| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is 17546917
Identifier: 17546917
GI number: 17546917
Start: 2379952
End: 2380242
Strand: Direct
Name: 17546917
Synonym: RSc2198
Alternate gene names: NA
Gene position: 2379952-2380242 (Clockwise)
Preceding gene: 17546916
Following gene: 17546921
Centisome position: 64.04
GC content: 65.29
Gene sequence:
>291_bases ATGTCCGAGCAGCCGATGCCGCCCCAAGAGGTCTACGAGGGCTTTGAGATCCACGTCCTGCCGAGCCCGTCGCCGCTCGA CAGCACACGCTACACGTACATCGGTTACGTGTGCCATCCCGGCGCCGATCCGGCCCTGCCTGGGCATACGGTGCCCTTCC ATGCCGACGGAGACGAGCGCTTCCGCAACCCCGAAGACGCCATCGAGGAAGCGCTGCGCGTGGGGCACAGCATCATCGAT GGCACGCACCCGGATCTGTCGGTGCTATCGCTGGTGACACACGGGTACTGA
Upstream 100 bases:
>100_bases CGCATGGCATCGCCTAGAATTTTTCCATCACCCGAACACCACGCCGCGGCGCGCCCGATGCCGTGCGCAGCGGGCACGCC GGTGGCGAAGCGAGATCGCC
Downstream 100 bases:
>100_bases CGCCGTTGCGGCGTCACGTCATGCAACGGCGTCCGACGCTCATTTTTCGCGCGGCAGCCGCCCCAGCAGATAAAACTCGT CATTCGGCCGCATCGAGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MSEQPMPPQEVYEGFEIHVLPSPSPLDSTRYTYIGYVCHPGADPALPGHTVPFHADGDERFRNPEDAIEEALRVGHSIID GTHPDLSVLSLVTHGY
Sequences:
>Translated_96_residues MSEQPMPPQEVYEGFEIHVLPSPSPLDSTRYTYIGYVCHPGADPALPGHTVPFHADGDERFRNPEDAIEEALRVGHSIID GTHPDLSVLSLVTHGY >Mature_95_residues SEQPMPPQEVYEGFEIHVLPSPSPLDSTRYTYIGYVCHPGADPALPGHTVPFHADGDERFRNPEDAIEEALRVGHSIIDG THPDLSVLSLVTHGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10579; Mature: 10448
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQPMPPQEVYEGFEIHVLPSPSPLDSTRYTYIGYVCHPGADPALPGHTVPFHADGDER CCCCCCCHHHHHCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEECCCHHH FRNPEDAIEEALRVGHSIIDGTHPDLSVLSLVTHGY CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC >Mature Secondary Structure SEQPMPPQEVYEGFEIHVLPSPSPLDSTRYTYIGYVCHPGADPALPGHTVPFHADGDER CCCCCCHHHHHCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEECCCHHH FRNPEDAIEEALRVGHSIIDGTHPDLSVLSLVTHGY CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA