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The map label for this gene is 17547382

Identifier: 17547382

GI number: 17547382

Start: 2872561

End: 2873118

Strand: Reverse

Name: 17547382

Synonym: RSc2663

Alternate gene names: NA

Gene position: 2873118-2872561 (Counterclockwise)

Preceding gene: 17547393

Following gene: 17547380

Centisome position: 77.31

GC content: 72.4

Gene sequence:

>558_bases
GTGGGCAACCGCTTATCCAAGATCGCCACCCGCACCGGCGACGACGGCACCACCGGCCTTGGCGACGGCAGCCGCACCGG
CAAGGACGGCCTGCGCATCGCCGCCATCGGCGAGGTCGACGAGCTGAATTCGCATCTCGGCGTGCTGCTGACGGAGCCCC
TGCCCGACGACGTGCACGCCGCGCTCACCGCCATCCAGCACGATCTGTTCGATCTCGGCGGCGAGCTGTGCATCCCCGGC
CACACCATGGTCACGCCCGCCCACGTGCTGCGGCTGGACCAGTGGCTGGCCGACTACAACGCCGACCTGCCGCGCCTGGC
CGAATTCATCCTGCCCGGCGGCAGCCGCGCCGCCGCGCAGGCGCATGTGTGCCGCACCGTCTGCCGCCGCGCCGAGCGCG
CCATCGTCGCGCTGGGCCGGGCGGAGACGCTGGGCGAGGCGCCCCGCCAGTATGTCAACCGGCTGTCCGACCTGCTGTTC
GTGCTGGCGCGCGTGCTCAACCGCGCCGGCGGCGGCCAGGACGTGCTGTGGGAGCATGAGCGGCACAAGCCCGTATAG

Upstream 100 bases:

>100_bases
CGCTGGGGCGGCGCCCCTTTTGGAGCCCATTCTAACGCCGGGGTCGCGCGCGGCTTGCGATAATGCCCACGCCACACCAA
CCCGCACAGGAGACGTCACC

Downstream 100 bases:

>100_bases
GGCGGTCGGCCCGCTACAAGCAAAACGGCCCGGCAGTCTCCCGCCGGGCCGTTTTGCTGCGCTGCCGCGCGCTTCAGTTC
ACGCTCACGGAGTGGCCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: Cob(I)alamin adenosyltransferase [H]

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MGNRLSKIATRTGDDGTTGLGDGSRTGKDGLRIAAIGEVDELNSHLGVLLTEPLPDDVHAALTAIQHDLFDLGGELCIPG
HTMVTPAHVLRLDQWLADYNADLPRLAEFILPGGSRAAAQAHVCRTVCRRAERAIVALGRAETLGEAPRQYVNRLSDLLF
VLARVLNRAGGGQDVLWEHERHKPV

Sequences:

>Translated_185_residues
MGNRLSKIATRTGDDGTTGLGDGSRTGKDGLRIAAIGEVDELNSHLGVLLTEPLPDDVHAALTAIQHDLFDLGGELCIPG
HTMVTPAHVLRLDQWLADYNADLPRLAEFILPGGSRAAAQAHVCRTVCRRAERAIVALGRAETLGEAPRQYVNRLSDLLF
VLARVLNRAGGGQDVLWEHERHKPV
>Mature_184_residues
GNRLSKIATRTGDDGTTGLGDGSRTGKDGLRIAAIGEVDELNSHLGVLLTEPLPDDVHAALTAIQHDLFDLGGELCIPGH
TMVTPAHVLRLDQWLADYNADLPRLAEFILPGGSRAAAQAHVCRTVCRRAERAIVALGRAETLGEAPRQYVNRLSDLLFV
LARVLNRAGGGQDVLWEHERHKPV

Specific function: Unknown

COG id: COG2096

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cob(I)alamin adenosyltransferase family [H]

Homologues:

Organism=Homo sapiens, GI16418349, Length=186, Percent_Identity=36.5591397849462, Blast_Score=113, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI115534154, Length=167, Percent_Identity=37.7245508982036, Blast_Score=94, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017858
- InterPro:   IPR002779
- InterPro:   IPR016030
- ProDom:   PD007457 [H]

Pfam domain/function: PF01923 Cob_adeno_trans [H]

EC number: =2.5.1.17 [H]

Molecular weight: Translated: 19962; Mature: 19831

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNRLSKIATRTGDDGTTGLGDGSRTGKDGLRIAAIGEVDELNSHLGVLLTEPLPDDVHA
CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHCCCEEECCCCCHHHHH
ALTAIQHDLFDLGGELCIPGHTMVTPAHVLRLDQWLADYNADLPRLAEFILPGGSRAAAQ
HHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHH
AHVCRTVCRRAERAIVALGRAETLGEAPRQYVNRLSDLLFVLARVLNRAGGGQDVLWEHE
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
RHKPV
CCCCC
>Mature Secondary Structure 
GNRLSKIATRTGDDGTTGLGDGSRTGKDGLRIAAIGEVDELNSHLGVLLTEPLPDDVHA
CCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHCCCEEECCCCCHHHHH
ALTAIQHDLFDLGGELCIPGHTMVTPAHVLRLDQWLADYNADLPRLAEFILPGGSRAAAQ
HHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHH
AHVCRTVCRRAERAIVALGRAETLGEAPRQYVNRLSDLLFVLARVLNRAGGGQDVLWEHE
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
RHKPV
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]