| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is btuE [C]
Identifier: 17547393
GI number: 17547393
Start: 2882600
End: 2883097
Strand: Reverse
Name: btuE [C]
Synonym: RSc2674
Alternate gene names: 17547393
Gene position: 2883097-2882600 (Counterclockwise)
Preceding gene: 17547394
Following gene: 17547382
Centisome position: 77.58
GC content: 63.65
Gene sequence:
>498_bases ATGAGCGACATCTACGCGTTCGAGGCGGATTCACTGGCAGGCCAGCGCGTGCCGCTGTCGCAGTATCGCGGCAAGGTCCT GCTGATCGTCAACACGGCGAGCCAGTGCGGGTTCACGCCGCAATACGCCGGCCTGGAAGCGGTGTACAAGCGGCTGAACG AAAAGGGGCTGGAGGTCCTCGGCTTTCCGTGCAACCAGTTCGGCAAGCAGGAGCCGGGCGGGGCGGAGGAGATCGGCGCG TTCTGCGAGAAGAACTACGGGGTATCGTTCCCCATGTTCGGCAAGATCGAGGTGAACGGGTCGAACGCGCATCCGCTGTA CAAGTGGCTGACCTCGGAGAAGCCCGGCGTGCTGGGCACGGAAGCCATCAAGTGGAACTTCACCAAGTTTCTGCTGCGCC GCGACGGCACGGTCTACAAGCGCTACGCGCCGCTGACCAAGCCCGAGGAGATGCTCGGCGATATCGAGACGCTGCTGGCG GAGCCGGATCCGCTTTGA
Upstream 100 bases:
>100_bases ACTGAGACTGCGCTGACGTGACGGCCGCCATGCATTGGCGGCCGATTACAATGGGTCTTGTGGGCGGTTCGTTTCTTTCA CCGAATACCGGAGGATGACC
Downstream 100 bases:
>100_bases TCGGCGCGCGCCGGACCTAGTCCGTCGAACCCTTCACCTTGCGCATGAAGTCCGCCAGCGAGCGCTCGGCGGATTCAGCG AAATGCCGCGCCAGGATGTC
Product: glutathione peroxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MSDIYAFEADSLAGQRVPLSQYRGKVLLIVNTASQCGFTPQYAGLEAVYKRLNEKGLEVLGFPCNQFGKQEPGGAEEIGA FCEKNYGVSFPMFGKIEVNGSNAHPLYKWLTSEKPGVLGTEAIKWNFTKFLLRRDGTVYKRYAPLTKPEEMLGDIETLLA EPDPL
Sequences:
>Translated_165_residues MSDIYAFEADSLAGQRVPLSQYRGKVLLIVNTASQCGFTPQYAGLEAVYKRLNEKGLEVLGFPCNQFGKQEPGGAEEIGA FCEKNYGVSFPMFGKIEVNGSNAHPLYKWLTSEKPGVLGTEAIKWNFTKFLLRRDGTVYKRYAPLTKPEEMLGDIETLLA EPDPL >Mature_164_residues SDIYAFEADSLAGQRVPLSQYRGKVLLIVNTASQCGFTPQYAGLEAVYKRLNEKGLEVLGFPCNQFGKQEPGGAEEIGAF CEKNYGVSFPMFGKIEVNGSNAHPLYKWLTSEKPGVLGTEAIKWNFTKFLLRRDGTVYKRYAPLTKPEEMLGDIETLLAE PDPL
Specific function: Not Essential For B12 Transport; However, It Is An Auxiliary Component Of The Transport System. [C]
COG id: COG0386
COG function: function code O; Glutathione peroxidase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutathione peroxidase family [H]
Homologues:
Organism=Homo sapiens, GI75709200, Length=148, Percent_Identity=50, Blast_Score=140, Evalue=4e-34, Organism=Homo sapiens, GI90903240, Length=148, Percent_Identity=50, Blast_Score=140, Evalue=4e-34, Organism=Homo sapiens, GI15618997, Length=158, Percent_Identity=44.3037974683544, Blast_Score=133, Evalue=9e-32, Organism=Homo sapiens, GI192455698, Length=162, Percent_Identity=38.2716049382716, Blast_Score=121, Evalue=3e-28, Organism=Homo sapiens, GI90903238, Length=133, Percent_Identity=50.3759398496241, Blast_Score=120, Evalue=4e-28, Organism=Homo sapiens, GI41406084, Length=187, Percent_Identity=39.572192513369, Blast_Score=101, Evalue=2e-22, Organism=Homo sapiens, GI4557629, Length=183, Percent_Identity=37.1584699453552, Blast_Score=98, Evalue=3e-21, Organism=Homo sapiens, GI6006001, Length=181, Percent_Identity=36.4640883977901, Blast_Score=92, Evalue=2e-19, Organism=Homo sapiens, GI32967607, Length=179, Percent_Identity=33.5195530726257, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI33186887, Length=154, Percent_Identity=37.012987012987, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI41406082, Length=79, Percent_Identity=51.8987341772152, Blast_Score=65, Evalue=4e-11, Organism=Escherichia coli, GI1788003, Length=159, Percent_Identity=45.2830188679245, Blast_Score=145, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17535473, Length=163, Percent_Identity=50.3067484662577, Blast_Score=156, Evalue=6e-39, Organism=Caenorhabditis elegans, GI17506887, Length=162, Percent_Identity=47.5308641975309, Blast_Score=150, Evalue=3e-37, Organism=Caenorhabditis elegans, GI71993584, Length=160, Percent_Identity=41.25, Blast_Score=127, Evalue=4e-30, Organism=Caenorhabditis elegans, GI193210707, Length=163, Percent_Identity=40.4907975460123, Blast_Score=118, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17550320, Length=182, Percent_Identity=34.6153846153846, Blast_Score=108, Evalue=1e-24, Organism=Caenorhabditis elegans, GI193209493, Length=182, Percent_Identity=32.967032967033, Blast_Score=105, Evalue=1e-23, Organism=Caenorhabditis elegans, GI71993573, Length=97, Percent_Identity=39.1752577319588, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71999642, Length=75, Percent_Identity=41.3333333333333, Blast_Score=73, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6322228, Length=161, Percent_Identity=55.9006211180124, Blast_Score=193, Evalue=9e-51, Organism=Saccharomyces cerevisiae, GI6319721, Length=160, Percent_Identity=51.875, Blast_Score=185, Evalue=4e-48, Organism=Saccharomyces cerevisiae, GI6322826, Length=162, Percent_Identity=44.4444444444444, Blast_Score=153, Evalue=1e-38, Organism=Drosophila melanogaster, GI24656772, Length=160, Percent_Identity=43.75, Blast_Score=135, Evalue=9e-33, Organism=Drosophila melanogaster, GI24656777, Length=160, Percent_Identity=43.75, Blast_Score=135, Evalue=1e-32, Organism=Drosophila melanogaster, GI24656767, Length=160, Percent_Identity=43.75, Blast_Score=135, Evalue=1e-32, Organism=Drosophila melanogaster, GI85726443, Length=159, Percent_Identity=40.8805031446541, Blast_Score=114, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000889 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00255 GSHPx [H]
EC number: =1.11.1.9 [H]
Molecular weight: Translated: 18333; Mature: 18202
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: PS00460 GLUTATHIONE_PEROXID_1 ; PS00763 GLUTATHIONE_PEROXID_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDIYAFEADSLAGQRVPLSQYRGKVLLIVNTASQCGFTPQYAGLEAVYKRLNEKGLEVL CCCCEEECCCCCCCCCCCHHHHCCEEEEEEECHHHCCCCCCCCCHHHHHHHHHHCCCEEE GFPCNQFGKQEPGGAEEIGAFCEKNYGVSFPMFGKIEVNGSNAHPLYKWLTSEKPGVLGT ECCHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCC EAIKWNFTKFLLRRDGTVYKRYAPLTKPEEMLGDIETLLAEPDPL HHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SDIYAFEADSLAGQRVPLSQYRGKVLLIVNTASQCGFTPQYAGLEAVYKRLNEKGLEVL CCCEEECCCCCCCCCCCHHHHCCEEEEEEECHHHCCCCCCCCCHHHHHHHHHHCCCEEE GFPCNQFGKQEPGGAEEIGAFCEKNYGVSFPMFGKIEVNGSNAHPLYKWLTSEKPGVLGT ECCHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCC EAIKWNFTKFLLRRDGTVYKRYAPLTKPEEMLGDIETLLAEPDPL HHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]