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The map label for this gene is tISRso11a [C]

Identifier: 17547128

GI number: 17547128

Start: 2614086

End: 2614619

Strand: Reverse

Name: tISRso11a [C]

Synonym: RSc2409

Alternate gene names: 17547128

Gene position: 2614619-2614086 (Counterclockwise)

Preceding gene: 17547129

Following gene: 17547127

Centisome position: 70.35

GC content: 59.93

Gene sequence:

>534_bases
ATGGCGAAGTATGAAGAGGCGTTCAAGCGCCAAGTAGTTCAGGAGTATTTGAGGGGGGCCGTTGGGACCGCAGGGCTGAG
CCAGAAGTACGGGATAGGCCGTTCTGTGATCCGGCGCTGGATCAACGCGTGGCAGCGCCATGGGAAATCCGGACTACGCA
AGAAGCATGAAGCGTATAGCGCCGAGTTCAAGCTGACGGTGCTGCAGCGCATGTGGCGCGACGAGTTGTCCTATCAGCAA
GTCAGCGCTGTGTTCGATTTGCGTGAGGCTGGCGGCGTCAGCCGCTGGGACCGCCAGTATCATGAGGGCGGTTTCGACGC
CCTACAGCCGCGCCGCAAAGGCGGGGCACCCATCATGTCCCAGTCCAAGCAAGATCCCCAACCCGCTGCGCAGCCGGCTC
AAGACGAGCGCTCGCGCGAGGATTTGCTCAAAGAGAACGAGTGTTTGCGCGCGGAGGTGGCGTACCTAAAAAAGTTAGAT
GCCCTGCTGCGTGCCAAACAGCAGCAGGCACCAAAGAAAAAGCGCAAGTCGTGA

Upstream 100 bases:

>100_bases
TCGCGGCAACGAGAGCTGAGTCAACAACAGGGAAAAAGGCCGGTCGCCGTGAACTGCACCCCAAAAGTTGGACATCTGTT
CAACCTTTGGGGTGTTTTTC

Downstream 100 bases:

>100_bases
GTGCGCTGCGTGAGCGGCATTCATTGTCGAGCTTGCTCAAGGCCGCGAATCTCGCACGCAGCACGTACTACTACCAGATG
GCGACAGGCCAGGCAGAGGA

Product: ISRSO11-transposase orfA protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MAKYEEAFKRQVVQEYLRGAVGTAGLSQKYGIGRSVIRRWINAWQRHGKSGLRKKHEAYSAEFKLTVLQRMWRDELSYQQ
VSAVFDLREAGGVSRWDRQYHEGGFDALQPRRKGGAPIMSQSKQDPQPAAQPAQDERSREDLLKENECLRAEVAYLKKLD
ALLRAKQQQAPKKKRKS

Sequences:

>Translated_177_residues
MAKYEEAFKRQVVQEYLRGAVGTAGLSQKYGIGRSVIRRWINAWQRHGKSGLRKKHEAYSAEFKLTVLQRMWRDELSYQQ
VSAVFDLREAGGVSRWDRQYHEGGFDALQPRRKGGAPIMSQSKQDPQPAAQPAQDERSREDLLKENECLRAEVAYLKKLD
ALLRAKQQQAPKKKRKS
>Mature_176_residues
AKYEEAFKRQVVQEYLRGAVGTAGLSQKYGIGRSVIRRWINAWQRHGKSGLRKKHEAYSAEFKLTVLQRMWRDELSYQQV
SAVFDLREAGGVSRWDRQYHEGGFDALQPRRKGGAPIMSQSKQDPQPAAQPAQDERSREDLLKENECLRAEVAYLKKLDA
LLRAKQQQAPKKKRKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS150/IS1296 orfA family [H]

Homologues:

Organism=Escherichia coli, GI1789980, Length=168, Percent_Identity=30.952380952381, Blast_Score=74, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20432; Mature: 20300

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKYEEAFKRQVVQEYLRGAVGTAGLSQKYGIGRSVIRRWINAWQRHGKSGLRKKHEAYS
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEFKLTVLQRMWRDELSYQQVSAVFDLREAGGVSRWDRQYHEGGFDALQPRRKGGAPIMS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHCCHHCCCCCCCC
QSKQDPQPAAQPAQDERSREDLLKENECLRAEVAYLKKLDALLRAKQQQAPKKKRKS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCC
>Mature Secondary Structure 
AKYEEAFKRQVVQEYLRGAVGTAGLSQKYGIGRSVIRRWINAWQRHGKSGLRKKHEAYS
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEFKLTVLQRMWRDELSYQQVSAVFDLREAGGVSRWDRQYHEGGFDALQPRRKGGAPIMS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHCCHHCCCCCCCC
QSKQDPQPAAQPAQDERSREDLLKENECLRAEVAYLKKLDALLRAKQQQAPKKKRKS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]