Click here to switch to the map view.

The map label for this gene is 17547055

Identifier: 17547055

GI number: 17547055

Start: 2533797

End: 2534570

Strand: Reverse

Name: 17547055

Synonym: RSc2336

Alternate gene names: NA

Gene position: 2534570-2533797 (Counterclockwise)

Preceding gene: 17547056

Following gene: 17547054

Centisome position: 68.2

GC content: 61.24

Gene sequence:

>774_bases
GTGTCCCACTTTTTGTGGATCACCACCTTGCACCTGCCTTCGCACCTCGCCAAATCACGCCACGGCGTCTTCTACTTCCG
CCTGACCTTCCGCACCGGAGGCGTCACCACCGAGCGGCGGATATCTTTGCGCACGAAAAATCCGCAGGAAGCCCGCTTCA
AAGCCCTATGCCTCTCAGGGATAATGGCTGTTCGCAAACAAGAACAGCAACGGGGCGCGGCCTTGGACTACCTCAGCACG
GCAGGGAATATTGCAGGCCAGCGGCCCGATAGCGACTTTCTTCTGAACCTGCTGCACCGCGTAGATCGTCAGCGCTTGGC
GGAACTGGCCGGGCTGTCCTTGGAGGCCGTCAACGAGCTTTTGACGCCGATGGCAGAGCCAGACACCCGCAGGCTGGATA
TTGAAATGCCGGGCGGCTTTGCCATTCGCAACGTCAACAGCGACGAGGACATGGGCCGGGCGGTTCATATCCTCAAGGCG
CTGAACCTGTCGCCCGAAGCGCTGGCGGCACTGATTACCAGCAACCCCAACCCTGCACAGGCGGCCCCTGTTCCTGCCTC
ACCGCCCGCAGCGCCGCAAGCCGACACCACGGAAGCAGGCGGCACCACCATTCAGGAAATGGTGCCGAGGTTCAGGGCCA
GCAAGAAGCTTGACCCCCAACGGCTGAGGCATTTTTCGGACGAGCACTTGTCCGTTCTGGCCGCGTTGCTTCAATGCGAT
TGGCTTGCCACCTGGAACGGCCCCCAGAATCCCCGGACACAGTCACCCACTTAA

Upstream 100 bases:

>100_bases
TACCGTGGGTTCGAATCCCACCCTCTCCGCCAAAATGAACTAAGCCCTTGATTCGTCAAGGGCTTTTTTCTTTGGTTCAC
GCGACAGGTGTCACAGACCG

Downstream 100 bases:

>100_bases
ACTACGGGTAGGCATACGACTGTGTTTATGACTAGCAGCAACCAAGAAGTGATGGAAGTGTTGACGGGCCCGGAGCGTCG
CCGGCGGTGGTCGGTGGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MSHFLWITTLHLPSHLAKSRHGVFYFRLTFRTGGVTTERRISLRTKNPQEARFKALCLSGIMAVRKQEQQRGAALDYLST
AGNIAGQRPDSDFLLNLLHRVDRQRLAELAGLSLEAVNELLTPMAEPDTRRLDIEMPGGFAIRNVNSDEDMGRAVHILKA
LNLSPEALAALITSNPNPAQAAPVPASPPAAPQADTTEAGGTTIQEMVPRFRASKKLDPQRLRHFSDEHLSVLAALLQCD
WLATWNGPQNPRTQSPT

Sequences:

>Translated_257_residues
MSHFLWITTLHLPSHLAKSRHGVFYFRLTFRTGGVTTERRISLRTKNPQEARFKALCLSGIMAVRKQEQQRGAALDYLST
AGNIAGQRPDSDFLLNLLHRVDRQRLAELAGLSLEAVNELLTPMAEPDTRRLDIEMPGGFAIRNVNSDEDMGRAVHILKA
LNLSPEALAALITSNPNPAQAAPVPASPPAAPQADTTEAGGTTIQEMVPRFRASKKLDPQRLRHFSDEHLSVLAALLQCD
WLATWNGPQNPRTQSPT
>Mature_256_residues
SHFLWITTLHLPSHLAKSRHGVFYFRLTFRTGGVTTERRISLRTKNPQEARFKALCLSGIMAVRKQEQQRGAALDYLSTA
GNIAGQRPDSDFLLNLLHRVDRQRLAELAGLSLEAVNELLTPMAEPDTRRLDIEMPGGFAIRNVNSDEDMGRAVHILKAL
NLSPEALAALITSNPNPAQAAPVPASPPAAPQADTTEAGGTTIQEMVPRFRASKKLDPQRLRHFSDEHLSVLAALLQCDW
LATWNGPQNPRTQSPT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28366; Mature: 28235

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHFLWITTLHLPSHLAKSRHGVFYFRLTFRTGGVTTERRISLRTKNPQEARFKALCLSG
CCCEEEEEEEHHHHHHHHCCCCEEEEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHH
IMAVRKQEQQRGAALDYLSTAGNIAGQRPDSDFLLNLLHRVDRQRLAELAGLSLEAVNEL
HHHHHHHHHHHCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LTPMAEPDTRRLDIEMPGGFAIRNVNSDEDMGRAVHILKALNLSPEALAALITSNPNPAQ
HCCCCCCCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC
AAPVPASPPAAPQADTTEAGGTTIQEMVPRFRASKKLDPQRLRHFSDEHLSVLAALLQCD
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHC
WLATWNGPQNPRTQSPT
CEEECCCCCCCCCCCCC
>Mature Secondary Structure 
SHFLWITTLHLPSHLAKSRHGVFYFRLTFRTGGVTTERRISLRTKNPQEARFKALCLSG
CCEEEEEEEHHHHHHHHCCCCEEEEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHH
IMAVRKQEQQRGAALDYLSTAGNIAGQRPDSDFLLNLLHRVDRQRLAELAGLSLEAVNEL
HHHHHHHHHHHCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LTPMAEPDTRRLDIEMPGGFAIRNVNSDEDMGRAVHILKALNLSPEALAALITSNPNPAQ
HCCCCCCCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC
AAPVPASPPAAPQADTTEAGGTTIQEMVPRFRASKKLDPQRLRHFSDEHLSVLAALLQCD
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHC
WLATWNGPQNPRTQSPT
CEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA