| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17547408
Identifier: 17547408
GI number: 17547408
Start: 2895863
End: 2896111
Strand: Reverse
Name: 17547408
Synonym: RSc2689
Alternate gene names: NA
Gene position: 2896111-2895863 (Counterclockwise)
Preceding gene: 17547409
Following gene: 17547407
Centisome position: 77.93
GC content: 74.3
Gene sequence:
>249_bases ATGGCGCATCGCACTGACCCGCCCCGGATTCGCGAGGACGACCCCACGGGCAAGGACATCCCGACCTGCAGGCGGACCGG CGTGCCGTTCCGCCGGCTCGACGCGGGCCAGTGCCGGTGGCCGTTGGCCACCCTCGCCGATGCGGTGGCAGGCGTGCCGG AAGGCATCCGGCGCATGCAGACCGGCCCCTTCATCGGGGCCGATCCGGCTCACGGTGCGGGCGCCAGGACGGCGCCGGGA CTGCGGTAA
Upstream 100 bases:
>100_bases TGCCGCTCATCGCGCCATACCGTGGAGCCTGTCATGTCCCTGCATCTCGATTCCGCCAAGGCGACTGTTGCCGCGGCCGT GCTGGAATGGCTCGCTTCCT
Downstream 100 bases:
>100_bases AGCAACACAAGGCGCGCGGCGAACATGGATGCCGCGCACCGCTTGAAGGAGAAAGATCATGGCAATGGTGCGGATGTTCG TTTCGGAATGGCAGGCGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MAHRTDPPRIREDDPTGKDIPTCRRTGVPFRRLDAGQCRWPLATLADAVAGVPEGIRRMQTGPFIGADPAHGAGARTAPG LR
Sequences:
>Translated_82_residues MAHRTDPPRIREDDPTGKDIPTCRRTGVPFRRLDAGQCRWPLATLADAVAGVPEGIRRMQTGPFIGADPAHGAGARTAPG LR >Mature_81_residues AHRTDPPRIREDDPTGKDIPTCRRTGVPFRRLDAGQCRWPLATLADAVAGVPEGIRRMQTGPFIGADPAHGAGARTAPGL R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8798; Mature: 8667
Theoretical pI: Translated: 11.02; Mature: 11.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHRTDPPRIREDDPTGKDIPTCRRTGVPFRRLDAGQCRWPLATLADAVAGVPEGIRRMQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHH TGPFIGADPAHGAGARTAPGLR CCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AHRTDPPRIREDDPTGKDIPTCRRTGVPFRRLDAGQCRWPLATLADAVAGVPEGIRRMQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHH TGPFIGADPAHGAGARTAPGLR CCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA