| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17547096
Identifier: 17547096
GI number: 17547096
Start: 2581896
End: 2582465
Strand: Reverse
Name: 17547096
Synonym: RSc2377
Alternate gene names: NA
Gene position: 2582465-2581896 (Counterclockwise)
Preceding gene: 17547097
Following gene: 17547095
Centisome position: 69.49
GC content: 71.75
Gene sequence:
>570_bases ATGAGCGAGTCGTCCTTCCTGTTCCGCTGGTCGCGCCGCAAGGCCGCCGACCGGCGCGGCGAGCCGGAACCCGAACCGGC GCCGCCGGCCGATGTGCCGGCTGCCGGTGTGGTCGCGCCCGAGCCCGCGCCGGCTGCCGAACCGGTCCCCGAGGCCCCGC CGCCCACGCTTGAAGATGCCGCCAAGCTGACCCCCGCCGACGATTTCGCGCCCTTCGTCGCACGTGGCGTGGACGAGGCC GTCAAGCGCGCCGCGCTCAAGAAGCTGTTTGCCGATCCGCGCTTCAACGTGATGGACGGGCTCGATACCTATATCGACGA CTATTCGCAGCCCGACCCGATTCCGCCCGCGATGCTGCGGGAACTGCGGCAGGCGGCGGAACTGCGTCTGTTCGAGACGC TCGACGAGGCGGGTGCGGAACCGGTGGTATTCGAAGCGGGAAACGCGCCCGAAGCGCCGGCCGCCACGGCGGACGAGGCG CCCGTCCAGCCGGCGCCGCCACCGGCCGCGCCGGATGCGTCCGCCCAGGCAACCCCGCATAGCGACGGCAAACCGTCCTC CGTAGAATAG
Upstream 100 bases:
>100_bases GCAGAACTACCGGCCGGAGCCGAAGAAGCGGCGGCGGCCGGAGTCGTTCCTGTCGCCGGAAGACCGCGCGAAATATTGAG AGACCGAGGCGGGAGCCGCC
Downstream 100 bases:
>100_bases AGGCGAGGACCGCGCGGCCATGACCGCGCGGCCGTGTGTGTCCCCACAGCCCGCGCAGCCGGCGCGGGCACCCATGCGCA ACCTCCATGCCCACGCTGGT
Product: proline rich protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MSESSFLFRWSRRKAADRRGEPEPEPAPPADVPAAGVVAPEPAPAAEPVPEAPPPTLEDAAKLTPADDFAPFVARGVDEA VKRAALKKLFADPRFNVMDGLDTYIDDYSQPDPIPPAMLRELRQAAELRLFETLDEAGAEPVVFEAGNAPEAPAATADEA PVQPAPPPAAPDASAQATPHSDGKPSSVE
Sequences:
>Translated_189_residues MSESSFLFRWSRRKAADRRGEPEPEPAPPADVPAAGVVAPEPAPAAEPVPEAPPPTLEDAAKLTPADDFAPFVARGVDEA VKRAALKKLFADPRFNVMDGLDTYIDDYSQPDPIPPAMLRELRQAAELRLFETLDEAGAEPVVFEAGNAPEAPAATADEA PVQPAPPPAAPDASAQATPHSDGKPSSVE >Mature_188_residues SESSFLFRWSRRKAADRRGEPEPEPAPPADVPAAGVVAPEPAPAAEPVPEAPPPTLEDAAKLTPADDFAPFVARGVDEAV KRAALKKLFADPRFNVMDGLDTYIDDYSQPDPIPPAMLRELRQAAELRLFETLDEAGAEPVVFEAGNAPEAPAATADEAP VQPAPPPAAPDASAQATPHSDGKPSSVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19891; Mature: 19760
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESSFLFRWSRRKAADRRGEPEPEPAPPADVPAAGVVAPEPAPAAEPVPEAPPPTLEDA CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH AKLTPADDFAPFVARGVDEAVKRAALKKLFADPRFNVMDGLDTYIDDYSQPDPIPPAMLR HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHH ELRQAAELRLFETLDEAGAEPVVFEAGNAPEAPAATADEAPVQPAPPPAAPDASAQATPH HHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SDGKPSSVE CCCCCCCCC >Mature Secondary Structure SESSFLFRWSRRKAADRRGEPEPEPAPPADVPAAGVVAPEPAPAAEPVPEAPPPTLEDA CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH AKLTPADDFAPFVARGVDEAVKRAALKKLFADPRFNVMDGLDTYIDDYSQPDPIPPAMLR HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHH ELRQAAELRLFETLDEAGAEPVVFEAGNAPEAPAATADEAPVQPAPPPAAPDASAQATPH HHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SDGKPSSVE CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA