Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

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The map label for this gene is yceI [C]

Identifier: 17547437

GI number: 17547437

Start: 2924254

End: 2924823

Strand: Reverse

Name: yceI [C]

Synonym: RSc2718

Alternate gene names: 17547437

Gene position: 2924823-2924254 (Counterclockwise)

Preceding gene: 17547438

Following gene: 17547436

Centisome position: 78.7

GC content: 64.56

Gene sequence:

>570_bases
ATGATGAAACGAGTTGCGCGTCCCCGCGCCCTTGGGCTGATCGCCGCCGGCGCCTTGTCGATCGCCGCGCTGTCGGCCAT
CGCCCAGGTGGATGCCGCCAAGAGCAGCGTGACGGCCACCGGCAAGCAACTGGGCGTGCCGATGGACATCAAGTTCGGCA
AGTTCGATGCGGCCGTGAGCTACAACCCGGCCAACCTGGCGGCCTCCACGGCCAAGGTCGACATCGATGTGTCCAGCGTC
GACGTGGGCGACAAGGCCTACAACGACGAACTGAAGAAGAAGGACTGGTTCGACGCCGCCAAGTATCCGAAGGCGACCTT
CGTGTCGTCCGCGTTCAAGCCGGGTGCCGGCGGCAAGGTGGAAGTGGTCGGCAAGCTGACCATCAAGGGCGTCACGCAGG
ACGTGACCGCGCCCTTCACCGTCAAGCAGGACGGCGCCAGCCAGGTGTTCGAGGGCGCGCTGCCGATCAAGCGCAATGCG
TTCCACGTCGGCGATGGCGAGTGGAAGGACACGTCGGTGGTCGCCGACGACGTGACCATCAAGTTCCGTGTCGTTCTCGC
CAAGAAGTAA

Upstream 100 bases:

>100_bases
TGAAGCGCGCGGGTTCCGAATGCGCCGGCATCGCGCCGGCCTCCTGTTTTCCGTCCCGACCATGACTGCCGGCACAGGCC
GGCCTGACAGAAGGAGTCTG

Downstream 100 bases:

>100_bases
TTCGCGTCTTTTTCTGTCGTTCCCTTTTTCGCCCCCTCTCTCTGCAGGAGCTCTCTCATGAAGTTGCGTACCCTTGTCGC
CGCACTGTCCGCCGTTGCCG

Product: signal peptide protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MMKRVARPRALGLIAAGALSIAALSAIAQVDAAKSSVTATGKQLGVPMDIKFGKFDAAVSYNPANLAASTAKVDIDVSSV
DVGDKAYNDELKKKDWFDAAKYPKATFVSSAFKPGAGGKVEVVGKLTIKGVTQDVTAPFTVKQDGASQVFEGALPIKRNA
FHVGDGEWKDTSVVADDVTIKFRVVLAKK

Sequences:

>Translated_189_residues
MMKRVARPRALGLIAAGALSIAALSAIAQVDAAKSSVTATGKQLGVPMDIKFGKFDAAVSYNPANLAASTAKVDIDVSSV
DVGDKAYNDELKKKDWFDAAKYPKATFVSSAFKPGAGGKVEVVGKLTIKGVTQDVTAPFTVKQDGASQVFEGALPIKRNA
FHVGDGEWKDTSVVADDVTIKFRVVLAKK
>Mature_189_residues
MMKRVARPRALGLIAAGALSIAALSAIAQVDAAKSSVTATGKQLGVPMDIKFGKFDAAVSYNPANLAASTAKVDIDVSSV
DVGDKAYNDELKKKDWFDAAKYPKATFVSSAFKPGAGGKVEVVGKLTIKGVTQDVTAPFTVKQDGASQVFEGALPIKRNA
FHVGDGEWKDTSVVADDVTIKFRVVLAKK

Specific function: Unknown

COG id: COG2353

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0312 family. Type 1 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007372 [H]

Pfam domain/function: PF04264 YceI [H]

EC number: NA

Molecular weight: Translated: 19832; Mature: 19832

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKRVARPRALGLIAAGALSIAALSAIAQVDAAKSSVTATGKQLGVPMDIKFGKFDAAVS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCEEEEECCCCCEEE
YNPANLAASTAKVDIDVSSVDVGDKAYNDELKKKDWFDAAKYPKATFVSSAFKPGAGGKV
ECCHHHCCCEEEEEEEEEEECCCCCHHCHHHHHCCCCCHHCCCCHHHHHHCCCCCCCCEE
EVVGKLTIKGVTQDVTAPFTVKQDGASQVFEGALPIKRNAFHVGDGEWKDTSVVADDVTI
EEEEEEEEECCCCCCCCCEEEECCCHHHHHHCCCCCCCCEEECCCCCCCCCEEEECCEEE
KFRVVLAKK
EEEEEEECC
>Mature Secondary Structure
MMKRVARPRALGLIAAGALSIAALSAIAQVDAAKSSVTATGKQLGVPMDIKFGKFDAAVS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCEEEEECCCCCEEE
YNPANLAASTAKVDIDVSSVDVGDKAYNDELKKKDWFDAAKYPKATFVSSAFKPGAGGKV
ECCHHHCCCEEEEEEEEEEECCCCCHHCHHHHHCCCCCHHCCCCHHHHHHCCCCCCCCEE
EVVGKLTIKGVTQDVTAPFTVKQDGASQVFEGALPIKRNAFHVGDGEWKDTSVVADDVTI
EEEEEEEEECCCCCCCCCEEEECCCHHHHHHCCCCCCCCEEECCCCCCCCCEEEECCEEE
KFRVVLAKK
EEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA