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The map label for this gene is ydhD [C]

Identifier: 17547623

GI number: 17547623

Start: 3131144

End: 3131455

Strand: Direct

Name: ydhD [C]

Synonym: RSc2904

Alternate gene names: 17547623

Gene position: 3131144-3131455 (Clockwise)

Preceding gene: 17547622

Following gene: 17547624

Centisome position: 84.25

GC content: 61.86

Gene sequence:

>312_bases
ATGAGCACCACGCACGAAAAGATCGACCAGATCGTCAAGAGCCACCCTGTCGTCCTCTTCATGAAGGGCACGGCGCAGTT
CCCGATGTGCGGCTTCTCCGGCCGCGCCGTCCAGATCCTGAAGGCCTGCGGCGTGGACCAGCCCTACACCGTCAACGTGC
TGGAAGACGACGAAATCCGCCAGGGCATCAAGGAATACGCCAACTGGCCGACCATCCCGCAGCTCTACGTCAAGGGTGAG
TTCATCGGCGGCTCGGACATCATGATGGAGATGTACCAGAGCGGCGAACTGCAGCCGCTGCTGGCCGCCTGA

Upstream 100 bases:

>100_bases
ACCCGGCCGCGCAGAACGCGGCCTGACGAACCTCGCTAGAATAGGCGGGTTTTCCATGCGGCCCGGGCCTGCCCGTGCCC
TCAACGAATCGAGCCTCCCC

Downstream 100 bases:

>100_bases
ACGCCGCCCCGGTTTCTGCGTGACTTCGTCCCTGGACGCCGGCTCCGGTCCGGCGGCATCCGCCCAGCCGGCCACGGCCG
GCGCACGGCGCGCGCGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MSTTHEKIDQIVKSHPVVLFMKGTAQFPMCGFSGRAVQILKACGVDQPYTVNVLEDDEIRQGIKEYANWPTIPQLYVKGE
FIGGSDIMMEMYQSGELQPLLAA

Sequences:

>Translated_103_residues
MSTTHEKIDQIVKSHPVVLFMKGTAQFPMCGFSGRAVQILKACGVDQPYTVNVLEDDEIRQGIKEYANWPTIPQLYVKGE
FIGGSDIMMEMYQSGELQPLLAA
>Mature_102_residues
STTHEKIDQIVKSHPVVLFMKGTAQFPMCGFSGRAVQILKACGVDQPYTVNVLEDDEIRQGIKEYANWPTIPQLYVKGEF
IGGSDIMMEMYQSGELQPLLAA

Specific function: Unknown

COG id: COG0278

COG function: function code O; Glutaredoxin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42516576, Length=92, Percent_Identity=55.4347826086957, Blast_Score=117, Evalue=2e-27,
Organism=Homo sapiens, GI95113651, Length=96, Percent_Identity=50, Blast_Score=105, Evalue=8e-24,
Organism=Escherichia coli, GI1787943, Length=101, Percent_Identity=53.4653465346535, Blast_Score=117, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17556042, Length=99, Percent_Identity=50.5050505050505, Blast_Score=101, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI71988153, Length=88, Percent_Identity=43.1818181818182, Blast_Score=91, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI71988159, Length=88, Percent_Identity=40.9090909090909, Blast_Score=82, Evalue=5e-17,
Organism=Saccharomyces cerevisiae, GI6325198, Length=99, Percent_Identity=54.5454545454545, Blast_Score=111, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6320303, Length=84, Percent_Identity=44.047619047619, Blast_Score=83, Evalue=8e-18,
Organism=Saccharomyces cerevisiae, GI6321022, Length=86, Percent_Identity=41.8604651162791, Blast_Score=82, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24642023, Length=90, Percent_Identity=50, Blast_Score=107, Evalue=1e-24,
Organism=Drosophila melanogaster, GI19921242, Length=100, Percent_Identity=43, Blast_Score=96, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 11481; Mature: 11350

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTHEKIDQIVKSHPVVLFMKGTAQFPMCGFSGRAVQILKACGVDQPYTVNVLEDDEIR
CCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCHHHH
QGIKEYANWPTIPQLYVKGEFIGGSDIMMEMYQSGELQPLLAA
HHHHHHCCCCCCCEEEEEEEEECCHHHHHHHHHCCCCCEECCC
>Mature Secondary Structure 
STTHEKIDQIVKSHPVVLFMKGTAQFPMCGFSGRAVQILKACGVDQPYTVNVLEDDEIR
CCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCHHHH
QGIKEYANWPTIPQLYVKGEFIGGSDIMMEMYQSGELQPLLAA
HHHHHHCCCCCCCEEEEEEEEECCHHHHHHHHHCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]