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The map label for this gene is rpfG [H]

Identifier: 17547234

GI number: 17547234

Start: 2721369

End: 2722577

Strand: Direct

Name: rpfG [H]

Synonym: RSc2515

Alternate gene names: 17547234

Gene position: 2721369-2722577 (Clockwise)

Preceding gene: 17547233

Following gene: 17547235

Centisome position: 73.23

GC content: 67.82

Gene sequence:

>1209_bases
ATGCGCAAGCGCATCGCAATCGAACACCTGCAGGTCGGCATGTACCTGGAGGAATTTGTCGACTCATGGCTGGACCACCC
GTTCTGGCGGGCCCGCTTTCGCGTCGAAGACACGGCCCAGCTGCAGCGCCTGCGCGCGAGCGGCATCCGCGAGGTGTGGA
TCGATACCTCGCGCGGCAAGGACGTCGCCGCCGGCGCGGCTGCGCCCGCAGCGGCCGACATGCCGGCGCCCCCGCAGCCG
CAGCTGGAAACCGCCATTGCGCCGCGCCCGGCCACGCTCGCCGACGAGATGCGCCGCGCCGCGCGCATCATCGACAAGGC
GGGCATCGCGGTCCAGGCCATGTTCGCCGAGGCGCGCATGGGGCGGACCATCGAAGCACGCGATGCGCAGCCGCTGGTGG
AGGCCATCTCCGGCTCGGTCGACCGCCACCCCGGCGCGCTGGTCAGTCTGGCGCGCCTGAAGACCAAGGACCGCTACACC
TTCCTGCATTCGGTGGCGGTCTGCGCGCTGATGGTGGCGCTCGGCCGCCAGCTCGGCCTGTCCGATGACGAAGTGCGCGA
CGCCGGGCTGGCCGGGCTGCTGCACGACATCGGCAAGATCGCGATTCCGCCCGAGGTGCTGAACAAGCCGGGCGCGCTCA
CCACCGACGAGTTCCGCCACGTGATCGGGCATCCGAAGGCCGGATACGACATCCTGGTCGGTGATCCCAGCATGCGCGAC
ATCGCGCTCGACGTCTGCCTGCACCATCACGAGCGGATGGACGGCACCGGCTATCCGCACAAGCTGGCCGGCGAGAACAT
CTCGCTGTTCGCCCGCATGGGCGCCATCTGCGACGTCTACGATGCGGTGACCTCCGACCGGCCCTACAAGAAGGCATGGG
AAGCCGCCTATGCGATCCAGCGCATGGTGGAATGGCGCGGCAACCATTTCGACCCGATGGTGTTCCAGGCCTTCGTCAAG
AGCGTGGGCATCTATCCGACCGGCTCGCTGGTGCGGCTGCGTTCGGGTAGGCTGGCGGTGGTCATGGAACATGCGTCCGG
CGCATTGCTCTCGCCCACGGTCAAGGTATTCTTCTCGATATCCTCGGGCACGCGCATCACGCCCGAAGTCATCGACCTGG
CGCAGACCGGCGACCAGATCGTCTCGCGCGAAGAACCCGGCGACTGGGGCCTGACCGACCTCCACGAACTTTGGATACAC
GGCGACTGA

Upstream 100 bases:

>100_bases
CGGACGCGTCCGATATGAAAGACAGCAGGCATTGGCACGGCCGCGTTCTCCTTGTGCGAAACGCCCCGGCCAACGCATCG
GATCGTCGGACAACACCAAC

Downstream 100 bases:

>100_bases
TCCGCAATCCGTTCCTGCGGCGCCTCCTGGCATGGATGGCGCTCGGATGGCTGGCGTGCGGCACGCTGGCCTGGGCGGAA
GCGCCGCTGCGGATCGGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MRKRIAIEHLQVGMYLEEFVDSWLDHPFWRARFRVEDTAQLQRLRASGIREVWIDTSRGKDVAAGAAAPAAADMPAPPQP
QLETAIAPRPATLADEMRRAARIIDKAGIAVQAMFAEARMGRTIEARDAQPLVEAISGSVDRHPGALVSLARLKTKDRYT
FLHSVAVCALMVALGRQLGLSDDEVRDAGLAGLLHDIGKIAIPPEVLNKPGALTTDEFRHVIGHPKAGYDILVGDPSMRD
IALDVCLHHHERMDGTGYPHKLAGENISLFARMGAICDVYDAVTSDRPYKKAWEAAYAIQRMVEWRGNHFDPMVFQAFVK
SVGIYPTGSLVRLRSGRLAVVMEHASGALLSPTVKVFFSISSGTRITPEVIDLAQTGDQIVSREEPGDWGLTDLHELWIH
GD

Sequences:

>Translated_402_residues
MRKRIAIEHLQVGMYLEEFVDSWLDHPFWRARFRVEDTAQLQRLRASGIREVWIDTSRGKDVAAGAAAPAAADMPAPPQP
QLETAIAPRPATLADEMRRAARIIDKAGIAVQAMFAEARMGRTIEARDAQPLVEAISGSVDRHPGALVSLARLKTKDRYT
FLHSVAVCALMVALGRQLGLSDDEVRDAGLAGLLHDIGKIAIPPEVLNKPGALTTDEFRHVIGHPKAGYDILVGDPSMRD
IALDVCLHHHERMDGTGYPHKLAGENISLFARMGAICDVYDAVTSDRPYKKAWEAAYAIQRMVEWRGNHFDPMVFQAFVK
SVGIYPTGSLVRLRSGRLAVVMEHASGALLSPTVKVFFSISSGTRITPEVIDLAQTGDQIVSREEPGDWGLTDLHELWIH
GD
>Mature_402_residues
MRKRIAIEHLQVGMYLEEFVDSWLDHPFWRARFRVEDTAQLQRLRASGIREVWIDTSRGKDVAAGAAAPAAADMPAPPQP
QLETAIAPRPATLADEMRRAARIIDKAGIAVQAMFAEARMGRTIEARDAQPLVEAISGSVDRHPGALVSLARLKTKDRYT
FLHSVAVCALMVALGRQLGLSDDEVRDAGLAGLLHDIGKIAIPPEVLNKPGALTTDEFRHVIGHPKAGYDILVGDPSMRD
IALDVCLHHHERMDGTGYPHKLAGENISLFARMGAICDVYDAVTSDRPYKKAWEAAYAIQRMVEWRGNHFDPMVFQAFVK
SVGIYPTGSLVRLRSGRLAVVMEHASGALLSPTVKVFFSISSGTRITPEVIDLAQTGDQIVSREEPGDWGLTDLHELWIH
GD

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 44213; Mature: 44213

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKRIAIEHLQVGMYLEEFVDSWLDHPFWRARFRVEDTAQLQRLRASGIREVWIDTSRGK
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHEECCCHHHHHHHHHHCCCCEEEEECCCCC
DVAAGAAAPAAADMPAPPQPQLETAIAPRPATLADEMRRAARIIDKAGIAVQAMFAEARM
CCCCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
GRTIEARDAQPLVEAISGSVDRHPGALVSLARLKTKDRYTFLHSVAVCALMVALGRQLGL
CCEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
SDDEVRDAGLAGLLHDIGKIAIPPEVLNKPGALTTDEFRHVIGHPKAGYDILVGDPSMRD
CCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHCCCCCCCEEEECCCCHHH
IALDVCLHHHERMDGTGYPHKLAGENISLFARMGAICDVYDAVTSDRPYKKAWEAAYAIQ
HHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
RMVEWRGNHFDPMVFQAFVKSVGIYPTGSLVRLRSGRLAVVMEHASGALLSPTVKVFFSI
HHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCCCCCCCEEEEEEEE
SSGTRITPEVIDLAQTGDQIVSREEPGDWGLTDLHELWIHGD
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MRKRIAIEHLQVGMYLEEFVDSWLDHPFWRARFRVEDTAQLQRLRASGIREVWIDTSRGK
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHEECCCHHHHHHHHHHCCCCEEEEECCCCC
DVAAGAAAPAAADMPAPPQPQLETAIAPRPATLADEMRRAARIIDKAGIAVQAMFAEARM
CCCCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
GRTIEARDAQPLVEAISGSVDRHPGALVSLARLKTKDRYTFLHSVAVCALMVALGRQLGL
CCEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
SDDEVRDAGLAGLLHDIGKIAIPPEVLNKPGALTTDEFRHVIGHPKAGYDILVGDPSMRD
CCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHCCCCCCCEEEECCCCHHH
IALDVCLHHHERMDGTGYPHKLAGENISLFARMGAICDVYDAVTSDRPYKKAWEAAYAIQ
HHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
RMVEWRGNHFDPMVFQAFVKSVGIYPTGSLVRLRSGRLAVVMEHASGALLSPTVKVFFSI
HHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCCCCCCCEEEEEEEE
SSGTRITPEVIDLAQTGDQIVSREEPGDWGLTDLHELWIHGD
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]