| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is hipO [H]
Identifier: 17547590
GI number: 17547590
Start: 3094267
End: 3095457
Strand: Direct
Name: hipO [H]
Synonym: RSc2871
Alternate gene names: 17547590
Gene position: 3094267-3095457 (Clockwise)
Preceding gene: 17547583
Following gene: 17547592
Centisome position: 83.26
GC content: 63.06
Gene sequence:
>1191_bases ATGAAGCTGATCCCAGAAATCCTCGCCGCCCAGGCAGAGATCCAGGCACTGCGACGTGACATTCATGCCCACCCCGAACT CTGTTTCGAAGAGCAGCGCACCTCCGACCTGGTCGCCGCCAAGCTGGCCGAATGGGGTATCGAAGTGCACCGTGGACTCG GCAAGACCGGCCTGGTCGGCGTGATCCGCAACGGTGAAGGCCAACGGATCGGCCTGCGCGCAGACATGGATGCGCTGCCA TTGGCCGAGGCCAACCAGTTCACACACCGCTCCAGGCACGAAGGAAAAATGCACGCATGCGGCCATGACGGCCACACGGC CATGCTGCTGGGTGCGGCCCACTATCTCGCCAGGCACCGCAACTTCAGCGGTACGGTCCACCTGATCTTCCAGCCGGCCG AAGAAGGCGGCGGCGGCGCTCGGGAAATGATCAGGGACGGCCTGTTCGACCGCTTCCCGTGCGACGCGGTGTTCGGCATG CATAACTGGCCGGGCGTACCCGTCGGCGCATTCGGCACGCGCGTCGGCCCGCTGATGGCATCCAGCAACGAATTCCGCAT CGTCATCAAAGGCAAGGGCGCACACGCCGCACTGCCGCACAACGGCAACGACCCCGTGTTCGTTGGCGCACAGATGGTAT CGGCGCTGCAGGGCGTCATCACTCGCAACAAGCGGCCGATCGACACGGCGGTGCTGTCCATCACGCAGTTCCATGCCGGC GACGCCAGCAACATCATCCCGAACGAAGCGTGGATCGGCGGCACCGTGCGCACCTTCTCGACAGCCGTGCTGGACCTGAT CGAGCGGCGCATGGAAGAAGTCGCCAAAGCGATCGCCGCCGCCTACGACTGCTCCATCGACTTCACCTTCCATCGCAACT ACCCGCCCACCGTCAACACCGAGCGGGAAACGCTGTTCGCCGCCGAAGTCATGCGCGAACTGGTCGGCCCCGATCACGTC GATGCCAATATCGACCCGACCATGGGAGCCGAGGATTTCTCCTTCATGCTGATCGAGAAACCGGGCTGCTTTGCCTTCAT CGGCAACGGCGACGGCGATCATCGAGAACAAGGCCACGGCCTGGGACCGTGCATGCTGCACAATCCCAGCTACGACTTCA ACGACGAACTGCTGCCGCTCGGCGCAACTTACTGGGTTCGCCTGGTAGAAAAATTTTTGGCTCCAGCTTGA
Upstream 100 bases:
>100_bases GGCGTGCCGCGCTCGCACGGATGGCGCGGACCAGGCAGCCACCTTCGGCGTATCATCGGACGTTGAAGCGAACTTCCACG CCAGAACACGAGCGCCACCC
Downstream 100 bases:
>100_bases TTCACGCATCTCCTCAGAAACACAAAAACCACCGTGCACGGTGGGTTTTTTATGATCCGCAGAAAAGTTGCTCGCCGCAG TTGGGGACGCGTATCCGCGA
Product: hippurate hydrolase
Products: NA
Alternate protein names: Benzoylglycine amidohydrolase; Hippuricase [H]
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MKLIPEILAAQAEIQALRRDIHAHPELCFEEQRTSDLVAAKLAEWGIEVHRGLGKTGLVGVIRNGEGQRIGLRADMDALP LAEANQFTHRSRHEGKMHACGHDGHTAMLLGAAHYLARHRNFSGTVHLIFQPAEEGGGGAREMIRDGLFDRFPCDAVFGM HNWPGVPVGAFGTRVGPLMASSNEFRIVIKGKGAHAALPHNGNDPVFVGAQMVSALQGVITRNKRPIDTAVLSITQFHAG DASNIIPNEAWIGGTVRTFSTAVLDLIERRMEEVAKAIAAAYDCSIDFTFHRNYPPTVNTERETLFAAEVMRELVGPDHV DANIDPTMGAEDFSFMLIEKPGCFAFIGNGDGDHREQGHGLGPCMLHNPSYDFNDELLPLGATYWVRLVEKFLAPA
Sequences:
>Translated_396_residues MKLIPEILAAQAEIQALRRDIHAHPELCFEEQRTSDLVAAKLAEWGIEVHRGLGKTGLVGVIRNGEGQRIGLRADMDALP LAEANQFTHRSRHEGKMHACGHDGHTAMLLGAAHYLARHRNFSGTVHLIFQPAEEGGGGAREMIRDGLFDRFPCDAVFGM HNWPGVPVGAFGTRVGPLMASSNEFRIVIKGKGAHAALPHNGNDPVFVGAQMVSALQGVITRNKRPIDTAVLSITQFHAG DASNIIPNEAWIGGTVRTFSTAVLDLIERRMEEVAKAIAAAYDCSIDFTFHRNYPPTVNTERETLFAAEVMRELVGPDHV DANIDPTMGAEDFSFMLIEKPGCFAFIGNGDGDHREQGHGLGPCMLHNPSYDFNDELLPLGATYWVRLVEKFLAPA >Mature_396_residues MKLIPEILAAQAEIQALRRDIHAHPELCFEEQRTSDLVAAKLAEWGIEVHRGLGKTGLVGVIRNGEGQRIGLRADMDALP LAEANQFTHRSRHEGKMHACGHDGHTAMLLGAAHYLARHRNFSGTVHLIFQPAEEGGGGAREMIRDGLFDRFPCDAVFGM HNWPGVPVGAFGTRVGPLMASSNEFRIVIKGKGAHAALPHNGNDPVFVGAQMVSALQGVITRNKRPIDTAVLSITQFHAG DASNIIPNEAWIGGTVRTFSTAVLDLIERRMEEVAKAIAAAYDCSIDFTFHRNYPPTVNTERETLFAAEVMRELVGPDHV DANIDPTMGAEDFSFMLIEKPGCFAFIGNGDGDHREQGHGLGPCMLHNPSYDFNDELLPLGATYWVRLVEKFLAPA
Specific function: Required But Not Essential For Aminobenzoyl-Glutamate Utilization. May Participate In Hydrolysis Of Aminobenzoyl- Glutamate To Aminobenzoate, Either Alone Or In Combination With Abgb. [C]
COG id: COG1473
COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20 family [H]
Homologues:
Organism=Escherichia coli, GI87081880, Length=427, Percent_Identity=25.5269320843091, Blast_Score=99, Evalue=4e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017439 - InterPro: IPR010168 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: =3.5.1.32 [H]
Molecular weight: Translated: 43250; Mature: 43250
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLIPEILAAQAEIQALRRDIHAHPELCFEEQRTSDLVAAKLAEWGIEVHRGLGKTGLVG CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE VIRNGEGQRIGLRADMDALPLAEANQFTHRSRHEGKMHACGHDGHTAMLLGAAHYLARHR EEECCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHC NFSGTVHLIFQPAEEGGGGAREMIRDGLFDRFPCDAVFGMHNWPGVPVGAFGTRVGPLMA CCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHCCCCCCEE SSNEFRIVIKGKGAHAALPHNGNDPVFVGAQMVSALQGVITRNKRPIDTAVLSITQFHAG CCCCEEEEEEECCCEEECCCCCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC DASNIIPNEAWIGGTVRTFSTAVLDLIERRMEEVAKAIAAAYDCSIDFTFHRNYPPTVNT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCC ERETLFAAEVMRELVGPDHVDANIDPTMGAEDFSFMLIEKPGCFAFIGNGDGDHREQGHG CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCHHCCCC LGPCMLHNPSYDFNDELLPLGATYWVRLVEKFLAPA CCCEEEECCCCCCCCCEEECHHHHHHHHHHHHHCCC >Mature Secondary Structure MKLIPEILAAQAEIQALRRDIHAHPELCFEEQRTSDLVAAKLAEWGIEVHRGLGKTGLVG CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE VIRNGEGQRIGLRADMDALPLAEANQFTHRSRHEGKMHACGHDGHTAMLLGAAHYLARHR EEECCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHC NFSGTVHLIFQPAEEGGGGAREMIRDGLFDRFPCDAVFGMHNWPGVPVGAFGTRVGPLMA CCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHCCCCCCEE SSNEFRIVIKGKGAHAALPHNGNDPVFVGAQMVSALQGVITRNKRPIDTAVLSITQFHAG CCCCEEEEEEECCCEEECCCCCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC DASNIIPNEAWIGGTVRTFSTAVLDLIERRMEEVAKAIAAAYDCSIDFTFHRNYPPTVNT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCC ERETLFAAEVMRELVGPDHVDANIDPTMGAEDFSFMLIEKPGCFAFIGNGDGDHREQGHG CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCHHCCCC LGPCMLHNPSYDFNDELLPLGATYWVRLVEKFLAPA CCCEEEECCCCCCCCCEEECHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7730270; 10688204 [H]