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The map label for this gene is 17547270

Identifier: 17547270

GI number: 17547270

Start: 2759735

End: 2760784

Strand: Reverse

Name: 17547270

Synonym: RSc2551

Alternate gene names: NA

Gene position: 2760784-2759735 (Counterclockwise)

Preceding gene: 17547273

Following gene: 17547268

Centisome position: 74.29

GC content: 66.38

Gene sequence:

>1050_bases
ATGCACAAGCCGCACGGCAAGCACATCAACCTCGCGCTGCAGGGCGGCGGCGCGCACGGGGCGTTCACTTGGGGCGTGCT
CGACGCGCTGCTCGAAGACGGGCGCCTGTCGTTCGAGGGGCTGAGCGGCACCAGCGCCGGCTCGATGAATGCCGTGGTGA
TGCTCGACGGCCTGCTCGAGGGCGGCCCCGAGCGCGCGCGCGAGAAGCTGCATGCGTTCTGGCTGGCGGTGTCGACCGCG
GGCTCGCCGTTCTCCACGATGGGCGAGAACGCCAAGACGCTGCTGTCCGGCAGGCCCTTCTTTCCCGACAGCTGGCCGGT
GGCCGACTGGATGCGCATGTGGGACAGCTGGATCAGCGCGACCACCCAGGGCGCGCACTACAACCCGCTGCGCGACCTGC
TGGCGAACCAGGTGGACTTCGACCGCCTGCGCGCCTGCCCGGACACCAAACTGTTCCTCGCCGCCACGGACGTGAACACG
GGCAACGTGCGCGTCTTCGGCACCCCCGAGATCGATGTCGAGGTGGTGCTGGCCTCGGCCTGCCTGCCGTACCTGTACCC
GGCCATCGAGATCGACCGCCATCATTACTGGGACGGCGGCTACATGGGCAACCCGGTGCTGTTCCCGTTCTTCTACGAGA
CGAAGACGCAGGACATCCTGCTCGTGCACGTCAACCCGATCGTGCGCAAGGATGTGCCCGACCAGCCGCACGAAGTGATG
GAGCGCCTGAACGAGATCACCTTCAACGCGTCCCTGCTGCGCGAGATGCGCGCCATCGCCTTCGTGCAGAAGCTGATCGC
GGAGGACTGGCTCAAGCCCGAATACCGGGATCGGCTCAAATACATCTATCTGCACGCCATCCGTGCCGACCGGCCGCTGG
GCGACCTGTCGTCCTCGACCAAGCTGGTGACGGACTGGAGCTTCCTGACCATGCTCAAGGAGCGCGGCCGGCAGGAGGCC
AAGCTCTGGCTGCGCAAGCATTTCGACGATGTCGGCAGGAACGGCACCGTCGATATCCAGAACGAATACCTGCGCGGGCA
GGAGGTCTAG

Upstream 100 bases:

>100_bases
GACCGGCTGAGCGATGGTGTTGCGGACAGCACACGCGCAAACCGGTATTGTTGGATGTTCCGACGGGCGCCATGGGGGCG
CTCGCTTCCCGGGGGAGACC

Downstream 100 bases:

>100_bases
ACTCCCGGGCGGTGCGCGTCGCGCCGTCAGATGACGACGGGCTCGGGCTCGATGCGCACGCCGAAGCGCGCATGCACCGT
GTCCTGGATTTCGCGTGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: Patatin-Like Phospholipase; Alpha-Beta Hydrolase Family Esterase; Patatin Family Phospholipase; Phospholipase Patatin Family; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Transmembrane Protein; Esterase Of Alpha-Beta Hydrolase Superfamily; Serine Protease; Transmembrane Patatin-Like Phospholipase; Patatin-Like Phospholipase Domain-Containing Protein; FabD/Lysophospholipase-Like Esterase; FabD/Lysophospholipase-Like Protein; Alpha/Beta Hydrolase; Patatin-Like Phospholipase Family; FabD/Lysophospholipase; Esterase; Dehydrogenase/Reductase; Alpha/Beta Fold Family Hydrolase; Phospholipase Patatin Family Protein; Phospholipase; Transpatatin- Like Phospholipase Domain-Containing Protein

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MHKPHGKHINLALQGGGAHGAFTWGVLDALLEDGRLSFEGLSGTSAGSMNAVVMLDGLLEGGPERAREKLHAFWLAVSTA
GSPFSTMGENAKTLLSGRPFFPDSWPVADWMRMWDSWISATTQGAHYNPLRDLLANQVDFDRLRACPDTKLFLAATDVNT
GNVRVFGTPEIDVEVVLASACLPYLYPAIEIDRHHYWDGGYMGNPVLFPFFYETKTQDILLVHVNPIVRKDVPDQPHEVM
ERLNEITFNASLLREMRAIAFVQKLIAEDWLKPEYRDRLKYIYLHAIRADRPLGDLSSSTKLVTDWSFLTMLKERGRQEA
KLWLRKHFDDVGRNGTVDIQNEYLRGQEV

Sequences:

>Translated_349_residues
MHKPHGKHINLALQGGGAHGAFTWGVLDALLEDGRLSFEGLSGTSAGSMNAVVMLDGLLEGGPERAREKLHAFWLAVSTA
GSPFSTMGENAKTLLSGRPFFPDSWPVADWMRMWDSWISATTQGAHYNPLRDLLANQVDFDRLRACPDTKLFLAATDVNT
GNVRVFGTPEIDVEVVLASACLPYLYPAIEIDRHHYWDGGYMGNPVLFPFFYETKTQDILLVHVNPIVRKDVPDQPHEVM
ERLNEITFNASLLREMRAIAFVQKLIAEDWLKPEYRDRLKYIYLHAIRADRPLGDLSSSTKLVTDWSFLTMLKERGRQEA
KLWLRKHFDDVGRNGTVDIQNEYLRGQEV
>Mature_349_residues
MHKPHGKHINLALQGGGAHGAFTWGVLDALLEDGRLSFEGLSGTSAGSMNAVVMLDGLLEGGPERAREKLHAFWLAVSTA
GSPFSTMGENAKTLLSGRPFFPDSWPVADWMRMWDSWISATTQGAHYNPLRDLLANQVDFDRLRACPDTKLFLAATDVNT
GNVRVFGTPEIDVEVVLASACLPYLYPAIEIDRHHYWDGGYMGNPVLFPFFYETKTQDILLVHVNPIVRKDVPDQPHEVM
ERLNEITFNASLLREMRAIAFVQKLIAEDWLKPEYRDRLKYIYLHAIRADRPLGDLSSSTKLVTDWSFLTMLKERGRQEA
KLWLRKHFDDVGRNGTVDIQNEYLRGQEV

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39483; Mature: 39483

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKPHGKHINLALQGGGAHGAFTWGVLDALLEDGRLSFEGLSGTSAGSMNAVVMLDGLLE
CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCEEEEEEHHHC
GGPERAREKLHAFWLAVSTAGSPFSTMGENAKTLLSGRPFFPDSWPVADWMRMWDSWISA
CCHHHHHHHHHHHHHEEECCCCCHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
TTQGAHYNPLRDLLANQVDFDRLRACPDTKLFLAATDVNTGNVRVFGTPEIDVEVVLASA
CCCCCCCCHHHHHHHCCCCHHHHHCCCCCEEEEEEECCCCCCEEEEECCCCCHHHHHHHH
CLPYLYPAIEIDRHHYWDGGYMGNPVLFPFFYETKTQDILLVHVNPIVRKDVPDQPHEVM
HHHHHCCCEEECCEEEECCCCCCCCEEEEEEEECCCCCEEEEECCHHHHCCCCCCHHHHH
ERLNEITFNASLLREMRAIAFVQKLIAEDWLKPEYRDRLKYIYLHAIRADRPLGDLSSST
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECCCCCCCCCCCCC
KLVTDWSFLTMLKERGRQEAKLWLRKHFDDVGRNGTVDIQNEYLRGQEV
EEEEHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEECHHCCCCCCC
>Mature Secondary Structure
MHKPHGKHINLALQGGGAHGAFTWGVLDALLEDGRLSFEGLSGTSAGSMNAVVMLDGLLE
CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCEEEEEEHHHC
GGPERAREKLHAFWLAVSTAGSPFSTMGENAKTLLSGRPFFPDSWPVADWMRMWDSWISA
CCHHHHHHHHHHHHHEEECCCCCHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
TTQGAHYNPLRDLLANQVDFDRLRACPDTKLFLAATDVNTGNVRVFGTPEIDVEVVLASA
CCCCCCCCHHHHHHHCCCCHHHHHCCCCCEEEEEEECCCCCCEEEEECCCCCHHHHHHHH
CLPYLYPAIEIDRHHYWDGGYMGNPVLFPFFYETKTQDILLVHVNPIVRKDVPDQPHEVM
HHHHHCCCEEECCEEEECCCCCCCCEEEEEEEECCCCCEEEEECCHHHHCCCCCCHHHHH
ERLNEITFNASLLREMRAIAFVQKLIAEDWLKPEYRDRLKYIYLHAIRADRPLGDLSSST
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECCCCCCCCCCCCC
KLVTDWSFLTMLKERGRQEAKLWLRKHFDDVGRNGTVDIQNEYLRGQEV
EEEEHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEECHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA