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The map label for this gene is ycaR [C]

Identifier: 17547250

GI number: 17547250

Start: 2739261

End: 2739449

Strand: Direct

Name: ycaR [C]

Synonym: RSc2531

Alternate gene names: 17547250

Gene position: 2739261-2739449 (Clockwise)

Preceding gene: 17547249

Following gene: 17547251

Centisome position: 73.71

GC content: 64.55

Gene sequence:

>189_bases
ATGGACAATCGCCTGCTGGAAATCCTGGTCTGCCCGCTGTGCAAGGGCACGCTGCAACACGACCGCGCCCATAACGAACT
GATCTGCCACGTCGACAAGCTGGCCTATCCGATCCGCGATGGCATCCCCGTGATGCTGGCCGACGAGGCGCGCCAGACCG
TCGAAGGCACGCCGGTCGATCCGGCCTGA

Upstream 100 bases:

>100_bases
CCCTGGCCGATCGCTCAACTTCTCAGGCTGGCGCACAATAACGACTGTGCCCCCGCCGCATCGGCGGGCTGCCGTGCCGC
CCGCCCGGAGCCTTACCGTC

Downstream 100 bases:

>100_bases
CGCGGACGACGCCCCGCCATGTCGCACGCGCCGTTCATTGCCGTCATCCCCGCGCGGCTCGCCTCCACGCGGCTGCCCAA
CAAGCCGCTGGCCGACATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 62

Protein sequence:

>62_residues
MDNRLLEILVCPLCKGTLQHDRAHNELICHVDKLAYPIRDGIPVMLADEARQTVEGTPVDPA

Sequences:

>Translated_62_residues
MDNRLLEILVCPLCKGTLQHDRAHNELICHVDKLAYPIRDGIPVMLADEARQTVEGTPVDPA
>Mature_62_residues
MDNRLLEILVCPLCKGTLQHDRAHNELICHVDKLAYPIRDGIPVMLADEARQTVEGTPVDPA

Specific function: Unknown

COG id: COG2835

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0434 family

Homologues:

Organism=Escherichia coli, GI1787146, Length=51, Percent_Identity=58.8235294117647, Blast_Score=70, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2531_RALSO (Q8XWE3)

Other databases:

- EMBL:   AL646052
- RefSeq:   NP_520652.1
- ProteinModelPortal:   Q8XWE3
- SMR:   Q8XWE3
- GeneID:   1221378
- GenomeReviews:   AL646052_GR
- KEGG:   rso:RSc2531
- NMPDR:   fig|267608.1.peg.2531
- HOGENOM:   HBG713593
- OMA:   NELVSEK
- ProtClustDB:   CLSK897353
- BioCyc:   RSOL267608:RSC2531-MONOMER
- HAMAP:   MF_01187
- InterPro:   IPR005651

Pfam domain/function: PF03966 Trm112p

EC number: NA

Molecular weight: Translated: 6906; Mature: 6906

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNRLLEILVCPLCKGTLQHDRAHNELICHVDKLAYPIRDGIPVMLADEARQTVEGTPVD
CCCHHHHHHHCHHCCCCCCCCCCCCCEEEEHHHHCCCCCCCCCEEEECCCHHHCCCCCCC
PA
CC
>Mature Secondary Structure
MDNRLLEILVCPLCKGTLQHDRAHNELICHVDKLAYPIRDGIPVMLADEARQTVEGTPVD
CCCHHHHHHHCHHCCCCCCCCCCCCCEEEEHHHHCCCCCCCCCEEEECCCHHHCCCCCCC
PA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852