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The map label for this gene is tISRso10b [C]

Identifier: 17547050

GI number: 17547050

Start: 2530467

End: 2531354

Strand: Reverse

Name: tISRso10b [C]

Synonym: RSc2331

Alternate gene names: 17547050

Gene position: 2531354-2530467 (Counterclockwise)

Preceding gene: 17547051

Following gene: 17547049

Centisome position: 68.11

GC content: 64.3

Gene sequence:

>888_bases
GTGGATAGCGCGCTCGCCATCGTTGCCGGGGGACGACCAGTGAAGCTAGTTTGCGAGGTCCTCGGCGTAGCGCGCTCAAA
CGTGGCGGCCAAGCGGGCCCGGCCGGGTGATTGGCGCGACGGGCGCACAGCTCGGCAAACCGACGACGCTAGCTTGGTCG
ACGAAATCCGGCGCACCATCGCCGACTTGCCGAGCTATGGCTACCGGCGGGTCTGGGGCAGATTGCGGCGCGAACGTGAG
CGTCAATGCGAAGCGCCGATCAATGCCAAGCGTGTCTATCGGGTCATGCGTGTGCACAGCTTGCTGCTTGAGCGCAGGCC
GACGCCACCGCGTCCACCGCGCCGGCATGACGGCAAGGTCGCCGTGGCCAAGAGCAACCAGCGCTGGTGCTCCGATGGCT
TCGAGTTCCGCTGCGACAACGGCGAGCCGCTGCGGGTGACGTTCGCGCTGGATTGCTGCGACCGCGAGGCGATGAGCTGG
GTGGCGACGACCGGCGGCTACAGCGGCGACGTAGTACGCGACGTGATGCTGGCGGCCGTCGAGCAGCGCTTCGGCAATGT
TCCGAAAGCGCCAGCGGAAATTGAATGGCTGACGGACAACGGCTCAGGCTACATTGCTGGGAAGACTCGCGAGTTCGCCA
CGGACATTGGCTTGAAGCCATTGACGACACCGGTTTGCAGCCCGCAGAGCAACGGCATGGCCGAGAGCTTCGTGAAGACG
ATGAAGCGCGACTACGTCGCCTTCATGCCCAAGCCTGACGCGGCCACAGCGACGCGCAACCTCGCCATCGCGTTCGAGCA
TTACAACGAGCAGCATCCCCATAGCGCACTGAAATATCGCTCGCCACGCGAGTTCAGGCGCAGGACGGAATCATCAACTC
AAGTGTGA

Upstream 100 bases:

>100_bases
AAGCGCTCAAACAAGTCCGTGAGCTGCAGCGCATGCTCGGCAAGAAGACGATGGAGAACGAGATTCTTCGCGAAGCCGTG
GAATACGGTCGGGCAAAAAA

Downstream 100 bases:

>100_bases
GGCGGTGTCCGGAGATGCGGGGGCAAATCCACCACCAAGGATGACGACTCCAAGGAGACGATGGCGTTTGTCGCATATCG
ACACTTTGCCGATTTTGAGA

Product: ISRSO10-transposase ORFB protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MDSALAIVAGGRPVKLVCEVLGVARSNVAAKRARPGDWRDGRTARQTDDASLVDEIRRTIADLPSYGYRRVWGRLRRERE
RQCEAPINAKRVYRVMRVHSLLLERRPTPPRPPRRHDGKVAVAKSNQRWCSDGFEFRCDNGEPLRVTFALDCCDREAMSW
VATTGGYSGDVVRDVMLAAVEQRFGNVPKAPAEIEWLTDNGSGYIAGKTREFATDIGLKPLTTPVCSPQSNGMAESFVKT
MKRDYVAFMPKPDAATATRNLAIAFEHYNEQHPHSALKYRSPREFRRRTESSTQV

Sequences:

>Translated_295_residues
MDSALAIVAGGRPVKLVCEVLGVARSNVAAKRARPGDWRDGRTARQTDDASLVDEIRRTIADLPSYGYRRVWGRLRRERE
RQCEAPINAKRVYRVMRVHSLLLERRPTPPRPPRRHDGKVAVAKSNQRWCSDGFEFRCDNGEPLRVTFALDCCDREAMSW
VATTGGYSGDVVRDVMLAAVEQRFGNVPKAPAEIEWLTDNGSGYIAGKTREFATDIGLKPLTTPVCSPQSNGMAESFVKT
MKRDYVAFMPKPDAATATRNLAIAFEHYNEQHPHSALKYRSPREFRRRTESSTQV
>Mature_295_residues
MDSALAIVAGGRPVKLVCEVLGVARSNVAAKRARPGDWRDGRTARQTDDASLVDEIRRTIADLPSYGYRRVWGRLRRERE
RQCEAPINAKRVYRVMRVHSLLLERRPTPPRPPRRHDGKVAVAKSNQRWCSDGFEFRCDNGEPLRVTFALDCCDREAMSW
VATTGGYSGDVVRDVMLAAVEQRFGNVPKAPAEIEWLTDNGSGYIAGKTREFATDIGLKPLTTPVCSPQSNGMAESFVKT
MKRDYVAFMPKPDAATATRNLAIAFEHYNEQHPHSALKYRSPREFRRRTESSTQV

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1790724, Length=289, Percent_Identity=60.8996539792388, Blast_Score=357, Evalue=1e-100,
Organism=Escherichia coli, GI1789424, Length=289, Percent_Identity=60.8996539792388, Blast_Score=357, Evalue=1e-100,
Organism=Escherichia coli, GI1789224, Length=289, Percent_Identity=60.8996539792388, Blast_Score=357, Evalue=1e-100,
Organism=Escherichia coli, GI1788305, Length=289, Percent_Identity=60.8996539792388, Blast_Score=357, Evalue=1e-100,
Organism=Escherichia coli, GI1787669, Length=289, Percent_Identity=60.8996539792388, Blast_Score=357, Evalue=1e-100,
Organism=Escherichia coli, GI1786558, Length=289, Percent_Identity=60.8996539792388, Blast_Score=357, Evalue=1e-100,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR002514 [H]

Pfam domain/function: PF00665 rve; PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 33238; Mature: 33238

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSALAIVAGGRPVKLVCEVLGVARSNVAAKRARPGDWRDGRTARQTDDASLVDEIRRTI
CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
ADLPSYGYRRVWGRLRRERERQCEAPINAKRVYRVMRVHSLLLERRPTPPRPPRRHDGKV
HHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE
AVAKSNQRWCSDGFEFRCDNGEPLRVTFALDCCDREAMSWVATTGGYSGDVVRDVMLAAV
EEEECCCCHHCCCCEEEECCCCEEEEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHH
EQRFGNVPKAPAEIEWLTDNGSGYIAGKTREFATDIGLKPLTTPVCSPQSNGMAESFVKT
HHHHCCCCCCCCEEEEEEECCCEEEECCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
MKRDYVAFMPKPDAATATRNLAIAFEHYNEQHPHSALKYRSPREFRRRTESSTQV
HHHHHEEECCCCCCHHHHHHEEEEEECCCCCCCHHHHHCCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MDSALAIVAGGRPVKLVCEVLGVARSNVAAKRARPGDWRDGRTARQTDDASLVDEIRRTI
CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
ADLPSYGYRRVWGRLRRERERQCEAPINAKRVYRVMRVHSLLLERRPTPPRPPRRHDGKV
HHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE
AVAKSNQRWCSDGFEFRCDNGEPLRVTFALDCCDREAMSWVATTGGYSGDVVRDVMLAAV
EEEECCCCHHCCCCEEEECCCCEEEEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHH
EQRFGNVPKAPAEIEWLTDNGSGYIAGKTREFATDIGLKPLTTPVCSPQSNGMAESFVKT
HHHHCCCCCCCCEEEEEEECCCEEEECCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
MKRDYVAFMPKPDAATATRNLAIAFEHYNEQHPHSALKYRSPREFRRRTESSTQV
HHHHHEEECCCCCCHHHHHHEEEEEECCCCCCCHHHHHCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA