| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is adk [H]
Identifier: 17547252
GI number: 17547252
Start: 2740594
End: 2741262
Strand: Direct
Name: adk [H]
Synonym: RSc2533
Alternate gene names: 17547252
Gene position: 2740594-2741262 (Clockwise)
Preceding gene: 17547251
Following gene: 17547253
Centisome position: 73.74
GC content: 65.17
Gene sequence:
>669_bases ATGCGGTTGATTCTGTTGGGCGCACCCGGCGCCGGCAAAGGTACGCAAGCCAAATTCATCTGCGAACGCTTCGGCATTCC GCAGATCTCCACCGGCGACATGCTGCGCGCCGCCGTCAAGGCCGGCACCCCGCTGGGCATCGAAGCCAAGAAGGTGATGG ACGCCGGCGGCCTGGTGTCCGACGACATCATCATCGGCCTGGTGAAGGACCGCCTGCAGCAGTCCGACTGCAAGAACGGC TACCTGTTCGACGGCTTCCCGCGCACCATCCCCCAGGCCGAAGCCATGAAGGATGCCGGCGTGCCGATCGACTACGTGCT GGAAATCGACGTGCCGTTCGACGCCATCATCGAGCGCATGAGCGGCCGCCGCGTGCACGTGGCCTCGGGCCGGACCTATC ACGTCAAGTACAACCCGCCCAAGAACGAGGGCCAGGACGACGAAACCGGCGATCCGCTGATCCAGCGCGACGACGACAAG GAAGAAACCGTCCGCAAGCGCCTGTCCGTGTACGAGAACCAGACCCGCCCGCTGGTGGACTACTACTCCGGCTGGGCCGA GAACGGCAACGGTGCCGCCAAGGTGGCGCCGCCCAAGTACCGCAAGATCAGCGGGATCGGCAACGTGGAAGACATCACCG GCCGCGTGTTCGGCGCACTGGAAGCCTGA
Upstream 100 bases:
>100_bases CACCAGACGTTTTGGGAATCGGTCCCGCGCACCGGACCGATTCCCAACGCGTTTCAAGCAATTGGCGCACCGGAATTTAA AACTTGAGGAACTCGTCACC
Downstream 100 bases:
>100_bases CCCGGCCGCTACACCGCACCACCGAAACGCTCCGCTTGCCGGAGCGTTTTTTTTTTTGCGCGCGCCGACCGCCCGGCCTG CCGTCCACCGCCGGCTTCGC
Product: adenylate kinase
Products: NA
Alternate protein names: AK; ATP-AMP transphosphorylase [H]
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MRLILLGAPGAGKGTQAKFICERFGIPQISTGDMLRAAVKAGTPLGIEAKKVMDAGGLVSDDIIIGLVKDRLQQSDCKNG YLFDGFPRTIPQAEAMKDAGVPIDYVLEIDVPFDAIIERMSGRRVHVASGRTYHVKYNPPKNEGQDDETGDPLIQRDDDK EETVRKRLSVYENQTRPLVDYYSGWAENGNGAAKVAPPKYRKISGIGNVEDITGRVFGALEA
Sequences:
>Translated_222_residues MRLILLGAPGAGKGTQAKFICERFGIPQISTGDMLRAAVKAGTPLGIEAKKVMDAGGLVSDDIIIGLVKDRLQQSDCKNG YLFDGFPRTIPQAEAMKDAGVPIDYVLEIDVPFDAIIERMSGRRVHVASGRTYHVKYNPPKNEGQDDETGDPLIQRDDDK EETVRKRLSVYENQTRPLVDYYSGWAENGNGAAKVAPPKYRKISGIGNVEDITGRVFGALEA >Mature_222_residues MRLILLGAPGAGKGTQAKFICERFGIPQISTGDMLRAAVKAGTPLGIEAKKVMDAGGLVSDDIIIGLVKDRLQQSDCKNG YLFDGFPRTIPQAEAMKDAGVPIDYVLEIDVPFDAIIERMSGRRVHVASGRTYHVKYNPPKNEGQDDETGDPLIQRDDDK EETVRKRLSVYENQTRPLVDYYSGWAENGNGAAKVAPPKYRKISGIGNVEDITGRVFGALEA
Specific function: Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. This small ubiquitous enzyme involved in the energy metabolism and nucleotide synthesis, is essential for maintenance and cell growth [H]
COG id: COG0563
COG function: function code F; Adenylate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylate kinase family [H]
Homologues:
Organism=Homo sapiens, GI7524346, Length=186, Percent_Identity=48.3870967741936, Blast_Score=192, Evalue=3e-49, Organism=Homo sapiens, GI4502013, Length=186, Percent_Identity=48.3870967741936, Blast_Score=191, Evalue=3e-49, Organism=Homo sapiens, GI19923437, Length=182, Percent_Identity=47.2527472527472, Blast_Score=182, Evalue=2e-46, Organism=Homo sapiens, GI310110345, Length=182, Percent_Identity=40.1098901098901, Blast_Score=151, Evalue=4e-37, Organism=Homo sapiens, GI53832003, Length=182, Percent_Identity=40.1098901098901, Blast_Score=151, Evalue=4e-37, Organism=Homo sapiens, GI8051579, Length=182, Percent_Identity=40.1098901098901, Blast_Score=151, Evalue=4e-37, Organism=Homo sapiens, GI53832001, Length=182, Percent_Identity=40.1098901098901, Blast_Score=151, Evalue=4e-37, Organism=Homo sapiens, GI22749187, Length=191, Percent_Identity=30.3664921465969, Blast_Score=101, Evalue=4e-22, Organism=Homo sapiens, GI4502011, Length=222, Percent_Identity=27.027027027027, Blast_Score=89, Evalue=2e-18, Organism=Homo sapiens, GI7706497, Length=188, Percent_Identity=29.7872340425532, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI28144899, Length=223, Percent_Identity=25.1121076233184, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI28144897, Length=223, Percent_Identity=25.1121076233184, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI21450759, Length=139, Percent_Identity=25.1798561151079, Blast_Score=65, Evalue=4e-11, Organism=Escherichia coli, GI1786680, Length=212, Percent_Identity=62.7358490566038, Blast_Score=276, Evalue=7e-76, Organism=Caenorhabditis elegans, GI17552384, Length=186, Percent_Identity=46.7741935483871, Blast_Score=188, Evalue=2e-48, Organism=Caenorhabditis elegans, GI17537943, Length=184, Percent_Identity=36.4130434782609, Blast_Score=131, Evalue=3e-31, Organism=Caenorhabditis elegans, GI17567503, Length=221, Percent_Identity=28.9592760180996, Blast_Score=100, Evalue=8e-22, Organism=Caenorhabditis elegans, GI17550688, Length=184, Percent_Identity=28.804347826087, Blast_Score=74, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17533833, Length=184, Percent_Identity=27.1739130434783, Blast_Score=74, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6320432, Length=194, Percent_Identity=50, Blast_Score=209, Evalue=4e-55, Organism=Saccharomyces cerevisiae, GI6321018, Length=186, Percent_Identity=44.6236559139785, Blast_Score=147, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6322828, Length=183, Percent_Identity=28.4153005464481, Blast_Score=81, Evalue=1e-16, Organism=Drosophila melanogaster, GI22026816, Length=183, Percent_Identity=50.2732240437158, Blast_Score=196, Evalue=8e-51, Organism=Drosophila melanogaster, GI17737899, Length=182, Percent_Identity=42.8571428571429, Blast_Score=154, Evalue=6e-38, Organism=Drosophila melanogaster, GI24645822, Length=182, Percent_Identity=42.8571428571429, Blast_Score=154, Evalue=6e-38, Organism=Drosophila melanogaster, GI17647141, Length=219, Percent_Identity=28.7671232876712, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24663208, Length=219, Percent_Identity=28.7671232876712, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI221459597, Length=186, Percent_Identity=27.9569892473118, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI21356893, Length=186, Percent_Identity=27.9569892473118, Blast_Score=75, Evalue=5e-14,
Paralogues:
None
Copy number: 1640 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 847 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006259 - InterPro: IPR000850 - InterPro: IPR007862 [H]
Pfam domain/function: PF00406 ADK; PF05191 ADK_lid [H]
EC number: =2.7.4.3 [H]
Molecular weight: Translated: 24224; Mature: 24224
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: PS00113 ADENYLATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLILLGAPGAGKGTQAKFICERFGIPQISTGDMLRAAVKAGTPLGIEAKKVMDAGGLVS CEEEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCCC DDIIIGLVKDRLQQSDCKNGYLFDGFPRTIPQAEAMKDAGVPIDYVLEIDVPFDAIIERM CHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHCCCCEEEEEEECCCHHHHHHHH SGRRVHVASGRTYHVKYNPPKNEGQDDETGDPLIQRDDDKEETVRKRLSVYENQTRPLVD CCCEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHH YYSGWAENGNGAAKVAPPKYRKISGIGNVEDITGRVFGALEA HHCCCCCCCCCCEEECCCCHHEECCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MRLILLGAPGAGKGTQAKFICERFGIPQISTGDMLRAAVKAGTPLGIEAKKVMDAGGLVS CEEEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCCC DDIIIGLVKDRLQQSDCKNGYLFDGFPRTIPQAEAMKDAGVPIDYVLEIDVPFDAIIERM CHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHCCCCEEEEEEECCCHHHHHHHH SGRRVHVASGRTYHVKYNPPKNEGQDDETGDPLIQRDDDKEETVRKRLSVYENQTRPLVD CCCEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHH YYSGWAENGNGAAKVAPPKYRKISGIGNVEDITGRVFGALEA HHCCCCCCCCCCEEECCCCHHEECCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA