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The map label for this gene is ypfJ [H]

Identifier: 17547222

GI number: 17547222

Start: 2709841

End: 2710728

Strand: Direct

Name: ypfJ [H]

Synonym: RSc2503

Alternate gene names: 17547222

Gene position: 2709841-2710728 (Clockwise)

Preceding gene: 17547220

Following gene: 17547224

Centisome position: 72.92

GC content: 69.71

Gene sequence:

>888_bases
GTGCGTTGGGATGACATGCGCGAAAGCGAGAACGTCGAGGATGATCGCGCATCCTCGAGTGGCGGCGGCTTCGGCGGCGG
CGGGATGCGCCTGGGCGTGGGCGGTATCGCGCTGGTGGCGGTGGTCGGCCTGCTGATGGGCAAGAACCCGCTGGAAATCC
TCGGCATGGTGATGCAGGTGTCGCAGAACGCGCCCGTGCAGAGTGCACCGCATGGCGCCGCGCGGCCCACCGGCGAGACC
GACAACGACCACAGCAAATCGATGGTGAGCCACGTGCTGGGCGACACCGAAGACACCTGGTCGCAACTCTTCAAGCAGGC
CGGCCGCGCCTATCAGCCGCCCAAGCTGGTGCTGTTCCGCCAGGGCATCCGCTCGGGTTGCGGCGACGCCACTTCGGCGG
TCGGCCCGTTCTACTGCCCGGCCGATACCAAGGTCTACCTGGATCTCGGCTTCTTCGACGAACTGCGCCGCCGCTTCGGC
GCGCCGGGCGACTTCGCGGCCGCCTACGTGGTCGCGCACGAGGTCGGCCACCATGTGCAGAATCTGCTCGGCGTCTCGGA
GAAGGTCAGCCGCGCGCAGGCCGGCCAGTCGCAACGCGTGTCGAACGCGCTGTCGGTCAAGCTGGAACTGCAGGCCGACT
GCCTGGCCGGCGTGTGGGGCCACTACGCGCAGCAGCGCGGCCTGCTCGAGCGCGGCGACCTGGAACAGGCCCTCACCGCC
GCGCACGCCATCGGCGACGATACCCTGCAGCGCAACGCCGGCCGCAGCGTCGCGCCCGATGCGTTCACGCACGGCACCTC
GGAACAGCGCATGCACTGGTTCCGCCAGGGCTTCGACGGCGGCGATATCCGGCAGTGCGACACCTTCCGCGCCGGGGCCG
ATGCCTGA

Upstream 100 bases:

>100_bases
TTTCCGGACGGCCGGCATGCGCGGATGGCACGAGGCCGGGTAGACTTTGCAAAGTTTGCCGGGTGCAACACCCGGGGGTC
TGCGCAGCAAGGAGAGAGAC

Downstream 100 bases:

>100_bases
CGCGTCAGCGCCCGCCTGAGCAGTCCAGCAGCGCCCCCGTCACGTACGACGCCGCATCCGACAGCAGCCAGACGATGGTC
TCGGCCACCTCCGCGGCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MRWDDMRESENVEDDRASSSGGGFGGGGMRLGVGGIALVAVVGLLMGKNPLEILGMVMQVSQNAPVQSAPHGAARPTGET
DNDHSKSMVSHVLGDTEDTWSQLFKQAGRAYQPPKLVLFRQGIRSGCGDATSAVGPFYCPADTKVYLDLGFFDELRRRFG
APGDFAAAYVVAHEVGHHVQNLLGVSEKVSRAQAGQSQRVSNALSVKLELQADCLAGVWGHYAQQRGLLERGDLEQALTA
AHAIGDDTLQRNAGRSVAPDAFTHGTSEQRMHWFRQGFDGGDIRQCDTFRAGADA

Sequences:

>Translated_295_residues
MRWDDMRESENVEDDRASSSGGGFGGGGMRLGVGGIALVAVVGLLMGKNPLEILGMVMQVSQNAPVQSAPHGAARPTGET
DNDHSKSMVSHVLGDTEDTWSQLFKQAGRAYQPPKLVLFRQGIRSGCGDATSAVGPFYCPADTKVYLDLGFFDELRRRFG
APGDFAAAYVVAHEVGHHVQNLLGVSEKVSRAQAGQSQRVSNALSVKLELQADCLAGVWGHYAQQRGLLERGDLEQALTA
AHAIGDDTLQRNAGRSVAPDAFTHGTSEQRMHWFRQGFDGGDIRQCDTFRAGADA
>Mature_295_residues
MRWDDMRESENVEDDRASSSGGGFGGGGMRLGVGGIALVAVVGLLMGKNPLEILGMVMQVSQNAPVQSAPHGAARPTGET
DNDHSKSMVSHVLGDTEDTWSQLFKQAGRAYQPPKLVLFRQGIRSGCGDATSAVGPFYCPADTKVYLDLGFFDELRRRFG
APGDFAAAYVVAHEVGHHVQNLLGVSEKVSRAQAGQSQRVSNALSVKLELQADCLAGVWGHYAQQRGLLERGDLEQALTA
AHAIGDDTLQRNAGRSVAPDAFTHGTSEQRMHWFRQGFDGGDIRQCDTFRAGADA

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=293, Percent_Identity=51.5358361774744, Blast_Score=283, Evalue=7e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 31613; Mature: 31613

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWDDMRESENVEDDRASSSGGGFGGGGMRLGVGGIALVAVVGLLMGKNPLEILGMVMQV
CCCCCCCCCCCCCHHHCCCCCCCCCCCCCEECHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SQNAPVQSAPHGAARPTGETDNDHSKSMVSHVLGDTEDTWSQLFKQAGRAYQPPKLVLFR
HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHH
QGIRSGCGDATSAVGPFYCPADTKVYLDLGFFDELRRRFGAPGDFAAAYVVAHEVGHHVQ
HHHHHCCCCHHHCCCCEECCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
NLLGVSEKVSRAQAGQSQRVSNALSVKLELQADCLAGVWGHYAQQRGLLERGDLEQALTA
HHHHHHHHHHHHHCCHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHCCCHHHCCHHHHHHH
AHAIGDDTLQRNAGRSVAPDAFTHGTSEQRMHWFRQGFDGGDIRQCDTFRAGADA
HHHHCHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MRWDDMRESENVEDDRASSSGGGFGGGGMRLGVGGIALVAVVGLLMGKNPLEILGMVMQV
CCCCCCCCCCCCCHHHCCCCCCCCCCCCCEECHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SQNAPVQSAPHGAARPTGETDNDHSKSMVSHVLGDTEDTWSQLFKQAGRAYQPPKLVLFR
HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHH
QGIRSGCGDATSAVGPFYCPADTKVYLDLGFFDELRRRFGAPGDFAAAYVVAHEVGHHVQ
HHHHHCCCCHHHCCCCEECCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
NLLGVSEKVSRAQAGQSQRVSNALSVKLELQADCLAGVWGHYAQQRGLLERGDLEQALTA
HHHHHHHHHHHHHCCHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHCCCHHHCCHHHHHHH
AHAIGDDTLQRNAGRSVAPDAFTHGTSEQRMHWFRQGFDGGDIRQCDTFRAGADA
HHHHCHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]