| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is mlaE [H]
Identifier: 17547680
GI number: 17547680
Start: 3188679
End: 3189446
Strand: Reverse
Name: mlaE [H]
Synonym: RSc2961
Alternate gene names: 17547680
Gene position: 3189446-3188679 (Counterclockwise)
Preceding gene: 17547681
Following gene: 17547679
Centisome position: 85.82
GC content: 66.67
Gene sequence:
>768_bases ATGATTTCGTCGATCGGCTTCCTGGTTCGCATCCTGATCAGCCGCCTCGGCTACGCGACACGCATGCTGTTGGCGCTGAT CGGCGCCGGCCGCGACGTGCTGCGCCGCCCGCGCCTGCTGGTCGAGCAGTTGCGTTTCATCGGCAACGACTCGTTCATCA TCATCGCGGTATCGGGCCTGTTCGTCGGCTTCGTGCTGGGCCTGCAGGGCTACTACACGCTCAACCGCTACGGCTCGGAG CAGGCGCTGGGCCTGCTGGTGGCGCTGTCGCTGGTGCGCGAGCTGGGGCCGGTGGTGACGGCGCTGCTGTTCGCCGGCCG CGCCGGCACTTCGCTGACCGCCGAGATCGGCCTGATGAAGGCCAACGAAGAGCTGATCGCCATGGAAATGATGGCGGTCG ATCCTCTTGCCCGCGTGCTGGCGCCGCGCTTCTGGGGCGGCTTCATCGCCATGCCGTTGCTGGCCGCCATCTTCAGCGCG GTGGGCATTCTGGGCGGATACTTCGTCGGCGTGGGCCTGATCGGCGTGGATGCCGGCGCATTCTGGTCGCAGATGCAGGC CGGCGTGGACGTGGTGAAAGACGTGCTCAACGGCGTCATCAAGAGCGTGGTGTTCGGCGTGGCGGTCACCTTCGTCGCGC TGTACCAGGGCTATGAGGCCAAGGCCACGCCCGAGGGCGTGTCGCGTGCGACCACCCGCACCGTGGTGATTGCGTCGCTG GCCGTGCTGGCGTTGGACTTCGTGCTGACCGCGCTGATGTTCAGTTGA
Upstream 100 bases:
>100_bases TCGTGCACGGCGAGCCCGACGGCCCCGTGCCGTTCCATTACCCGGGCGTGCCCCTGGCCGAAGACTTCGGCGTAGGTGGC CGGCGTGACGGGGAGGCGCA
Downstream 100 bases:
>100_bases AGCGGTCGGCATTCAGAGAGAAAAGATCATGCGTAAGAGCCTCCTCGATTTCTGGGTCGGACTGTTCGTGCTGGTGGGCC TCATCGCGCTGCTGTTCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MISSIGFLVRILISRLGYATRMLLALIGAGRDVLRRPRLLVEQLRFIGNDSFIIIAVSGLFVGFVLGLQGYYTLNRYGSE QALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKANEELIAMEMMAVDPLARVLAPRFWGGFIAMPLLAAIFSA VGILGGYFVGVGLIGVDAGAFWSQMQAGVDVVKDVLNGVIKSVVFGVAVTFVALYQGYEAKATPEGVSRATTRTVVIASL AVLALDFVLTALMFS
Sequences:
>Translated_255_residues MISSIGFLVRILISRLGYATRMLLALIGAGRDVLRRPRLLVEQLRFIGNDSFIIIAVSGLFVGFVLGLQGYYTLNRYGSE QALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKANEELIAMEMMAVDPLARVLAPRFWGGFIAMPLLAAIFSA VGILGGYFVGVGLIGVDAGAFWSQMQAGVDVVKDVLNGVIKSVVFGVAVTFVALYQGYEAKATPEGVSRATTRTVVIASL AVLALDFVLTALMFS >Mature_255_residues MISSIGFLVRILISRLGYATRMLLALIGAGRDVLRRPRLLVEQLRFIGNDSFIIIAVSGLFVGFVLGLQGYYTLNRYGSE QALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKANEELIAMEMMAVDPLARVLAPRFWGGFIAMPLLAAIFSA VGILGGYFVGVGLIGVDAGAFWSQMQAGVDVVKDVLNGVIKSVVFGVAVTFVALYQGYEAKATPEGVSRATTRTVVIASL AVLALDFVLTALMFS
Specific function: Part of the ABC transporter complex mlaFEDB that actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner memb
COG id: COG0767
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaE permease family [H]
Homologues:
Organism=Escherichia coli, GI1789585, Length=220, Percent_Identity=63.6363636363636, Blast_Score=272, Evalue=1e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003453 [H]
Pfam domain/function: PF02405 DUF140 [H]
EC number: NA
Molecular weight: Translated: 27039; Mature: 27039
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISSIGFLVRILISRLGYATRMLLALIGAGRDVLRRPRLLVEQLRFIGNDSFIIIAVSGL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHH FVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMK HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHC ANEELIAMEMMAVDPLARVLAPRFWGGFIAMPLLAAIFSAVGILGGYFVGVGLIGVDAGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH FWSQMQAGVDVVKDVLNGVIKSVVFGVAVTFVALYQGYEAKATPEGVSRATTRTVVIASL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH AVLALDFVLTALMFS HHHHHHHHHHHHHCC >Mature Secondary Structure MISSIGFLVRILISRLGYATRMLLALIGAGRDVLRRPRLLVEQLRFIGNDSFIIIAVSGL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHH FVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMK HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHC ANEELIAMEMMAVDPLARVLAPRFWGGFIAMPLLAAIFSAVGILGGYFVGVGLIGVDAGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH FWSQMQAGVDVVKDVLNGVIKSVVFGVAVTFVALYQGYEAKATPEGVSRATTRTVVIASL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH AVLALDFVLTALMFS HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]