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The map label for this gene is oxyR [H]

Identifier: 17547409

GI number: 17547409

Start: 2896330

End: 2897283

Strand: Reverse

Name: oxyR [H]

Synonym: RSc2690

Alternate gene names: 17547409

Gene position: 2897283-2896330 (Counterclockwise)

Preceding gene: 17547410

Following gene: 17547408

Centisome position: 77.96

GC content: 66.88

Gene sequence:

>954_bases
TTGATTGCCATGACGCTCACCGAACTCAAATACATCGTCGCCGTTGCACGGGAACGCCACTTCGGGCGTGCCGCCGAAGC
CTGCTTTGTGTCGCAGCCGACGCTGTCGGTCGCCATCAAGAAGCTGGAGGATGAGCTTGCCGTGCAGATCTTCGAGCGCG
GTGCCTCCGAGGTGAGCGTCACGCCGGTGGGCGAACAGATCGTCACGCAGGCCCAGCACGTGCTGGAGCAGACCATGGCG
ATCCGCGAGATCGCCAAGCAGGGCATGGATCCGCTGGCCGGCCCCCTGCGCCTGGGCGTGATCTATACGATCGGGCCGTA
CCTGCTGCCGGCGCTGGTCAAGCAGATGATCGACACGGTCCCGCAGATGCCGCTGATGCTGCAGGAAAACTTCACCGCGC
GGCTGGTGGAACTGCTCAAGCAGGGCGAGATCGACTGCGCCATCATGGCCGAGCCGTTCCCGGAAGCCGGTCTGATGACG
GTGCCGCTGTACGACGAGCCCTTCGTGGTGGCGGTGCCGCGCGGCCATGCGCTGGCCGGTTCGTCGGCGGTGGATCCGGA
AGCGCTCAAGCAGCAGACCATGCTGCTGCTGGGTAACGGCCACTGCTTCCGCGACCACGTGCTCAATGTCTGCCCCGAGC
TCTCGCGCTTCTCGCAGAACGCAGACGGCATCCAGAAGACCTTCGAGGGGTCGTCGCTGGAGACGATCCGCCACATGGTG
GCCAGTGGCGTGGGGATCACCGTGCTGCCGCGCACCTCGGTGCCCGACATGCAGCCGGCCGCCGATCTGCTCGCCTACGT
GCCGTTCCAGGAGCCCGTGCCGGACCGCCGCGTCGTGCTGGCCTGGCGCAAGAGCTTCACCCGCGTCGCCGCCATCGAGG
CGGTGGCCAAGGCGGTTGCGCAATGCAGCCTGCCGGGCATCAAGCCGCTGCCTGTCACGCCGCTCGTCCACTGA

Upstream 100 bases:

>100_bases
GCTATTTTGAAATTTCCTTCGCTATGTCGACAAACAAGCCTCATCCACCCGAGCACAACCCCTCGTCTCAAGTTAAAATC
TATCGGTACCCTCAGGCCGA

Downstream 100 bases:

>100_bases
CGGAACCGGATGGCGCCGTCGCCTGGATGACGGCCATAGCGCACGCCTAATCGATAGATAAAAACAATCAAATTTTGAAT
TCTATAGGTCGTTGGTAGAC

Product: hydrogen peroxide-inducible genes activator transcription regulator protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MIAMTLTELKYIVAVARERHFGRAAEACFVSQPTLSVAIKKLEDELAVQIFERGASEVSVTPVGEQIVTQAQHVLEQTMA
IREIAKQGMDPLAGPLRLGVIYTIGPYLLPALVKQMIDTVPQMPLMLQENFTARLVELLKQGEIDCAIMAEPFPEAGLMT
VPLYDEPFVVAVPRGHALAGSSAVDPEALKQQTMLLLGNGHCFRDHVLNVCPELSRFSQNADGIQKTFEGSSLETIRHMV
ASGVGITVLPRTSVPDMQPAADLLAYVPFQEPVPDRRVVLAWRKSFTRVAAIEAVAKAVAQCSLPGIKPLPVTPLVH

Sequences:

>Translated_317_residues
MIAMTLTELKYIVAVARERHFGRAAEACFVSQPTLSVAIKKLEDELAVQIFERGASEVSVTPVGEQIVTQAQHVLEQTMA
IREIAKQGMDPLAGPLRLGVIYTIGPYLLPALVKQMIDTVPQMPLMLQENFTARLVELLKQGEIDCAIMAEPFPEAGLMT
VPLYDEPFVVAVPRGHALAGSSAVDPEALKQQTMLLLGNGHCFRDHVLNVCPELSRFSQNADGIQKTFEGSSLETIRHMV
ASGVGITVLPRTSVPDMQPAADLLAYVPFQEPVPDRRVVLAWRKSFTRVAAIEAVAKAVAQCSLPGIKPLPVTPLVH
>Mature_317_residues
MIAMTLTELKYIVAVARERHFGRAAEACFVSQPTLSVAIKKLEDELAVQIFERGASEVSVTPVGEQIVTQAQHVLEQTMA
IREIAKQGMDPLAGPLRLGVIYTIGPYLLPALVKQMIDTVPQMPLMLQENFTARLVELLKQGEIDCAIMAEPFPEAGLMT
VPLYDEPFVVAVPRGHALAGSSAVDPEALKQQTMLLLGNGHCFRDHVLNVCPELSRFSQNADGIQKTFEGSSLETIRHMV
ASGVGITVLPRTSVPDMQPAADLLAYVPFQEPVPDRRVVLAWRKSFTRVAAIEAVAKAVAQCSLPGIKPLPVTPLVH

Specific function: Required for the induction of a regulon of hydrogen peroxide inducible genes such as catalase and glutathione- reductase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790399, Length=296, Percent_Identity=38.8513513513513, Blast_Score=209, Evalue=2e-55,
Organism=Escherichia coli, GI1787530, Length=263, Percent_Identity=28.8973384030418, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1788748, Length=298, Percent_Identity=28.5234899328859, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI157672245, Length=311, Percent_Identity=27.3311897106109, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI2367136, Length=271, Percent_Identity=28.4132841328413, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI145693105, Length=288, Percent_Identity=26.7361111111111, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1788887, Length=288, Percent_Identity=26.0416666666667, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1787601, Length=143, Percent_Identity=31.4685314685315, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787879, Length=299, Percent_Identity=25.752508361204, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1788296, Length=246, Percent_Identity=24.7967479674797, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788481, Length=267, Percent_Identity=25.8426966292135, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI87082132, Length=269, Percent_Identity=24.1635687732342, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788297, Length=264, Percent_Identity=26.1363636363636, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI87081904, Length=177, Percent_Identity=32.2033898305085, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1787806, Length=286, Percent_Identity=22.7272727272727, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1789506, Length=277, Percent_Identity=20.2166064981949, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1790208, Length=149, Percent_Identity=32.8859060402685, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1790262, Length=195, Percent_Identity=26.1538461538462, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1786401, Length=247, Percent_Identity=25.9109311740891, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34490; Mature: 34490

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAMTLTELKYIVAVARERHFGRAAEACFVSQPTLSVAIKKLEDELAVQIFERGASEVSV
CCEEHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEE
TPVGEQIVTQAQHVLEQTMAIREIAKQGMDPLAGPLRLGVIYTIGPYLLPALVKQMIDTV
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
PQMPLMLQENFTARLVELLKQGEIDCAIMAEPFPEAGLMTVPLYDEPFVVAVPRGHALAG
CCCCHHHHCCHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCCCEEEEECCCCEECC
SSAVDPEALKQQTMLLLGNGHCFRDHVLNVCPELSRFSQNADGIQKTFEGSSLETIRHMV
CCCCCHHHHHHHHEEEEECCCCHHHHHHHHCHHHHHHCCCCHHHHHHCCCCHHHHHHHHH
ASGVGITVLPRTSVPDMQPAADLLAYVPFQEPVPDRRVVLAWRKSFTRVAAIEAVAKAVA
HCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QCSLPGIKPLPVTPLVH
HHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIAMTLTELKYIVAVARERHFGRAAEACFVSQPTLSVAIKKLEDELAVQIFERGASEVSV
CCEEHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEE
TPVGEQIVTQAQHVLEQTMAIREIAKQGMDPLAGPLRLGVIYTIGPYLLPALVKQMIDTV
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
PQMPLMLQENFTARLVELLKQGEIDCAIMAEPFPEAGLMTVPLYDEPFVVAVPRGHALAG
CCCCHHHHCCHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCCCEEEEECCCCEECC
SSAVDPEALKQQTMLLLGNGHCFRDHVLNVCPELSRFSQNADGIQKTFEGSSLETIRHMV
CCCCCHHHHHHHHEEEEECCCCHHHHHHHHCHHHHHHCCCCHHHHHHCCCCHHHHHHHHH
ASGVGITVLPRTSVPDMQPAADLLAYVPFQEPVPDRRVVLAWRKSFTRVAAIEAVAKAVA
HCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QCSLPGIKPLPVTPLVH
HHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA