGCGTCAACCTCATCGGCGGCGCGCTCGACGGTGCGCTCGATACGGCCCAACTCGGCGTCGGCCAGCGCCAGGAACT
CCGATTCGGTCAGGGGGGGC

Downstream 100 bases:

>100_bases
TTCCGTTCTTCCGCTGTCTTTCTCAACCGGCGTCGCAGTGCGGCGCCCTGATGGTTTCCTGTTCATGTCCGAGTCCCTGA
TCCGCCAGGACGGCGCCCTG

Product: proline-rich transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MLHSKILRGLGAQAFPADGRRAPSDSDRRIAASFLHHHPMIRTAAIVATVGLALTVTGLSGCGIRGPLYLPTVPPAPTAP
TTPDPGIAGPNAVPQLPVPGTRAAPDAASAVPASR

Sequences:

>Translated_115_residues
MLHSKILRGLGAQAFPADGRRAPSDSDRRIAASFLHHHPMIRTAAIVATVGLALTVTGLSGCGIRGPLYLPTVPPAPTAP
TTPDPGIAGPNAVPQLPVPGTRAAPDAASAVPASR
>Mature_115_residues
MLHSKILRGLGAQAFPADGRRAPSDSDRRIAASFLHHHPMIRTAAIVATVGLALTVTGLSGCGIRGPLYLPTVPPAPTAP
TTPDPGIAGPNAVPQLPVPGTRAAPDAASAVPASR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11594; Mature: 11594

Theoretical pI: Translated: 11.66; Mature: 11.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHSKILRGLGAQAFPADGRRAPSDSDRRIAASFLHHHPMIRTAAIVATVGLALTVTGLS
CCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC
GCGIRGPLYLPTVPPAPTAPTTPDPGIAGPNAVPQLPVPGTRAAPDAASAVPASR
CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLHSKILRGLGAQAFPADGRRAPSDSDRRIAASFLHHHPMIRTAAIVATVGLALTVTGLS
CCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC
GCGIRGPLYLPTVPPAPTAPTTPDPGIAGPNAVPQLPVPGTRAAPDAASAVPASR
CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA