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The map label for this gene is yiaT [C]

Identifier: 17547003

GI number: 17547003

Start: 2477832

End: 2478659

Strand: Direct

Name: yiaT [C]

Synonym: RSc2284

Alternate gene names: 17547003

Gene position: 2477832-2478659 (Clockwise)

Preceding gene: 17546999

Following gene: 17547004

Centisome position: 66.67

GC content: 69.57

Gene sequence:

>828_bases
ATGCGCCCCGACGCCGCAGACACCATGCCCGTGCCCACTTCCTCCATCCTGCGCGCGTTGCCGCTCGTCTGCCTGCTCGC
CTGTGGACTGACCGCGGGGCCCGCGGCGCACGCCAACACCGGCAACGACGACACCGCGAGTGACTGGAGCATCGCCATCG
GCCCGTCCGTGTACGTGACGCCCAAGTATCCCGGCGCACGTTCGAGCTTCGTCTTCCCGTGGGTGGACCAGGAGATCGAG
TACCGGCACCGGTTCTTCTCGAAGGGCACGGACTTCCTAGGCGCCTATCTCGTCAACGACGACACCTGGCAGGTCGGCGG
CAACTTCCAGCTCGATCCGACCTGGCGCCACGCGAGCGACGATGCGCGGCTGGCCGGCCTCGGCAACGTCAATGCCACGG
TGCGCGCCAAGGTATTCGCGCAGTACACCGTGTCGTTCCTGACGCTGTCCACCGATGCCGAGCAGGACATCCTCGGCAAC
CGCCAGGGCCTGATCGTCAACGGCGACGTCTACGCCAGCGCGCCGGTGGGCCGCTGGCTGTTCAGCCTCGGCGCCGGACT
GAGTTGGGTCAACCGCCAGTACATGGGCACCTTCTTCGGCGTCGATGCGGACCAGAGCGCCCGCTCCGGCCTGCCCGCCT
TCGCCGCGCGCGCCGGCGTGCGCGACCGCCACCTCAACGCCATCGTCACCTGCAAGCTGGACGACCGCTGGACTGCGAGC
GGCTCCGTCACCCTCGCCCGCCTGCGCGGCGATGCCGCCGACAGCCCGATCACCCAGCGCCGCCAGCAGACCACGGCGAT
GGCGTCCGTGACGTACCGCTTCCGCTAG

Upstream 100 bases:

>100_bases
CGCCAGCGTGGAGGCCGGGCGGGTGCCGACATGCATGACAAATGCGACGGGCCGCCATGCGGCGCCGCCCGCGATTCCTC
TAAAATGCCGTGTCCTTCTC

Downstream 100 bases:

>100_bases
TCCTGCCTCCCGCTTCCCATCCCCGTTCAGCGGATCGCGGGCAGCGCGATCGCCCGCGCAGCCCCATGGCGCGCTGAGCA
AAGTTGAAATTCCGGCCGCG

Product: transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MRPDAADTMPVPTSSILRALPLVCLLACGLTAGPAAHANTGNDDTASDWSIAIGPSVYVTPKYPGARSSFVFPWVDQEIE
YRHRFFSKGTDFLGAYLVNDDTWQVGGNFQLDPTWRHASDDARLAGLGNVNATVRAKVFAQYTVSFLTLSTDAEQDILGN
RQGLIVNGDVYASAPVGRWLFSLGAGLSWVNRQYMGTFFGVDADQSARSGLPAFAARAGVRDRHLNAIVTCKLDDRWTAS
GSVTLARLRGDAADSPITQRRQQTTAMASVTYRFR

Sequences:

>Translated_275_residues
MRPDAADTMPVPTSSILRALPLVCLLACGLTAGPAAHANTGNDDTASDWSIAIGPSVYVTPKYPGARSSFVFPWVDQEIE
YRHRFFSKGTDFLGAYLVNDDTWQVGGNFQLDPTWRHASDDARLAGLGNVNATVRAKVFAQYTVSFLTLSTDAEQDILGN
RQGLIVNGDVYASAPVGRWLFSLGAGLSWVNRQYMGTFFGVDADQSARSGLPAFAARAGVRDRHLNAIVTCKLDDRWTAS
GSVTLARLRGDAADSPITQRRQQTTAMASVTYRFR
>Mature_275_residues
MRPDAADTMPVPTSSILRALPLVCLLACGLTAGPAAHANTGNDDTASDWSIAIGPSVYVTPKYPGARSSFVFPWVDQEIE
YRHRFFSKGTDFLGAYLVNDDTWQVGGNFQLDPTWRHASDDARLAGLGNVNATVRAKVFAQYTVSFLTLSTDAEQDILGN
RQGLIVNGDVYASAPVGRWLFSLGAGLSWVNRQYMGTFFGVDADQSARSGLPAFAARAGVRDRHLNAIVTCKLDDRWTAS
GSVTLARLRGDAADSPITQRRQQTTAMASVTYRFR

Specific function: Unknown

COG id: COG3713

COG function: function code M; Outer membrane protein V

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mipA/ompV family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010583 [H]

Pfam domain/function: PF06629 MipA [H]

EC number: NA

Molecular weight: Translated: 29859; Mature: 29859

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPDAADTMPVPTSSILRALPLVCLLACGLTAGPAAHANTGNDDTASDWSIAIGPSVYVT
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEE
PKYPGARSSFVFPWVDQEIEYRHRFFSKGTDFLGAYLVNDDTWQVGGNFQLDPTWRHASD
CCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCEEECCEEEECCCCCCCCC
DARLAGLGNVNATVRAKVFAQYTVSFLTLSTDAEQDILGNRQGLIVNGDVYASAPVGRWL
CCEEEECCCCCCEEEEEHHEEEEEEEEEEECCCCHHHHCCCCCEEEECCEEECCCHHHHH
FSLGAGLSWVNRQYMGTFFGVDADQSARSGLPAFAARAGVRDRHLNAIVTCKLDDRWTAS
HHHCCCHHHHHHHHHHHEECCCCCCHHHCCCCHHHHHCCCCCCCCCEEEEEEECCCEECC
GSVTLARLRGDAADSPITQRRQQTTAMASVTYRFR
CCEEEEEECCCCCCCCHHHHHHHHHHHEEEEEEEC
>Mature Secondary Structure
MRPDAADTMPVPTSSILRALPLVCLLACGLTAGPAAHANTGNDDTASDWSIAIGPSVYVT
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEE
PKYPGARSSFVFPWVDQEIEYRHRFFSKGTDFLGAYLVNDDTWQVGGNFQLDPTWRHASD
CCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCEEECCEEEECCCCCCCCC
DARLAGLGNVNATVRAKVFAQYTVSFLTLSTDAEQDILGNRQGLIVNGDVYASAPVGRWL
CCEEEECCCCCCEEEEEHHEEEEEEEEEEECCCCHHHHCCCCCEEEECCEEECCCHHHHH
FSLGAGLSWVNRQYMGTFFGVDADQSARSGLPAFAARAGVRDRHLNAIVTCKLDDRWTAS
HHHCCCHHHHHHHHHHHEECCCCCCHHHCCCCHHHHHCCCCCCCCCEEEEEEECCCEECC
GSVTLARLRGDAADSPITQRRQQTTAMASVTYRFR
CCEEEEEECCCCCCCCHHHHHHHHHHHEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]