Click here to switch to the map view.

The map label for this gene is 17546849

Identifier: 17546849

GI number: 17546849

Start: 2310769

End: 2313081

Strand: Reverse

Name: 17546849

Synonym: RSc2130

Alternate gene names: NA

Gene position: 2313081-2310769 (Counterclockwise)

Preceding gene: 17546851

Following gene: 17546848

Centisome position: 62.24

GC content: 66.97

Gene sequence:

>2313_bases
GTGCCGACTGGCGAACAGCTGGTCGAATGCGAGCGGGCGCTGCTGCACTGCGCTGAATTCCAGCAGCTGCGCGCGCAGCA
TGTCAGCCGGCTGACGAAGCTTGCGGAAGATTCCCGGCTGCGCAAACAGGTGTCCGTTCACGAGTGTGTGGATCTGGCTT
GCGCCAACGTACTGGCCAAGCGCAACGGTTACGGTCTGGCGCTGGTTTTCCTGGCGGCAGGCGCGACGCCCGAAGAGAAT
GTGCGGCAGTTGACGAACTACTTCTTCGCGTTGCAAGCGGCCTCGCTCCGGGCCAGTCAGCCGGAACGGCGTCAGCTGGG
CCAATGCGCTGATCTCGCTGCGCACTATCTGTTCAAGACACCGTGGTTTGCGCGCGCGCCGTTGCGGCCATTCGTCATGC
TGGGCAACCTGCTGAGCAAATATCCCGACCACCCGGCCTGTCTGCAGGCGCTGTCGTGGATCGCCGATCAAGTCCTGGCG
CCTGCGCAGATGCCCGCTTTGGGCGAGAAAGACCTGGCCCTGTTGGCCAACGCCCTGTCGAAAAACAGCGGGTGCGGCCG
GAGCGAACAGGCGGTTGCGCGGATCGGCCGACATGTGGTGCGCGCAGGTGCGGGGGATTTTCGCGCGCAGAGCGTCAGCC
TGATGCTCAATGCCTGCAGCAAATGGTCCGGGAATGCCGATTGCCGGGATGCGGTTGAAGTCTTGGCCGCGCGCGTGTCG
GAGGATGCCGCCCTGCAGCGCGACATGGCCGCGCAGGCCGTCGCCAACGCACTCAATGCGCTGAGCAAGTGGCCGGAGCG
GATCGGGTGCCGGAATGCGGTCCTGGCCCTGGCCGTGCGCGTGGCGACCGATGTCGCTTTGCGGTGCCGCATGAAGCCCC
AGGAGGTGGCCAATGCGCTCAATGCGCTGAGCAAGTGGCCGGACCGGATCGAGTGCCGGAACGCGGTCCTCTCCCTCGCC
ACGCATGTGGGGGAGCATGGCACGCTGCGGCAGGCGATGAATGCGCAACACGTCGCGAATGCGCTCAATGCGTTGAGCAA
GTGGCCGGAGCAGGGCGAGTGCTGCGACGCCGCGCTGCCCCTGATCCGGCGCGTGGCGGACGATGCCGCGTTGCGGAGCA
GCATGGACGCACTGGTCACGTCCAACGTGCTCAATGCACTGAGCAAGTGGCCGGACCGGGTCGAGTGCCGGGATACCGCG
GTGACCCTGGCCTTGCGCGTGGCGGACGATGCCGGGTTGCGGCACGACATGGGCGTGCAGGCCGTGGCCAACGCGCTCAA
TGCGCTGAGCAAGTGGTCGGAGCAGGCAGGTTGCCGCGATGCGGCGCTGTCCCTGGCCGCGCGCATGGTGGGCGATGCCA
GCCTGCGGCACGCCATGAGCGCGCAGAATGTGGCCAACACGCTCAGCGCCCTGAGCAAGTGGCCGGAGCAGGCGGGTTGC
CGCGATGCGGTCTTGTCCCTGGCCGCGCGGGTCGCCGACGATGCCGCGCTGCGGCTCGACATGAACGCACAGAATGTCGC
GAACGTGCTCAACGCGTTGAGCAAGTGGCCGGAGCGCGGCGAGTGCCGGGATGCGATGCTGTCCCTGGCGCCGCGCGTGG
CGGACGATGCCGCGCTTCGATACGACATGAGCGCGCAGGCCGCCGCAAACGCGCTCAACGCGTTGAGCAAGTGGCCGGCG
CAAACGGGCTGCCGGGATGCGGCGCTGCGCCTGGCCGCGCGCGTGGCGGAGGACGCCGCCCTGCGGCACAGCATGGACGC
GCAACAGGTCGCCAACACGCTGAACGCGCTGAGCAAGTGGCCGGAGGCGTCTTCCTGCCGTCACGTCACCTTGTTGTTGA
TGCGATCGCTGGGCGAGTCGGGCTGTCCATGGCGCCAGTTCAACATGATCAATCTGGCCCAGATCGCCAATGCATCGGCG
CGTTTGTTCCTCTCGGCTTCCGATGAAGTCGAGATCCAGGCACTGGCGCGCACCAAGCTCAGGGCACTGGCGGCCCACCT
CGGCTTGCACCGGGAGCGCTTCGAGACGGCCTCCGCAAGCAGCATCGGTACGATCTTCAAGGCGATGGAGGCGCTGCAAC
TGCCGGCGGAAATGCGCTCGCTGGTCTGCGCTGCCATGAACCGGATCGAGCGCCTATGCAGCCAGGCCAGCTTGCGCAGC
GAGAGTCGGGAGTCACTCGGCATGCTCCGCGCGGGCTTGCTGCCGTACATCGACACAAACCGGGGCCTTTCCGATTCACC
CGGCATGTTGGAGGCCGCTGCGCCGCGACTGACGGCATGGGCTGCCCGGCATCGCCTGGAAATCGATCTTTAG

Upstream 100 bases:

>100_bases
ATCGGCTGCCGAGCCTGATGTTTCAACACCATTCCGCCATGACACCCAAGCGGGGCGGGTTGCCCCGGCATGCTCGGCTC
ATGGCGCTCAACGCGCGCTC

Downstream 100 bases:

>100_bases
GCGCGTGCGGCCCCGCGCGACATCGGGTTTGCCCCGCAGGCCGGGCGCCATCCGGCGAGCCCACGGCCCTGACATGACGT
GATCGCGACGTCTGCATTGG

Product: SKWP protein 6

Products: NA

Alternate protein names: Shikimate Kinase; Type III Effector; Type III Effector Protein Skwp-Related

Number of amino acids: Translated: 770; Mature: 769

Protein sequence:

>770_residues
MPTGEQLVECERALLHCAEFQQLRAQHVSRLTKLAEDSRLRKQVSVHECVDLACANVLAKRNGYGLALVFLAAGATPEEN
VRQLTNYFFALQAASLRASQPERRQLGQCADLAAHYLFKTPWFARAPLRPFVMLGNLLSKYPDHPACLQALSWIADQVLA
PAQMPALGEKDLALLANALSKNSGCGRSEQAVARIGRHVVRAGAGDFRAQSVSLMLNACSKWSGNADCRDAVEVLAARVS
EDAALQRDMAAQAVANALNALSKWPERIGCRNAVLALAVRVATDVALRCRMKPQEVANALNALSKWPDRIECRNAVLSLA
THVGEHGTLRQAMNAQHVANALNALSKWPEQGECCDAALPLIRRVADDAALRSSMDALVTSNVLNALSKWPDRVECRDTA
VTLALRVADDAGLRHDMGVQAVANALNALSKWSEQAGCRDAALSLAARMVGDASLRHAMSAQNVANTLSALSKWPEQAGC
RDAVLSLAARVADDAALRLDMNAQNVANVLNALSKWPERGECRDAMLSLAPRVADDAALRYDMSAQAAANALNALSKWPA
QTGCRDAALRLAARVAEDAALRHSMDAQQVANTLNALSKWPEASSCRHVTLLLMRSLGESGCPWRQFNMINLAQIANASA
RLFLSASDEVEIQALARTKLRALAAHLGLHRERFETASASSIGTIFKAMEALQLPAEMRSLVCAAMNRIERLCSQASLRS
ESRESLGMLRAGLLPYIDTNRGLSDSPGMLEAAAPRLTAWAARHRLEIDL

Sequences:

>Translated_770_residues
MPTGEQLVECERALLHCAEFQQLRAQHVSRLTKLAEDSRLRKQVSVHECVDLACANVLAKRNGYGLALVFLAAGATPEEN
VRQLTNYFFALQAASLRASQPERRQLGQCADLAAHYLFKTPWFARAPLRPFVMLGNLLSKYPDHPACLQALSWIADQVLA
PAQMPALGEKDLALLANALSKNSGCGRSEQAVARIGRHVVRAGAGDFRAQSVSLMLNACSKWSGNADCRDAVEVLAARVS
EDAALQRDMAAQAVANALNALSKWPERIGCRNAVLALAVRVATDVALRCRMKPQEVANALNALSKWPDRIECRNAVLSLA
THVGEHGTLRQAMNAQHVANALNALSKWPEQGECCDAALPLIRRVADDAALRSSMDALVTSNVLNALSKWPDRVECRDTA
VTLALRVADDAGLRHDMGVQAVANALNALSKWSEQAGCRDAALSLAARMVGDASLRHAMSAQNVANTLSALSKWPEQAGC
RDAVLSLAARVADDAALRLDMNAQNVANVLNALSKWPERGECRDAMLSLAPRVADDAALRYDMSAQAAANALNALSKWPA
QTGCRDAALRLAARVAEDAALRHSMDAQQVANTLNALSKWPEASSCRHVTLLLMRSLGESGCPWRQFNMINLAQIANASA
RLFLSASDEVEIQALARTKLRALAAHLGLHRERFETASASSIGTIFKAMEALQLPAEMRSLVCAAMNRIERLCSQASLRS
ESRESLGMLRAGLLPYIDTNRGLSDSPGMLEAAAPRLTAWAARHRLEIDL
>Mature_769_residues
PTGEQLVECERALLHCAEFQQLRAQHVSRLTKLAEDSRLRKQVSVHECVDLACANVLAKRNGYGLALVFLAAGATPEENV
RQLTNYFFALQAASLRASQPERRQLGQCADLAAHYLFKTPWFARAPLRPFVMLGNLLSKYPDHPACLQALSWIADQVLAP
AQMPALGEKDLALLANALSKNSGCGRSEQAVARIGRHVVRAGAGDFRAQSVSLMLNACSKWSGNADCRDAVEVLAARVSE
DAALQRDMAAQAVANALNALSKWPERIGCRNAVLALAVRVATDVALRCRMKPQEVANALNALSKWPDRIECRNAVLSLAT
HVGEHGTLRQAMNAQHVANALNALSKWPEQGECCDAALPLIRRVADDAALRSSMDALVTSNVLNALSKWPDRVECRDTAV
TLALRVADDAGLRHDMGVQAVANALNALSKWSEQAGCRDAALSLAARMVGDASLRHAMSAQNVANTLSALSKWPEQAGCR
DAVLSLAARVADDAALRLDMNAQNVANVLNALSKWPERGECRDAMLSLAPRVADDAALRYDMSAQAAANALNALSKWPAQ
TGCRDAALRLAARVAEDAALRHSMDAQQVANTLNALSKWPEASSCRHVTLLLMRSLGESGCPWRQFNMINLAQIANASAR
LFLSASDEVEIQALARTKLRALAAHLGLHRERFETASASSIGTIFKAMEALQLPAEMRSLVCAAMNRIERLCSQASLRSE
SRESLGMLRAGLLPYIDTNRGLSDSPGMLEAAAPRLTAWAARHRLEIDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 83221; Mature: 83090

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTGEQLVECERALLHCAEFQQLRAQHVSRLTKLAEDSRLRKQVSVHECVDLACANVLAK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNGYGLALVFLAAGATPEENVRQLTNYFFALQAASLRASQPERRQLGQCADLAAHYLFKT
CCCCCEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
PWFARAPLRPFVMLGNLLSKYPDHPACLQALSWIADQVLAPAQMPALGEKDLALLANALS
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
KNSGCGRSEQAVARIGRHVVRAGAGDFRAQSVSLMLNACSKWSGNADCRDAVEVLAARVS
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
EDAALQRDMAAQAVANALNALSKWPERIGCRNAVLALAVRVATDVALRCRMKPQEVANAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
NALSKWPDRIECRNAVLSLATHVGEHGTLRQAMNAQHVANALNALSKWPEQGECCDAALP
HHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LIRRVADDAALRSSMDALVTSNVLNALSKWPDRVECRDTAVTLALRVADDAGLRHDMGVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEECCCCCCCHHCCHH
AVANALNALSKWSEQAGCRDAALSLAARMVGDASLRHAMSAQNVANTLSALSKWPEQAGC
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCH
RDAVLSLAARVADDAALRLDMNAQNVANVLNALSKWPERGECRDAMLSLAPRVADDAALR
HHHHHHHHHHHHCCHHEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
YDMSAQAAANALNALSKWPAQTGCRDAALRLAARVAEDAALRHSMDAQQVANTLNALSKW
HCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
PEASSCRHVTLLLMRSLGESGCPWRQFNMINLAQIANASARLFLSASDEVEIQALARTKL
CCCCCCHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHH
RALAAHLGLHRERFETASASSIGTIFKAMEALQLPAEMRSLVCAAMNRIERLCSQASLRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
ESRESLGMLRAGLLPYIDTNRGLSDSPGMLEAAAPRLTAWAARHRLEIDL
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PTGEQLVECERALLHCAEFQQLRAQHVSRLTKLAEDSRLRKQVSVHECVDLACANVLAK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNGYGLALVFLAAGATPEENVRQLTNYFFALQAASLRASQPERRQLGQCADLAAHYLFKT
CCCCCEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
PWFARAPLRPFVMLGNLLSKYPDHPACLQALSWIADQVLAPAQMPALGEKDLALLANALS
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
KNSGCGRSEQAVARIGRHVVRAGAGDFRAQSVSLMLNACSKWSGNADCRDAVEVLAARVS
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
EDAALQRDMAAQAVANALNALSKWPERIGCRNAVLALAVRVATDVALRCRMKPQEVANAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
NALSKWPDRIECRNAVLSLATHVGEHGTLRQAMNAQHVANALNALSKWPEQGECCDAALP
HHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LIRRVADDAALRSSMDALVTSNVLNALSKWPDRVECRDTAVTLALRVADDAGLRHDMGVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEECCCCCCCHHCCHH
AVANALNALSKWSEQAGCRDAALSLAARMVGDASLRHAMSAQNVANTLSALSKWPEQAGC
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCH
RDAVLSLAARVADDAALRLDMNAQNVANVLNALSKWPERGECRDAMLSLAPRVADDAALR
HHHHHHHHHHHHCCHHEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
YDMSAQAAANALNALSKWPAQTGCRDAALRLAARVAEDAALRHSMDAQQVANTLNALSKW
HCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
PEASSCRHVTLLLMRSLGESGCPWRQFNMINLAQIANASARLFLSASDEVEIQALARTKL
CCCCCCHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHH
RALAAHLGLHRERFETASASSIGTIFKAMEALQLPAEMRSLVCAAMNRIERLCSQASLRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
ESRESLGMLRAGLLPYIDTNRGLSDSPGMLEAAAPRLTAWAARHRLEIDL
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA