BacMap

Definition	Ralstonia solanacearum GMI1000, complete genome.
Accession	NC_003295
Length	3,716,413

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The map label for this gene is fabG [H]

Identifier: 17546905

GI number: 17546905

Start: 2368185

End: 2368976

Strand: Reverse

Name: fabG [H]

Synonym: RSc2186

Alternate gene names: 17546905

Gene position: 2368976-2368185 (Counterclockwise)

Preceding gene: 17546906

Following gene: 17546904

Centisome position: 63.74

GC content: 73.11

Gene sequence:

>792_bases
ATGGATCTGGGCTTGAGGGGCAAGCGCGCACTGGTCTGCGGCGCGAGCAAGGGACTGGGCTTCGCCTGCGCCGATGCGCT
GGCGGCCGAGGGCGTGGACGTGGTGATCGTCGCGCGCGGCGCCGAGGCGCTGCAGGAGGCGGCCGGGCGCATCCGCGGCG
CGCATGGCGTGCGCGTCGAGGCGGTGGTGGCCGACATCGCCACACCGGAAGGCCGCGCCGAAGCGCTGCTGGCCTGCCAG
CGCCTGGGCGGCTCGCCCGACATCCTCGTCACCAACGCGGGCGGCCCGCCGCCGGGCAACTTTCGCGACTGGGGCCGCGA
GGCGTGGCTCGCCGCGCTCGACGCCAACATGCTCACGCCCATCGAGCTGATCAAGGCCACGGTCGACCCGATGATCGAGC
GCGGCTGGGGCCGCATCGTCAATATCACCAGCAGCGCGGTGAAGGCGCCGATCGATGTGCTGGGGCTGTCCAACGGGGCA
CGCTCGGGGCTGACCGGCTTCGTGGCCGGCCTGGCGCGCGAAGTGGCCCGGCACGGCGTGACCGTCAACAACCTGCTGCC
CGGCCCGTTCGAGACCGAGCGCCTGGCCAAGACACTGGAAGCCGGTGCCAGGGCCGCCGGCGTCAGCGCCGAGGCGCACT
ACGCGCGCCGGCGTGAAGCCAACCCCGCCCGGCGTTTCGGCCAGCCGGCCGAGTTCGGCGCCGTGTGCGCGTTCCTGTGC
AGCCGGCAGGCCGGCTACCTGAACGCGCAGAACATCCTGCTGGATGGCGGCGCCTATCCCGGAACGTTCTGA

Upstream 100 bases:

>100_bases
CACGCTGTGGCAGGTCGGCGGCAGTGCGCTGGTGCTGGCCGGGATGGCACTGCTGTCGCGGCGCGGCAATCAATCGAACT
GAGTCGAGGAGGCAGCCGGG

Downstream 100 bases:

>100_bases
GTCCACGACCATGACCACCATCACGCCCGAGGGCCCCGTGCCCAAGCGCCGCCGCATCGCCCTGATCGCGCACGACCACA
AGAAGGACGACATGATCGCC

Product: dehydrogenase/reductase oxidoreductase

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MDLGLRGKRALVCGASKGLGFACADALAAEGVDVVIVARGAEALQEAAGRIRGAHGVRVEAVVADIATPEGRAEALLACQ
RLGGSPDILVTNAGGPPPGNFRDWGREAWLAALDANMLTPIELIKATVDPMIERGWGRIVNITSSAVKAPIDVLGLSNGA
RSGLTGFVAGLAREVARHGVTVNNLLPGPFETERLAKTLEAGARAAGVSAEAHYARRREANPARRFGQPAEFGAVCAFLC
SRQAGYLNAQNILLDGGAYPGTF

Sequences:

>Translated_263_residues
MDLGLRGKRALVCGASKGLGFACADALAAEGVDVVIVARGAEALQEAAGRIRGAHGVRVEAVVADIATPEGRAEALLACQ
RLGGSPDILVTNAGGPPPGNFRDWGREAWLAALDANMLTPIELIKATVDPMIERGWGRIVNITSSAVKAPIDVLGLSNGA
RSGLTGFVAGLAREVARHGVTVNNLLPGPFETERLAKTLEAGARAAGVSAEAHYARRREANPARRFGQPAEFGAVCAFLC
SRQAGYLNAQNILLDGGAYPGTF
>Mature_263_residues
MDLGLRGKRALVCGASKGLGFACADALAAEGVDVVIVARGAEALQEAAGRIRGAHGVRVEAVVADIATPEGRAEALLACQ
RLGGSPDILVTNAGGPPPGNFRDWGREAWLAALDANMLTPIELIKATVDPMIERGWGRIVNITSSAVKAPIDVLGLSNGA
RSGLTGFVAGLAREVARHGVTVNNLLPGPFETERLAKTLEAGARAAGVSAEAHYARRREANPARRFGQPAEFGAVCAFLC
SRQAGYLNAQNILLDGGAYPGTF

Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=255, Percent_Identity=30.9803921568627, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI5031737, Length=253, Percent_Identity=28.0632411067194, Blast_Score=101, Evalue=6e-22,
Organism=Homo sapiens, GI126723750, Length=260, Percent_Identity=28.0769230769231, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI19923817, Length=257, Percent_Identity=26.8482490272374, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI126723191, Length=182, Percent_Identity=32.967032967033, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI33667109, Length=190, Percent_Identity=29.4736842105263, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI226371731, Length=185, Percent_Identity=29.7297297297297, Blast_Score=78, Evalue=7e-15,
Organism=Homo sapiens, GI40254992, Length=246, Percent_Identity=28.0487804878049, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI20149619, Length=209, Percent_Identity=26.7942583732057, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI15277342, Length=273, Percent_Identity=27.1062271062271, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI10190704, Length=260, Percent_Identity=25.7692307692308, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI1787335, Length=262, Percent_Identity=34.7328244274809, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1788459, Length=250, Percent_Identity=30, Blast_Score=98, Evalue=5e-22,
Organism=Escherichia coli, GI1790717, Length=255, Percent_Identity=26.6666666666667, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI87082100, Length=259, Percent_Identity=32.8185328185328, Blast_Score=94, Evalue=7e-21,
Organism=Escherichia coli, GI87082160, Length=262, Percent_Identity=29.0076335877863, Blast_Score=87, Evalue=8e-19,
Organism=Escherichia coli, GI1789208, Length=259, Percent_Identity=27.4131274131274, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787905, Length=257, Percent_Identity=28.0155642023346, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1789378, Length=257, Percent_Identity=26.8482490272374, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17560676, Length=260, Percent_Identity=30, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17559104, Length=267, Percent_Identity=32.9588014981273, Blast_Score=98, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17562910, Length=266, Percent_Identity=30.4511278195489, Blast_Score=96, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17562904, Length=269, Percent_Identity=28.996282527881, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17560220, Length=265, Percent_Identity=29.4339622641509, Blast_Score=91, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI193204405, Length=278, Percent_Identity=29.4964028776978, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17531453, Length=269, Percent_Identity=29.7397769516729, Blast_Score=87, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI17562906, Length=271, Percent_Identity=28.4132841328413, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17560150, Length=266, Percent_Identity=29.3233082706767, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17562990, Length=265, Percent_Identity=28.6792452830189, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17561402, Length=258, Percent_Identity=27.906976744186, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17536025, Length=272, Percent_Identity=29.0441176470588, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17562908, Length=281, Percent_Identity=27.4021352313167, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17565030, Length=258, Percent_Identity=29.0697674418605, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17563726, Length=263, Percent_Identity=26.615969581749, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17536651, Length=258, Percent_Identity=28.6821705426357, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI72000259, Length=263, Percent_Identity=27.7566539923954, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17538486, Length=265, Percent_Identity=29.4339622641509, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17551412, Length=264, Percent_Identity=28.4090909090909, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17560332, Length=270, Percent_Identity=29.2592592592593, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17561272, Length=256, Percent_Identity=29.6875, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71994604, Length=250, Percent_Identity=27.2, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17544670, Length=266, Percent_Identity=26.3157894736842, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17538480, Length=269, Percent_Identity=27.1375464684015, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17555706, Length=257, Percent_Identity=26.0700389105058, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21355319, Length=254, Percent_Identity=28.3464566929134, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24639444, Length=263, Percent_Identity=30.0380228136882, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI23397609, Length=263, Percent_Identity=31.1787072243346, Blast_Score=81, Evalue=6e-16,
Organism=Drosophila melanogaster, GI21357041, Length=262, Percent_Identity=29.3893129770992, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI28571526, Length=260, Percent_Identity=28.8461538461538, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI161076933, Length=183, Percent_Identity=30.6010928961749, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24584748, Length=183, Percent_Identity=30.6010928961749, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24644339, Length=261, Percent_Identity=26.8199233716475, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 27216; Mature: 27216

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLGLRGKRALVCGASKGLGFACADALAAEGVDVVIVARGAEALQEAAGRIRGAHGVRVE
CCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCCEEE
AVVADIATPEGRAEALLACQRLGGSPDILVTNAGGPPPGNFRDWGREAWLAALDANMLTP
EEEHHHCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCH
IELIKATVDPMIERGWGRIVNITSSAVKAPIDVLGLSNGARSGLTGFVAGLAREVARHGV
HHHHHHHHHHHHHHCCCEEEEECHHHHHCCHHHEECCCCCCCHHHHHHHHHHHHHHHCCC
TVNNLLPGPFETERLAKTLEAGARAAGVSAEAHYARRREANPARRFGQPAEFGAVCAFLC
EECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHH
SRQAGYLNAQNILLDGGAYPGTF
HCCCCCCCCCEEEEECCCCCCCC
>Mature Secondary Structure
MDLGLRGKRALVCGASKGLGFACADALAAEGVDVVIVARGAEALQEAAGRIRGAHGVRVE
CCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCCEEE
AVVADIATPEGRAEALLACQRLGGSPDILVTNAGGPPPGNFRDWGREAWLAALDANMLTP
EEEHHHCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCH
IELIKATVDPMIERGWGRIVNITSSAVKAPIDVLGLSNGARSGLTGFVAGLAREVARHGV
HHHHHHHHHHHHHHCCCEEEEECHHHHHCCHHHEECCCCCCCHHHHHHHHHHHHHHHCCC
TVNNLLPGPFETERLAKTLEAGARAAGVSAEAHYARRREANPARRFGQPAEFGAVCAFLC
EECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHH
SRQAGYLNAQNILLDGGAYPGTF
HCCCCCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]