| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is ascD [H]
Identifier: 17547153
GI number: 17547153
Start: 2640041
End: 2641090
Strand: Direct
Name: ascD [H]
Synonym: RSc2434
Alternate gene names: 17547153
Gene position: 2640041-2641090 (Clockwise)
Preceding gene: 17547150
Following gene: 17547154
Centisome position: 71.04
GC content: 68.57
Gene sequence:
>1050_bases ATGGCTTATCAGATCAACGTGTTGCCCAGCGGCCGCCAATTCCAGGCCGAAGATGGTGAGACCATCCTGGCCGCTGCGCT GCGCCAGGGCATCGGCCTGCCGTACGGTTGCAAGAATGGCGCCTGCGGCTCGTGCAAGGGCCACGTGCGCGAAGGCTCCA TCGTGCAGGGCAACCACTCGCCCAACGCGCTGACGGCGCAGGAGGCCACCGAAGGCCGCGCGCTGTTCTGCTGCGCGACG CCGGCCTCCGACGTCACCATCGAGGTGCGCGAGGTGCATGGCGCCGGCGACGTGCCCATCAAGAAGATCCCCTGCCGCGT CGCCTCGCTGGAGAAAGCCGCACCCGACGTGACCATCGTCAAGCTGCAGTTGCCCGCCACCGAGCGCATGCAGTTCCTGG CCGGCCAGTATGTCGAATTCATCCTGCGCGACGGCAAGCGCCGCAGCTACTCCCTCGCCAACCCGCCGCACGCCGACGGC CCGGTCGAACTGCACATCCGCCACATGCCGGGCGGCGCGTTCACGGACTACGTCTTCGGCGCCAAGGAAGGCCAGCCGGC GATGAAAGAGCGCGACATCCTGCGCTTTGAAGGCCCGCTGGGCAGTTTCTTCCTGCGCGAAGCCTCCGACAAGCCGATCA TCCTGCTCGCTTCCGGCACCGGCTTTGCCCCCATCAAGGCCATTATCGAGCACGCCGCGTTCGTCGGCATCCAGCGCCCG ATGACGCTGTACTGGGGCGGCCGCCGTCCGCGCGATCTGTACATGCACGCAATGGCCGAGGAATGGACGCGCACCCTGCC GGGCTTCCGGTACGTCCCGGTCATCTCGGACGCGCAGCCCGAAGACGGCTGGACCGGCCGCACCGGCTTCGTCCACCAGG CGGTGGTCGCCGACCACCCGGACCTGTCCGGCCACGAGGTCTACGCCTGCGGCGCCCCGGTGATGGTCAACGCGGCCCGC ACGGACTTCGCCGCCCAGTGCCGCATGCATCCGGATGCGTTTTTCGCCGACGCGTTCACCTCGGAGGCGGACCTGCACCC GGCCGCCTGA
Upstream 100 bases:
>100_bases TTCCGCGTGAGGAAGGGTGACCCGGCAGCCGCCTGGTCCATCATCGGATGTGCCGCAGCGTGGCGACCAGACACTCTTTT CAACATATTTGGATTGTAGT
Downstream 100 bases:
>100_bases GCCCGACCGTTGCGCAAATCCACACGGGGCGAATTTCGTTTTGACTTGAGTGGATATCCGTCTTATTCTTGCGCCCATGA ACCAGGCCCAGCACCTCCGA
Product: CDP-6-deoxy-delta-3,4-glucoseen reductase
Products: NAD(P); FMNH2; 2-octaprenyl-6-hydroxyphenol [C]
Alternate protein names: CDP-6-deoxy-delta-3,4-glucoseen reductase; E3 [H]
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MAYQINVLPSGRQFQAEDGETILAAALRQGIGLPYGCKNGACGSCKGHVREGSIVQGNHSPNALTAQEATEGRALFCCAT PASDVTIEVREVHGAGDVPIKKIPCRVASLEKAAPDVTIVKLQLPATERMQFLAGQYVEFILRDGKRRSYSLANPPHADG PVELHIRHMPGGAFTDYVFGAKEGQPAMKERDILRFEGPLGSFFLREASDKPIILLASGTGFAPIKAIIEHAAFVGIQRP MTLYWGGRRPRDLYMHAMAEEWTRTLPGFRYVPVISDAQPEDGWTGRTGFVHQAVVADHPDLSGHEVYACGAPVMVNAAR TDFAAQCRMHPDAFFADAFTSEADLHPAA
Sequences:
>Translated_349_residues MAYQINVLPSGRQFQAEDGETILAAALRQGIGLPYGCKNGACGSCKGHVREGSIVQGNHSPNALTAQEATEGRALFCCAT PASDVTIEVREVHGAGDVPIKKIPCRVASLEKAAPDVTIVKLQLPATERMQFLAGQYVEFILRDGKRRSYSLANPPHADG PVELHIRHMPGGAFTDYVFGAKEGQPAMKERDILRFEGPLGSFFLREASDKPIILLASGTGFAPIKAIIEHAAFVGIQRP MTLYWGGRRPRDLYMHAMAEEWTRTLPGFRYVPVISDAQPEDGWTGRTGFVHQAVVADHPDLSGHEVYACGAPVMVNAAR TDFAAQCRMHPDAFFADAFTSEADLHPAA >Mature_348_residues AYQINVLPSGRQFQAEDGETILAAALRQGIGLPYGCKNGACGSCKGHVREGSIVQGNHSPNALTAQEATEGRALFCCATP ASDVTIEVREVHGAGDVPIKKIPCRVASLEKAAPDVTIVKLQLPATERMQFLAGQYVEFILRDGKRRSYSLANPPHADGP VELHIRHMPGGAFTDYVFGAKEGQPAMKERDILRFEGPLGSFFLREASDKPIILLASGTGFAPIKAIIEHAAFVGIQRPM TLYWGGRRPRDLYMHAMAEEWTRTLPGFRYVPVISDAQPEDGWTGRTGFVHQAVVADHPDLSGHEVYACGAPVMVNAART DFAAQCRMHPDAFFADAFTSEADLHPAA
Specific function: Participates in the conversion of CDP-6-deoxy-D-glycero- L-threo-4-hexulose to 3,6-dideoxy-D-glycero-D-glycero-4-hexulose together with CDP-6-deoxy-D-glycero-L-threo-4-hexulose-3-dehydrase (E1) in two consecutive steps. The detailed mechanism of E3 is not
COG id: COG0543
COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Escherichia coli, GI2367314, Length=240, Percent_Identity=32.9166666666667, Blast_Score=131, Evalue=5e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR017927 - InterPro: IPR001041 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR001221 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]
EC number: 1.5.1.29 [C]
Molecular weight: Translated: 37837; Mature: 37706
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYQINVLPSGRQFQAEDGETILAAALRQGIGLPYGCKNGACGSCKGHVREGSIVQGNHS CEEEEEECCCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC PNALTAQEATEGRALFCCATPASDVTIEVREVHGAGDVPIKKIPCRVASLEKAAPDVTIV CCCEEHHHCCCCCEEEEEECCCCCEEEEEEEECCCCCCCHHHCCCHHHHHHHCCCCEEEE KLQLPATERMQFLAGQYVEFILRDGKRRSYSLANPPHADGPVELHIRHMPGGAFTDYVFG EEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHEEC AKEGQPAMKERDILRFEGPLGSFFLREASDKPIILLASGTGFAPIKAIIEHAAFVGIQRP CCCCCCCHHHCCEEEECCCCCHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCC MTLYWGGRRPRDLYMHAMAEEWTRTLPGFRYVPVISDAQPEDGWTGRTGFVHQAVVADHP EEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEEHECCCC DLSGHEVYACGAPVMVNAARTDFAAQCRMHPDAFFADAFTSEADLHPAA CCCCCEEEEECCCEEEEECCCCHHHHHCCCCCHHHHHHHCCCCCCCCCC >Mature Secondary Structure AYQINVLPSGRQFQAEDGETILAAALRQGIGLPYGCKNGACGSCKGHVREGSIVQGNHS EEEEEECCCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC PNALTAQEATEGRALFCCATPASDVTIEVREVHGAGDVPIKKIPCRVASLEKAAPDVTIV CCCEEHHHCCCCCEEEEEECCCCCEEEEEEEECCCCCCCHHHCCCHHHHHHHCCCCEEEE KLQLPATERMQFLAGQYVEFILRDGKRRSYSLANPPHADGPVELHIRHMPGGAFTDYVFG EEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHEEC AKEGQPAMKERDILRFEGPLGSFFLREASDKPIILLASGTGFAPIKAIIEHAAFVGIQRP CCCCCCCHHHCCEEEECCCCCHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCC MTLYWGGRRPRDLYMHAMAEEWTRTLPGFRYVPVISDAQPEDGWTGRTGFVHQAVVADHP EEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEEHECCCC DLSGHEVYACGAPVMVNAARTDFAAQCRMHPDAFFADAFTSEADLHPAA CCCCCEEEEECCCEEEEECCCCHHHHHCCCCCHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NAD(P)H2; FMN [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NAD(P)H2; FMN; 2 2-octaprenylphenol; O2 [C]
Specific reaction: NAD(P)H2 + FMN = NAD(P) + FMNH2 2 2-octaprenylphenol + O2 = 2 2-octaprenyl-6-hydroxyphenol [C]
General reaction: Oxidoreductases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10931327; 11586360; 12142430 [H]