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The map label for this gene is yjjK [C]

Identifier: 17547632

GI number: 17547632

Start: 3138992

End: 3140659

Strand: Reverse

Name: yjjK [C]

Synonym: RSc2913

Alternate gene names: 17547632

Gene position: 3140659-3138992 (Counterclockwise)

Preceding gene: 17547633

Following gene: 17547626

Centisome position: 84.51

GC content: 64.87

Gene sequence:

>1668_bases
ATGTCACAGTACGTTTTCACCATGAACCGCGTGGGCAAGATCGTTCCGCCCAAGCGCCAGATCCTCAAGGACATCTCGCT
GTCGTTCTTTCCCGGCGCCAAGATCGGCGTGCTCGGCCTGAACGGCTCGGGCAAGTCGACCGTGCTCAAGATCATGGCCG
GCCTCGACAAGGACATCGAGGGCGAAGCCACGCCGATGCCCAACCTGAACATCGGCTACCTGCCGCAGGAGCCGCAACTC
GATCCCGCCAAGACCGTGCGCGAGGAAGTCGAGAGCGGTCTGGGTGAGGTGATGGACGCACAGAAGCAGCTCGAAGCCGT
CTACGTCGCCTACGCCGAGCCGGATGCCGACTTCGACAAGCTGGCCGAAGAGCAGGCCCGCCTGGAAGCCATCATCGCCG
CCGGCGCCGGCGATAACGTCGAGCTGCAGCTCGAAATCGCCGCCGATGCCCTGCGCCTGCCGCCGTGGGACGCGCGCATC
GAGCACCTGTCGGGCGGCGAAAAGCGCCGCGTGGCGCTGTGCAAGCTGCTGCTGTCGCGCCCCGACATGCTGCTGCTCGA
CGAGCCGACCAACCACCTGGACGCGGAATCCGTCGAGTGGCTCGAGCAGTTCCTGACCCGCTTCCCGGGCACCGTGGTGG
CCGTGACCCACGACCGCTACTTCCTCGACAATGCCGCCGAGTGGATTCTCGAACTCGACCGCGGCCACGGCATTCCCTGG
AAGGGCAACTACAGCTCCTGGCTGGACCAGAAGGAAACCCGCCTGAAGCAGGAAGAGTCCACCGAATCGGCACGCCAGAA
GGCCCTGAAGAAGGAGCTGGAGTGGGTGCGCCAGAATCCGAAGGGCCGTCAGGCCAAATCCAAGGCCCGTCTGGCACGCT
TCGACGAGCTGAACAGCCAGGAATACCAGAAGCGCAACGAAACGCAGGAAATCTTCATCCCGGCCGGCGAGCGCCTGGGC
AATGAAGTCGTCGAGTTCACCAACGTCAGCAAGGGCTACGGCGACCGCCTGCTGATCGACAATCTCAGCTTCACCATCCC
GGCCGGCGCCATCGTCGGCATCATCGGGCCGAACGGCGCCGGCAAGTCGACGCTGTTCCGCATGCTGACGGGCAAGGAGC
AGCCGGATGCGGGCACCGTCAAGATTGGCCCGACCGTCAAGCTCGCCTATGTGGACCAGAGCCGCGATGCCCTGGACGGC
AGCAAGACCGTGTTCGAGGAGATCTCGGGCGGCGCCGACATTCTGACGGTGGGCCGGTACGAGACGCCGTCGCGCGCCTA
CATCGGCCGCTTCAACTTCAAGGGCGGCGACCAGCAGAAGCATGTCGGCACGCTGTCGGGCGGCGAGCGCGGCCGCCTGC
ACCTGGCCAAGACGCTGATCTCCGGCGGCAACGTGCTGCTGCTGGACGAACCGTCCAACGACCTCGACGTGGAAACGCTG
CGCGCGCTGGAAGACGCGCTGCTGGAATTCGCCGGCTGCGTGATGGTGATCTCGCACGACCGCTGGTTCCTGGACCGCAT
CGCCACGCACATCATCGCCTTCGAAGGCGACTCGCACGTCGAATTCTTCCCGGGCAACTACCAGGAATACGAAGCGGACA
AGAAGAAGCGCTTGGGCGAGGAAGGTGCCAAGCCCAAGCGCATCCGCTACAAGCCCGTCATCCGCTAA

Upstream 100 bases:

>100_bases
GGGCGCCTTTTTCTTTGGCCGCGCGCCGCCCGATCCGGTGCGGCCTGCCGCCCGCCTTTGCTACACTCCGCGGGTTTCCA
AAATTCCAGCGCCTGACCTC

Downstream 100 bases:

>100_bases
GCCGGAGGCTCAGGCGCCGCGGGCGCGTCGAGATTGCTGTCGAACTCGACGCGCTTGTGCGAGCCGTCGCAGAACGGCTT
GTTCAGCGAATGGCCGCAGC

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 555; Mature: 554

Protein sequence:

>555_residues
MSQYVFTMNRVGKIVPPKRQILKDISLSFFPGAKIGVLGLNGSGKSTVLKIMAGLDKDIEGEATPMPNLNIGYLPQEPQL
DPAKTVREEVESGLGEVMDAQKQLEAVYVAYAEPDADFDKLAEEQARLEAIIAAGAGDNVELQLEIAADALRLPPWDARI
EHLSGGEKRRVALCKLLLSRPDMLLLDEPTNHLDAESVEWLEQFLTRFPGTVVAVTHDRYFLDNAAEWILELDRGHGIPW
KGNYSSWLDQKETRLKQEESTESARQKALKKELEWVRQNPKGRQAKSKARLARFDELNSQEYQKRNETQEIFIPAGERLG
NEVVEFTNVSKGYGDRLLIDNLSFTIPAGAIVGIIGPNGAGKSTLFRMLTGKEQPDAGTVKIGPTVKLAYVDQSRDALDG
SKTVFEEISGGADILTVGRYETPSRAYIGRFNFKGGDQQKHVGTLSGGERGRLHLAKTLISGGNVLLLDEPSNDLDVETL
RALEDALLEFAGCVMVISHDRWFLDRIATHIIAFEGDSHVEFFPGNYQEYEADKKKRLGEEGAKPKRIRYKPVIR

Sequences:

>Translated_555_residues
MSQYVFTMNRVGKIVPPKRQILKDISLSFFPGAKIGVLGLNGSGKSTVLKIMAGLDKDIEGEATPMPNLNIGYLPQEPQL
DPAKTVREEVESGLGEVMDAQKQLEAVYVAYAEPDADFDKLAEEQARLEAIIAAGAGDNVELQLEIAADALRLPPWDARI
EHLSGGEKRRVALCKLLLSRPDMLLLDEPTNHLDAESVEWLEQFLTRFPGTVVAVTHDRYFLDNAAEWILELDRGHGIPW
KGNYSSWLDQKETRLKQEESTESARQKALKKELEWVRQNPKGRQAKSKARLARFDELNSQEYQKRNETQEIFIPAGERLG
NEVVEFTNVSKGYGDRLLIDNLSFTIPAGAIVGIIGPNGAGKSTLFRMLTGKEQPDAGTVKIGPTVKLAYVDQSRDALDG
SKTVFEEISGGADILTVGRYETPSRAYIGRFNFKGGDQQKHVGTLSGGERGRLHLAKTLISGGNVLLLDEPSNDLDVETL
RALEDALLEFAGCVMVISHDRWFLDRIATHIIAFEGDSHVEFFPGNYQEYEADKKKRLGEEGAKPKRIRYKPVIR
>Mature_554_residues
SQYVFTMNRVGKIVPPKRQILKDISLSFFPGAKIGVLGLNGSGKSTVLKIMAGLDKDIEGEATPMPNLNIGYLPQEPQLD
PAKTVREEVESGLGEVMDAQKQLEAVYVAYAEPDADFDKLAEEQARLEAIIAAGAGDNVELQLEIAADALRLPPWDARIE
HLSGGEKRRVALCKLLLSRPDMLLLDEPTNHLDAESVEWLEQFLTRFPGTVVAVTHDRYFLDNAAEWILELDRGHGIPWK
GNYSSWLDQKETRLKQEESTESARQKALKKELEWVRQNPKGRQAKSKARLARFDELNSQEYQKRNETQEIFIPAGERLGN
EVVEFTNVSKGYGDRLLIDNLSFTIPAGAIVGIIGPNGAGKSTLFRMLTGKEQPDAGTVKIGPTVKLAYVDQSRDALDGS
KTVFEEISGGADILTVGRYETPSRAYIGRFNFKGGDQQKHVGTLSGGERGRLHLAKTLISGGNVLLLDEPSNDLDVETLR
ALEDALLEFAGCVMVISHDRWFLDRIATHIIAFEGDSHVEFFPGNYQEYEADKKKRLGEEGAKPKRIRYKPVIR

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=528, Percent_Identity=28.5984848484849, Blast_Score=189, Evalue=4e-48,
Organism=Homo sapiens, GI10947137, Length=546, Percent_Identity=30.2197802197802, Blast_Score=189, Evalue=5e-48,
Organism=Homo sapiens, GI27881506, Length=549, Percent_Identity=30.6010928961749, Blast_Score=189, Evalue=6e-48,
Organism=Homo sapiens, GI10947135, Length=559, Percent_Identity=27.906976744186, Blast_Score=160, Evalue=4e-39,
Organism=Homo sapiens, GI69354671, Length=559, Percent_Identity=27.906976744186, Blast_Score=160, Evalue=4e-39,
Organism=Homo sapiens, GI30795238, Length=176, Percent_Identity=31.8181818181818, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI27881501, Length=176, Percent_Identity=31.8181818181818, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI31657092, Length=203, Percent_Identity=30.5418719211823, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI171184400, Length=202, Percent_Identity=30.1980198019802, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI45446740, Length=198, Percent_Identity=28.2828282828283, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI47078218, Length=198, Percent_Identity=28.2828282828283, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI21536376, Length=227, Percent_Identity=27.3127753303965, Blast_Score=67, Evalue=5e-11,
Organism=Escherichia coli, GI2367384, Length=555, Percent_Identity=71.8918918918919, Blast_Score=840, Evalue=0.0,
Organism=Escherichia coli, GI1787182, Length=516, Percent_Identity=33.3333333333333, Blast_Score=261, Evalue=7e-71,
Organism=Escherichia coli, GI1789751, Length=542, Percent_Identity=31.3653136531365, Blast_Score=241, Evalue=9e-65,
Organism=Escherichia coli, GI1787041, Length=521, Percent_Identity=31.4779270633397, Blast_Score=241, Evalue=1e-64,
Organism=Escherichia coli, GI87081782, Length=574, Percent_Identity=24.390243902439, Blast_Score=105, Evalue=9e-24,
Organism=Escherichia coli, GI87081709, Length=192, Percent_Identity=32.2916666666667, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI1788761, Length=211, Percent_Identity=28.436018957346, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1788165, Length=190, Percent_Identity=32.1052631578947, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI48994943, Length=330, Percent_Identity=25.4545454545455, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI87081791, Length=195, Percent_Identity=34.8717948717949, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI1786975, Length=386, Percent_Identity=24.8704663212435, Blast_Score=79, Evalue=1e-15,
Organism=Escherichia coli, GI1787164, Length=187, Percent_Identity=31.5508021390374, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1786345, Length=218, Percent_Identity=30.7339449541284, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI1788897, Length=204, Percent_Identity=29.9019607843137, Blast_Score=74, Evalue=4e-14,
Organism=Escherichia coli, GI1786398, Length=208, Percent_Identity=27.8846153846154, Blast_Score=73, Evalue=6e-14,
Organism=Escherichia coli, GI1787712, Length=164, Percent_Identity=31.0975609756098, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1788225, Length=223, Percent_Identity=25.5605381165919, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1788450, Length=209, Percent_Identity=25.8373205741627, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1789891, Length=236, Percent_Identity=24.1525423728814, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786563, Length=190, Percent_Identity=24.2105263157895, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1790739, Length=170, Percent_Identity=30.5882352941176, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1790525, Length=220, Percent_Identity=24.0909090909091, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1788053, Length=168, Percent_Identity=32.1428571428571, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1787089, Length=244, Percent_Identity=27.0491803278689, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1790467, Length=227, Percent_Identity=26.431718061674, Blast_Score=63, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=547, Percent_Identity=27.2394881170018, Blast_Score=196, Evalue=4e-50,
Organism=Caenorhabditis elegans, GI17553372, Length=535, Percent_Identity=29.1588785046729, Blast_Score=186, Evalue=3e-47,
Organism=Caenorhabditis elegans, GI17555318, Length=569, Percent_Identity=28.2952548330404, Blast_Score=174, Evalue=1e-43,
Organism=Caenorhabditis elegans, GI193208177, Length=262, Percent_Identity=29.0076335877863, Blast_Score=82, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI17569143, Length=233, Percent_Identity=27.4678111587983, Blast_Score=69, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI115534520, Length=199, Percent_Identity=30.1507537688442, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=532, Percent_Identity=31.390977443609, Blast_Score=205, Evalue=2e-53,
Organism=Saccharomyces cerevisiae, GI6321121, Length=541, Percent_Identity=25.6931608133087, Blast_Score=186, Evalue=8e-48,
Organism=Saccharomyces cerevisiae, GI6323278, Length=378, Percent_Identity=24.8677248677249, Blast_Score=111, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6324314, Length=381, Percent_Identity=25.1968503937008, Blast_Score=107, Evalue=4e-24,
Organism=Saccharomyces cerevisiae, GI6325030, Length=381, Percent_Identity=27.0341207349081, Blast_Score=107, Evalue=6e-24,
Organism=Saccharomyces cerevisiae, GI6320266, Length=381, Percent_Identity=23.6220472440945, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24642252, Length=549, Percent_Identity=28.7795992714025, Blast_Score=191, Evalue=1e-48,
Organism=Drosophila melanogaster, GI18859989, Length=549, Percent_Identity=28.7795992714025, Blast_Score=191, Evalue=1e-48,
Organism=Drosophila melanogaster, GI24666836, Length=529, Percent_Identity=27.7882797731569, Blast_Score=182, Evalue=5e-46,
Organism=Drosophila melanogaster, GI24641342, Length=553, Percent_Identity=28.3905967450271, Blast_Score=182, Evalue=7e-46,
Organism=Drosophila melanogaster, GI21357907, Length=197, Percent_Identity=30.9644670050761, Blast_Score=83, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24666092, Length=189, Percent_Identity=29.6296296296296, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24648279, Length=187, Percent_Identity=30.4812834224599, Blast_Score=67, Evalue=5e-11,
Organism=Drosophila melanogaster, GI161078426, Length=187, Percent_Identity=30.4812834224599, Blast_Score=66, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022374
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 61714; Mature: 61583

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQYVFTMNRVGKIVPPKRQILKDISLSFFPGAKIGVLGLNGSGKSTVLKIMAGLDKDIE
CCCEEEEHHHCCCCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCC
GEATPMPNLNIGYLPQEPQLDPAKTVREEVESGLGEVMDAQKQLEAVYVAYAEPDADFDK
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHH
LAEEQARLEAIIAAGAGDNVELQLEIAADALRLPPWDARIEHLSGGEKRRVALCKLLLSR
HHHHHHHHHEEEEECCCCCEEEEEEEECCHHCCCCCHHHHHHCCCCCHHHHHHHHHHHCC
PDMLLLDEPTNHLDAESVEWLEQFLTRFPGTVVAVTHDRYFLDNAAEWILELDRGHGIPW
CCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCC
KGNYSSWLDQKETRLKQEESTESARQKALKKELEWVRQNPKGRQAKSKARLARFDELNSQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHH
EYQKRNETQEIFIPAGERLGNEVVEFTNVSKGYGDRLLIDNLSFTIPAGAIVGIIGPNGA
HHHHCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCEEEEECCCEEECCCEEEEEECCCCC
GKSTLFRMLTGKEQPDAGTVKIGPTVKLAYVDQSRDALDGSKTVFEEISGGADILTVGRY
CHHHHHHHHCCCCCCCCCEEEECCEEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEECCC
ETPSRAYIGRFNFKGGDQQKHVGTLSGGERGRLHLAKTLISGGNVLLLDEPSNDLDVETL
CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHH
RALEDALLEFAGCVMVISHDRWFLDRIATHIIAFEGDSHVEFFPGNYQEYEADKKKRLGE
HHHHHHHHHHCCEEEEEECCHHHHHHHHHHEEEECCCCCEEECCCCCHHHHHHHHHHHHH
EGAKPKRIRYKPVIR
CCCCCCEECCCCCCC
>Mature Secondary Structure 
SQYVFTMNRVGKIVPPKRQILKDISLSFFPGAKIGVLGLNGSGKSTVLKIMAGLDKDIE
CCEEEEHHHCCCCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCC
GEATPMPNLNIGYLPQEPQLDPAKTVREEVESGLGEVMDAQKQLEAVYVAYAEPDADFDK
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHH
LAEEQARLEAIIAAGAGDNVELQLEIAADALRLPPWDARIEHLSGGEKRRVALCKLLLSR
HHHHHHHHHEEEEECCCCCEEEEEEEECCHHCCCCCHHHHHHCCCCCHHHHHHHHHHHCC
PDMLLLDEPTNHLDAESVEWLEQFLTRFPGTVVAVTHDRYFLDNAAEWILELDRGHGIPW
CCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCC
KGNYSSWLDQKETRLKQEESTESARQKALKKELEWVRQNPKGRQAKSKARLARFDELNSQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHH
EYQKRNETQEIFIPAGERLGNEVVEFTNVSKGYGDRLLIDNLSFTIPAGAIVGIIGPNGA
HHHHCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCEEEEECCCEEECCCEEEEEECCCCC
GKSTLFRMLTGKEQPDAGTVKIGPTVKLAYVDQSRDALDGSKTVFEEISGGADILTVGRY
CHHHHHHHHCCCCCCCCCEEEECCEEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEECCC
ETPSRAYIGRFNFKGGDQQKHVGTLSGGERGRLHLAKTLISGGNVLLLDEPSNDLDVETL
CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHH
RALEDALLEFAGCVMVISHDRWFLDRIATHIIAFEGDSHVEFFPGNYQEYEADKKKRLGE
HHHHHHHHHHCCEEEEEECCHHHHHHHHHHEEEECCCCCEEECCCCCHHHHHHHHHHHHH
EGAKPKRIRYKPVIR
CCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]