| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is pabB [H]
Identifier: 17547352
GI number: 17547352
Start: 2834813
End: 2836693
Strand: Reverse
Name: pabB [H]
Synonym: RSc2633
Alternate gene names: 17547352
Gene position: 2836693-2834813 (Counterclockwise)
Preceding gene: 17547353
Following gene: 17547342
Centisome position: 76.33
GC content: 72.51
Gene sequence:
>1881_bases ATGCCGTTGCCAGATGCCGGCGCGCCGTTCGCGCTGCTGGACGATGCCACCTCGGCCGGTGCGCCATGCTCGCGCTGGTA CACCGGCTATGCCGGCGAGATCGTCCGGCCGCCGGGCACGCTGGCGGGGCTGGACGATGCGCTGCGCGCGGCCTGGGCCG ACGGTTTGCATGCGCTGGTCCTGGCCCCGTACGAATTCGGCCGGCCGCTGGTCGGCTTGTTATCGGCCATGCCGGCGTCC GCTCGGTTGCCCGGCCACGACGGCTGTCTGCGCGTGCTGCTGTTCCGCTCGATGCAGGTGCTGTCGGCGGCCGAGGTCGA TGCGCTGTTCGACGCGTGGCCCGAGGCCGGTAGCGCTGCCGGCCTGTTCGACTGTGCGGCCAGCGTCGACCATGACGCCT ATGTTCACGCCATCGCCCGCATCCAGGACTGGATTGCCGCGGGCGATACCTACGAAGTCAATTACACGTACCGCCTGCGC ATGACGGCGTTCGGCGCGCCGGCCGCGCTGTATCGCCGCCTGCGCGCGCGCCAGCCGGTGCCGTACGGGGCGCTGATCGG ACTGCCGGAAGGCGGGGCAATCCTGTCGTGCTCGCCGGAACTGTTCTTCTCGCACCGCGCGGGCACCCTCGTCGCGCGGC CGATGAAGGGCACCGCGCCCGCCAGCGGCGATCCGGAAGTCGACCAGGCGCGCGCCGCCGCGCTCGCCGCCGACGAGAAG AACCGCGCCGAAAACCTGATGATTGTCGATCTGCTGCGCAATGACCTGGGCCGGCTCGCACGGCCGGGCTCGGTGCGCGT GCCGACGCTGTTCGAGGTGACGCCGTACGGCAGCGTGCTGCAGATGACCTCCACGGTGCAGGCGGAGATTCCGCCCGAAA CCGGCCTGGCCGACTGCCTCGCCGCGCTGTTTCCGTGCGGCTCCATCACGGGCGCGCCCAAGCGCCGGACCATGGAGATC ATCGACGCGCTGGAGCCGCAGCCGCGCGGCTTCTACACCGGCGCGATCGGCTGGATCGACGCGCCCAGCGGCGATCGCGC GATGGGCGACGCATGCTTTTCCGTGGCGATCCGCACGCTGGTGCTGGGGGCGCCCGGCACCGACGGCCTGCATTCGTGCG AGCTCGGCATCGGCTCCGGCATCGTGCACGACAGCGCCGCCGACGAGGAATACGCCGAGTGCCGGCTGAAGGCGCGCTTC GTCACCGCGCTCGATCCGGACCTGTCGCTGTTCGAGACGATGCGGGCGACGCGCGCCGAAGGCGTGCCCTTGCTGGAGCG GCATCTGGCGCGGCTGGCGCATTCCGCCCGTGCGTTCGGCTTCGGTTTCGACAGGGATGCGCTGGTGCGCGAGGTGGCGC GCGCGTGCGCCGCGCTGCCGGAGGCCGGCGCCCACCGCATGCGCCTGTCGCTGCGGCACAGCGGCGCATTCAGCGTCACG GCGGCGCCGCTGCCGCCGCTGCATGCCAGCTGGAATGCGCCGGTGCGCCTGCGCGTCGCGCCGCAGGCACGCGAGGCCGC GCACAGCCTGCCCCATCACAAGACCAGCCTGCGCGCCGCCTATGACGCAGCCTGGCAGGCCGCGGAGCGCGAGGGCGCGT TCGATGCCGTGTTCTTCAATGCCGACGGTACCCTGGCCGAGGGCGGCCGCAGCACGGTGCTGGTCAAGCTGGAGGGGCGG TGGTGGACGCCGCCGCTGTCGGCCGGCGTCCTGCCGGGCGTGATGCGCGCCGTGCTGCTGGAGGACGCGCGGCCGTGGCT CGGCGCGCCCTTGCATGAACGCGTGCTGACCCGTGCCGACGTCGTCCGCGCCGAGGCCATCGCCGTCTGCAACGCGCTAC GCGGCGTGGTGCCCGCGCATTTCGAGCCGCCCGTCGCTTAG
Upstream 100 bases:
>100_bases GCTCGCGGCACAGTCCGCAGGAGCAGTCGTGGCTGGACAAGGTGAAGAACTTCTTCTCCAGCTGAGCGCCGCGCTTTTGC TGTAACCGGGGGACATCGTC
Downstream 100 bases:
>100_bases CTTCCACCGGGTCACGCCGGGCAGGTTGATCAGCTCGCGGTCGTGGCACACCATCAGCAGCGCGCGGCCCTCGGCCGCCA GTTCGCCGACCAGCGCGAGC
Product: PARA-aminobenzoate synthetase component I protein
Products: NA
Alternate protein names: ADC synthase; Para-aminobenzoate synthase component I [H]
Number of amino acids: Translated: 626; Mature: 625
Protein sequence:
>626_residues MPLPDAGAPFALLDDATSAGAPCSRWYTGYAGEIVRPPGTLAGLDDALRAAWADGLHALVLAPYEFGRPLVGLLSAMPAS ARLPGHDGCLRVLLFRSMQVLSAAEVDALFDAWPEAGSAAGLFDCAASVDHDAYVHAIARIQDWIAAGDTYEVNYTYRLR MTAFGAPAALYRRLRARQPVPYGALIGLPEGGAILSCSPELFFSHRAGTLVARPMKGTAPASGDPEVDQARAAALAADEK NRAENLMIVDLLRNDLGRLARPGSVRVPTLFEVTPYGSVLQMTSTVQAEIPPETGLADCLAALFPCGSITGAPKRRTMEI IDALEPQPRGFYTGAIGWIDAPSGDRAMGDACFSVAIRTLVLGAPGTDGLHSCELGIGSGIVHDSAADEEYAECRLKARF VTALDPDLSLFETMRATRAEGVPLLERHLARLAHSARAFGFGFDRDALVREVARACAALPEAGAHRMRLSLRHSGAFSVT AAPLPPLHASWNAPVRLRVAPQAREAAHSLPHHKTSLRAAYDAAWQAAEREGAFDAVFFNADGTLAEGGRSTVLVKLEGR WWTPPLSAGVLPGVMRAVLLEDARPWLGAPLHERVLTRADVVRAEAIAVCNALRGVVPAHFEPPVA
Sequences:
>Translated_626_residues MPLPDAGAPFALLDDATSAGAPCSRWYTGYAGEIVRPPGTLAGLDDALRAAWADGLHALVLAPYEFGRPLVGLLSAMPAS ARLPGHDGCLRVLLFRSMQVLSAAEVDALFDAWPEAGSAAGLFDCAASVDHDAYVHAIARIQDWIAAGDTYEVNYTYRLR MTAFGAPAALYRRLRARQPVPYGALIGLPEGGAILSCSPELFFSHRAGTLVARPMKGTAPASGDPEVDQARAAALAADEK NRAENLMIVDLLRNDLGRLARPGSVRVPTLFEVTPYGSVLQMTSTVQAEIPPETGLADCLAALFPCGSITGAPKRRTMEI IDALEPQPRGFYTGAIGWIDAPSGDRAMGDACFSVAIRTLVLGAPGTDGLHSCELGIGSGIVHDSAADEEYAECRLKARF VTALDPDLSLFETMRATRAEGVPLLERHLARLAHSARAFGFGFDRDALVREVARACAALPEAGAHRMRLSLRHSGAFSVT AAPLPPLHASWNAPVRLRVAPQAREAAHSLPHHKTSLRAAYDAAWQAAEREGAFDAVFFNADGTLAEGGRSTVLVKLEGR WWTPPLSAGVLPGVMRAVLLEDARPWLGAPLHERVLTRADVVRAEAIAVCNALRGVVPAHFEPPVA >Mature_625_residues PLPDAGAPFALLDDATSAGAPCSRWYTGYAGEIVRPPGTLAGLDDALRAAWADGLHALVLAPYEFGRPLVGLLSAMPASA RLPGHDGCLRVLLFRSMQVLSAAEVDALFDAWPEAGSAAGLFDCAASVDHDAYVHAIARIQDWIAAGDTYEVNYTYRLRM TAFGAPAALYRRLRARQPVPYGALIGLPEGGAILSCSPELFFSHRAGTLVARPMKGTAPASGDPEVDQARAAALAADEKN RAENLMIVDLLRNDLGRLARPGSVRVPTLFEVTPYGSVLQMTSTVQAEIPPETGLADCLAALFPCGSITGAPKRRTMEII DALEPQPRGFYTGAIGWIDAPSGDRAMGDACFSVAIRTLVLGAPGTDGLHSCELGIGSGIVHDSAADEEYAECRLKARFV TALDPDLSLFETMRATRAEGVPLLERHLARLAHSARAFGFGFDRDALVREVARACAALPEAGAHRMRLSLRHSGAFSVTA APLPPLHASWNAPVRLRVAPQAREAAHSLPHHKTSLRAAYDAAWQAAEREGAFDAVFFNADGTLAEGGRSTVLVKLEGRW WTPPLSAGVLPGVMRAVLLEDARPWLGAPLHERVLTRADVVRAEAIAVCNALRGVVPAHFEPPVA
Specific function: Catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine [H]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1788114, Length=348, Percent_Identity=38.2183908045977, Blast_Score=192, Evalue=5e-50, Organism=Escherichia coli, GI1787518, Length=285, Percent_Identity=29.1228070175439, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1786809, Length=228, Percent_Identity=25, Blast_Score=71, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6320935, Length=273, Percent_Identity=33.3333333333333, Blast_Score=130, Evalue=5e-31, Organism=Saccharomyces cerevisiae, GI6324361, Length=310, Percent_Identity=31.2903225806452, Blast_Score=110, Evalue=6e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR015890 - InterPro: IPR005802 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =2.6.1.85 [H]
Molecular weight: Translated: 66542; Mature: 66410
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLPDAGAPFALLDDATSAGAPCSRWYTGYAGEIVRPPGTLAGLDDALRAAWADGLHALV CCCCCCCCCEEEECCCCCCCCCHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHCCCEEEE LAPYEFGRPLVGLLSAMPASARLPGHDGCLRVLLFRSMQVLSAAEVDALFDAWPEAGSAA ECCHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GLFDCAASVDHDAYVHAIARIQDWIAAGDTYEVNYTYRLRMTAFGAPAALYRRLRARQPV CHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEECCCHHHHHHHHHHCCCC PYGALIGLPEGGAILSCSPELFFSHRAGTLVARPMKGTAPASGDPEVDQARAAALAADEK CCCEEEECCCCCEEEEECHHHHCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCC NRAENLMIVDLLRNDLGRLARPGSVRVPTLFEVTPYGSVLQMTSTVQAEIPPETGLADCL CCCCCEEHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHEECCCCCCCHHHHH AALFPCGSITGAPKRRTMEIIDALEPQPRGFYTGAIGWIDAPSGDRAMGDACFSVAIRTL HHHCCCCCCCCCCCHHHHHHHHHCCCCCCCEEECCEEEEECCCCCCHHHHHHHHHHHHHH VLGAPGTDGLHSCELGIGSGIVHDSAADEEYAECRLKARFVTALDPDLSLFETMRATRAE HCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHEEEEEECCCCHHHHHHHHHHHCC GVPLLERHLARLAHSARAFGFGFDRDALVREVARACAALPEAGAHRMRLSLRHSGAFSVT CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCCEEEE AAPLPPLHASWNAPVRLRVAPQAREAAHSLPHHKTSLRAAYDAAWQAAEREGAFDAVFFN ECCCCCCCCCCCCCEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEC ADGTLAEGGRSTVLVKLEGRWWTPPLSAGVLPGVMRAVLLEDARPWLGAPLHERVLTRAD CCCCCCCCCCEEEEEEECCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH VVRAEAIAVCNALRGVVPAHFEPPVA HHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PLPDAGAPFALLDDATSAGAPCSRWYTGYAGEIVRPPGTLAGLDDALRAAWADGLHALV CCCCCCCCEEEECCCCCCCCCHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHCCCEEEE LAPYEFGRPLVGLLSAMPASARLPGHDGCLRVLLFRSMQVLSAAEVDALFDAWPEAGSAA ECCHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GLFDCAASVDHDAYVHAIARIQDWIAAGDTYEVNYTYRLRMTAFGAPAALYRRLRARQPV CHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEECCCHHHHHHHHHHCCCC PYGALIGLPEGGAILSCSPELFFSHRAGTLVARPMKGTAPASGDPEVDQARAAALAADEK CCCEEEECCCCCEEEEECHHHHCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCC NRAENLMIVDLLRNDLGRLARPGSVRVPTLFEVTPYGSVLQMTSTVQAEIPPETGLADCL CCCCCEEHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHEECCCCCCCHHHHH AALFPCGSITGAPKRRTMEIIDALEPQPRGFYTGAIGWIDAPSGDRAMGDACFSVAIRTL HHHCCCCCCCCCCCHHHHHHHHHCCCCCCCEEECCEEEEECCCCCCHHHHHHHHHHHHHH VLGAPGTDGLHSCELGIGSGIVHDSAADEEYAECRLKARFVTALDPDLSLFETMRATRAE HCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHEEEEEECCCCHHHHHHHHHHHCC GVPLLERHLARLAHSARAFGFGFDRDALVREVARACAALPEAGAHRMRLSLRHSGAFSVT CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCCEEEE AAPLPPLHASWNAPVRLRVAPQAREAAHSLPHHKTSLRAAYDAAWQAAEREGAFDAVFFN ECCCCCCCCCCCCCEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEC ADGTLAEGGRSTVLVKLEGRWWTPPLSAGVLPGVMRAVLLEDARPWLGAPLHERVLTRAD CCCCCCCCCCEEEEEEECCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH VVRAEAIAVCNALRGVVPAHFEPPVA HHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3057324; 2251281 [H]