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The map label for this gene is tISRso10a [C]

Identifier: 17547051

GI number: 17547051

Start: 2531312

End: 2531578

Strand: Reverse

Name: tISRso10a [C]

Synonym: RSc2332

Alternate gene names: 17547051

Gene position: 2531578-2531312 (Counterclockwise)

Preceding gene: 17547054

Following gene: 17547050

Centisome position: 68.12

GC content: 62.55

Gene sequence:

>267_bases
GTGACAGCGCGCCAGCACGGCGTGAATCCGAATCAGGTGTTCCAGTGGCGCAAGCTGTACCAAGACGGGAGCCTGTCGGC
AGTGACCGCGGGCGAGGAAGTGGTGCCGGCCTCGGAGCTGGCCGAAGCGCTCAAACAAGTCCGTGAGCTGCAGCGCATGC
TCGGCAAGAAGACGATGGAGAACGAGATTCTTCGCGAAGCCGTGGAATACGGTCGGGCAAAAAAGTGGATAGCGCGCTCG
CCATCGTTGCCGGGGGACGACCAGTGA

Upstream 100 bases:

>100_bases
ATGTAATCCTCGTAGCTGATCACGGGCGCCCAAAAAGGACGACCCTACAACGAGGTGTATCAATTCCAAAGTGCGTCCGC
GTATCAATTTACAACTGCGT

Downstream 100 bases:

>100_bases
AGCTAGTTTGCGAGGTCCTCGGCGTAGCGCGCTCAAACGTGGCGGCCAAGCGGGCCCGGCCGGGTGATTGGCGCGACGGG
CGCACAGCTCGGCAAACCGA

Product: ISRSO10-transposase ORFA protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MTARQHGVNPNQVFQWRKLYQDGSLSAVTAGEEVVPASELAEALKQVRELQRMLGKKTMENEILREAVEYGRAKKWIARS
PSLPGDDQ

Sequences:

>Translated_88_residues
MTARQHGVNPNQVFQWRKLYQDGSLSAVTAGEEVVPASELAEALKQVRELQRMLGKKTMENEILREAVEYGRAKKWIARS
PSLPGDDQ
>Mature_87_residues
TARQHGVNPNQVFQWRKLYQDGSLSAVTAGEEVVPASELAEALKQVRELQRMLGKKTMENEILREAVEYGRAKKWIARSP
SLPGDDQ

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI145693215, Length=88, Percent_Identity=72.7272727272727, Blast_Score=139, Evalue=2e-35,
Organism=Escherichia coli, GI145693180, Length=88, Percent_Identity=72.7272727272727, Blast_Score=139, Evalue=2e-35,
Organism=Escherichia coli, GI145693177, Length=88, Percent_Identity=72.7272727272727, Blast_Score=139, Evalue=2e-35,
Organism=Escherichia coli, GI145693154, Length=88, Percent_Identity=72.7272727272727, Blast_Score=139, Evalue=2e-35,
Organism=Escherichia coli, GI145693126, Length=88, Percent_Identity=72.7272727272727, Blast_Score=139, Evalue=2e-35,
Organism=Escherichia coli, GI145693097, Length=88, Percent_Identity=72.7272727272727, Blast_Score=139, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR002514 [H]

Pfam domain/function: PF00665 rve; PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 9938; Mature: 9807

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARQHGVNPNQVFQWRKLYQDGSLSAVTAGEEVVPASELAEALKQVRELQRMLGKKTME
CCCCCCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
NEILREAVEYGRAKKWIARSPSLPGDDQ
HHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TARQHGVNPNQVFQWRKLYQDGSLSAVTAGEEVVPASELAEALKQVRELQRMLGKKTME
CCCCCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
NEILREAVEYGRAKKWIARSPSLPGDDQ
HHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA