| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is mtgA
Identifier: 17547495
GI number: 17547495
Start: 2986968
End: 2987672
Strand: Reverse
Name: mtgA
Synonym: RSc2776
Alternate gene names: 17547495
Gene position: 2987672-2986968 (Counterclockwise)
Preceding gene: 17547496
Following gene: 17547494
Centisome position: 80.39
GC content: 65.25
Gene sequence:
>705_bases ATGATGCGCTGGCTCGGCTACGTGATCGGCTGCTTTGCGGCGGGCGTGGTCGCGCTCAACCTGTATTTCTTCGCCGCCAT CGCCAGTTGGCAGGTCTTCAATCCCGCCTCGTCGGCGTTCATGCGGGCCGAGCGGATGCGGCTGTGCGGTGCCAATCTCG TCACCTGCGGGATCGACCATCGCTGGGTGCCGTACGACCAGATCTCGCGCAACCTCAAGCGCGCCGTCATCGCCAGCGAG GACGCCGATTTCGTCTCGCATTCCGGCTGGGAAGTCGACGCCATGCTCGACGCCTGGGAAAAGAACAAGCGGCGCGGCCA CGTGGTGGCGGGCGGCTCGACCATCACGCAGCAGCTGGCCAAGAACCTGTTCCTCTCCGGCGAGCGCCACTACCTGCGCA AGGGCGAGGAGCTCGTTATCACGTGGATGCTGGAGTTCTGGCTCGACAAGGAGCGCATCCTGGAGATCTACTTGAATTCG GTGGAGTGGGGCGAGGGCGTCTTCGGCGCCGAGGCGGCGGCGCAGCATTACTTCAAACGGCCGGCATCGCAATTGACGGT GGGCCAGGCCGCGCGACTGGCCGCGGCGCTGCCGGCGCCCAAGTGCTTCGACAAGAAGCGCTACTGCGCCAATGTTCACA TCAGTTTCACGCGCAAGGCGACGGTCATCGCCAACCGGATGGGCTCGGCGACCCTGCCGGACTGA
Upstream 100 bases:
>100_bases CGACACCGCCCCCGTGCTACAAGCCATGCGCGAGGGGCTGCAGGGCGAGGCGGCCGTGGCCGCGCGCGCGCATCAGCGCT GAGCGCCCGCAGCCCGCACC
Downstream 100 bases:
>100_bases CCCGGCTCAGGCACGCGGGGGCTTCGTAAACCTGCACTCAGTTGCGGTTTCGGAGCGAGGTTGAAGGGGCCTGAAAGGTA CAACTGTCCAACGCGCCTCA
Product: monofunctional biosynthetic peptidoglycan transglycosylase
Products: NA
Alternate protein names: Monofunctional TGase
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MMRWLGYVIGCFAAGVVALNLYFFAAIASWQVFNPASSAFMRAERMRLCGANLVTCGIDHRWVPYDQISRNLKRAVIASE DADFVSHSGWEVDAMLDAWEKNKRRGHVVAGGSTITQQLAKNLFLSGERHYLRKGEELVITWMLEFWLDKERILEIYLNS VEWGEGVFGAEAAAQHYFKRPASQLTVGQAARLAAALPAPKCFDKKRYCANVHISFTRKATVIANRMGSATLPD
Sequences:
>Translated_234_residues MMRWLGYVIGCFAAGVVALNLYFFAAIASWQVFNPASSAFMRAERMRLCGANLVTCGIDHRWVPYDQISRNLKRAVIASE DADFVSHSGWEVDAMLDAWEKNKRRGHVVAGGSTITQQLAKNLFLSGERHYLRKGEELVITWMLEFWLDKERILEIYLNS VEWGEGVFGAEAAAQHYFKRPASQLTVGQAARLAAALPAPKCFDKKRYCANVHISFTRKATVIANRMGSATLPD >Mature_234_residues MMRWLGYVIGCFAAGVVALNLYFFAAIASWQVFNPASSAFMRAERMRLCGANLVTCGIDHRWVPYDQISRNLKRAVIASE DADFVSHSGWEVDAMLDAWEKNKRRGHVVAGGSTITQQLAKNLFLSGERHYLRKGEELVITWMLEFWLDKERILEIYLNS VEWGEGVFGAEAAAQHYFKRPASQLTVGQAARLAAALPAPKCFDKKRYCANVHISFTRKATVIANRMGSATLPD
Specific function: Cell wall formation
COG id: COG0744
COG function: function code M; Membrane carboxypeptidase (penicillin-binding protein)
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 51 family
Homologues:
Organism=Escherichia coli, GI1789601, Length=142, Percent_Identity=50.7042253521127, Blast_Score=128, Evalue=3e-31, Organism=Escherichia coli, GI87082258, Length=148, Percent_Identity=39.8648648648649, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1786343, Length=167, Percent_Identity=32.9341317365269, Blast_Score=87, Evalue=8e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MTGA_RALSO (Q8XVQ4)
Other databases:
- EMBL: AL646052 - RefSeq: NP_520897.1 - ProteinModelPortal: Q8XVQ4 - SMR: Q8XVQ4 - GeneID: 1221623 - GenomeReviews: AL646052_GR - KEGG: rso:RSc2776 - NMPDR: fig|267608.1.peg.2776 - HOGENOM: HBG685698 - OMA: RISIHLK - ProtClustDB: PRK00056 - BioCyc: RSOL267608:RSC2776-MONOMER - HAMAP: MF_00766 - InterPro: IPR001264 - InterPro: IPR011812 - TIGRFAMs: TIGR02070
Pfam domain/function: PF00912 Transgly
EC number: 2.4.2.- [C]
Molecular weight: Translated: 26281; Mature: 26281
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xf0488a0)-;
Cys/Met content:
2.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRWLGYVIGCFAAGVVALNLYFFAAIASWQVFNPASSAFMRAERMRLCGANLVTCGIDH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHCCCEEEECCCC RWVPYDQISRNLKRAVIASEDADFVSHSGWEVDAMLDAWEKNKRRGHVVAGGSTITQQLA CCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHH KNLFLSGERHYLRKGEELVITWMLEFWLDKERILEIYLNSVEWGEGVFGAEAAAQHYFKR HHHHCCCCHHHHHCCCCEEHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHC PASQLTVGQAARLAAALPAPKCFDKKRYCANVHISFTRKATVIANRMGSATLPD CHHHHHHHHHHHHHHHCCCCHHHCCCHHEEEEEEEECCHHHHHHHHCCCCCCCH >Mature Secondary Structure MMRWLGYVIGCFAAGVVALNLYFFAAIASWQVFNPASSAFMRAERMRLCGANLVTCGIDH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHCCCEEEECCCC RWVPYDQISRNLKRAVIASEDADFVSHSGWEVDAMLDAWEKNKRRGHVVAGGSTITQQLA CCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHH KNLFLSGERHYLRKGEELVITWMLEFWLDKERILEIYLNSVEWGEGVFGAEAAAQHYFKR HHHHCCCCHHHHHCCCCEEHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHC PASQLTVGQAARLAAALPAPKCFDKKRYCANVHISFTRKATVIANRMGSATLPD CHHHHHHHHHHHHHHHCCCCHHHCCCHHEEEEEEEECCHHHHHHHHCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11823852