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The map label for this gene is yicC [C]

Identifier: 17546875

GI number: 17546875

Start: 2339043

End: 2339978

Strand: Reverse

Name: yicC [C]

Synonym: RSc2156

Alternate gene names: 17546875

Gene position: 2339978-2339043 (Counterclockwise)

Preceding gene: 17546881

Following gene: 17546874

Centisome position: 62.96

GC content: 67.74

Gene sequence:

>936_bases
ATGATCCACAGCATGACCGGCTATGGCGTCGCCACGCGCCAGGCAGCCTTTACCGACCATAGCGGCGCCCCGTGCGACAA
CGTCGCCACCGTGTCGGTCGAATTCCGTACCGTCAACTCCCGCTTTCTGGATCTGCTGTTCCGTGCCCCGGAAGAGTGCC
GCGCCTTCGAGCCGGCCCTGCGCGAGATGCTGATGAGCGCACTGTCGCGCGGCAAGCTGGAATGCCGGATCAACCTGCAG
CGCCAGGAGGCCGCCGGCGATGTCGCGGCGCTCAATGTCGGCGTCCTGCAACAGTTGGCGACGCTGGAGCAGGAGGTCGC
GCGCCACCTGCCGGCTGCGGGCTCGTTGCGCATGGGCGAGGTCCTGCGCTGGCCGGGCGTGCTGGCCGAGCCCGAGCTGA
CGCAGGACGCGCTGCGCGAGGCGGTCACGGCCGCCGCGAAAGAGGCGTTGCAGCAACTTCTGGAATCCCGCCGCCGCGAA
GGCGAAGCGCTCAAGGCCATGTTGCTGGAGCGCGTCGATGCCATGCTGTCGATCGTCGAAGACCTGGTGCCGATGGTGCC
GAACCTGATCCAGCAACACCAGGACAAGCTGACCGAGCGCCTGCGCGAGGCCTTCGGTCTGGCCGCGCCCGACGGCACCC
CGGCGCTCACGCGCGACGAGCTCACCGAGCGCATCCGCCAGGAAGCCACCGTCTACGGCATCCGCATCGACATCGCCGAG
GAGCTCTCCCGGCTGCAGGCGCACCTGCGCGAGACGCGCCACATCCTGGAGAAGGGCGGCCAGATCGGCAAGCGGCTCGA
CTTCATGATGCAGGAGCTCAACCGCGAGGCGAACACGCTCGGCTCCAAGGCCGCCGCCAAAGAGCTGGCCGATGCCTCGA
TGGAGCTCAAGCTCCTGATCGAGCAGATGCGCGAGCAGGTCCAGAATCTCGAATAA

Upstream 100 bases:

>100_bases
CACACGTTGTAAAGCGACAAAAGGTGGGGGATCCCCTGCCAATTCCCCGGCTCGCCCGGCCCGCCCGAACCATCGATACG
CATAAGAAGACCACGATCTC

Downstream 100 bases:

>100_bases
CCACGCACCACGCAGAACAACAACATGCCTTCTTCCCAAGCGCACTCGGCGGTCGATACGCCCATCGAGAACCATTTTCC
CGGCAGCCTGTTCATGGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MIHSMTGYGVATRQAAFTDHSGAPCDNVATVSVEFRTVNSRFLDLLFRAPEECRAFEPALREMLMSALSRGKLECRINLQ
RQEAAGDVAALNVGVLQQLATLEQEVARHLPAAGSLRMGEVLRWPGVLAEPELTQDALREAVTAAAKEALQQLLESRRRE
GEALKAMLLERVDAMLSIVEDLVPMVPNLIQQHQDKLTERLREAFGLAAPDGTPALTRDELTERIRQEATVYGIRIDIAE
ELSRLQAHLRETRHILEKGGQIGKRLDFMMQELNREANTLGSKAAAKELADASMELKLLIEQMREQVQNLE

Sequences:

>Translated_311_residues
MIHSMTGYGVATRQAAFTDHSGAPCDNVATVSVEFRTVNSRFLDLLFRAPEECRAFEPALREMLMSALSRGKLECRINLQ
RQEAAGDVAALNVGVLQQLATLEQEVARHLPAAGSLRMGEVLRWPGVLAEPELTQDALREAVTAAAKEALQQLLESRRRE
GEALKAMLLERVDAMLSIVEDLVPMVPNLIQQHQDKLTERLREAFGLAAPDGTPALTRDELTERIRQEATVYGIRIDIAE
ELSRLQAHLRETRHILEKGGQIGKRLDFMMQELNREANTLGSKAAAKELADASMELKLLIEQMREQVQNLE
>Mature_311_residues
MIHSMTGYGVATRQAAFTDHSGAPCDNVATVSVEFRTVNSRFLDLLFRAPEECRAFEPALREMLMSALSRGKLECRINLQ
RQEAAGDVAALNVGVLQQLATLEQEVARHLPAAGSLRMGEVLRWPGVLAEPELTQDALREAVTAAAKEALQQLLESRRRE
GEALKAMLLERVDAMLSIVEDLVPMVPNLIQQHQDKLTERLREAFGLAAPDGTPALTRDELTERIRQEATVYGIRIDIAE
ELSRLQAHLRETRHILEKGGQIGKRLDFMMQELNREANTLGSKAAAKELADASMELKLLIEQMREQVQNLE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=311, Percent_Identity=36.9774919614148, Blast_Score=187, Evalue=8e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 34667; Mature: 34667

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHSMTGYGVATRQAAFTDHSGAPCDNVATVSVEFRTVNSRFLDLLFRAPEECRAFEPAL
CCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHCCHHHHHHHHHH
REMLMSALSRGKLECRINLQRQEAAGDVAALNVGVLQQLATLEQEVARHLPAAGSLRMGE
HHHHHHHHHCCCEEEEEECHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
VLRWPGVLAEPELTQDALREAVTAAAKEALQQLLESRRREGEALKAMLLERVDAMLSIVE
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLVPMVPNLIQQHQDKLTERLREAFGLAAPDGTPALTRDELTERIRQEATVYGIRIDIAE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEHHHH
ELSRLQAHLRETRHILEKGGQIGKRLDFMMQELNREANTLGSKAAAKELADASMELKLLI
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQMREQVQNLE
HHHHHHHHCCC
>Mature Secondary Structure
MIHSMTGYGVATRQAAFTDHSGAPCDNVATVSVEFRTVNSRFLDLLFRAPEECRAFEPAL
CCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHCCHHHHHHHHHH
REMLMSALSRGKLECRINLQRQEAAGDVAALNVGVLQQLATLEQEVARHLPAAGSLRMGE
HHHHHHHHHCCCEEEEEECHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
VLRWPGVLAEPELTQDALREAVTAAAKEALQQLLESRRREGEALKAMLLERVDAMLSIVE
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLVPMVPNLIQQHQDKLTERLREAFGLAAPDGTPALTRDELTERIRQEATVYGIRIDIAE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEHHHH
ELSRLQAHLRETRHILEKGGQIGKRLDFMMQELNREANTLGSKAAAKELADASMELKLLI
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQMREQVQNLE
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]